Pre_GI: BLASTP Hits

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Query: NC_011000:1262324:1291883 Burkholderia cenocepacia J2315 chromosome 1, complete sequence

Start: 1291883, End: 1292545, Length: 663

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012792:627500:631815631815632462648Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, TetR family6e-52203
NC_010552:2331486:234899723489972349671675Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, TetR family8e-39160
NC_010515:2037825:203968620396862040360675Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family8e-39160
NC_010125:148500:164714164714165385672Gluconacetobacter diazotrophicus PAl 5, complete genometranscriptional regulator, TetR family2e-38159
NC_008786:18688:243492434924993645Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, TetR family5e-38157
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator1e-32139
NC_014837:2758239:275953327595332760171639Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator9e-32136
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family2e-2099.4
NC_007953:1088933:110242611024261103058633Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family5e-2097.8
NC_009253:3317533:332094233209423321559618Desulfotomaculum reducens MI-1 chromosome, complete genomeTetR family transcriptional regulator2e-1892.8
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family4e-1891.3
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family2e-1582.4
NC_017506:1:166661666617247582Marinobacter adhaerens HP15 chromosome, complete genomeTetR family transcriptional regulator4e-1478.2
NC_016113:1143580:116014911601491160748600Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceTetR family regulatory protein5e-1271.2
NC_009664:4377777:438361543836154384193579Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family8e-1270.5
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator5e-1167.8
NC_000916:952663:968930968930969556627Methanothermobacter thermautotrophicus str. Delta H, completetranscriptional regulator related protein7e-1063.9
NC_011881:89705:917219172192311591Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, TetR family2e-0962.8
NC_020064:3998715:402243940224394023026588Serratia marcescens FGI94, complete genometranscriptional regulator2e-0962.4
NC_016816:2953530:298857429885742989209636Pantoea ananatis LMG 5342, complete genomeHTH-type transcriptional regulator RutR2e-0962.4
NC_015422:3366500:336988733698873370549663Alicycliphilus denitrificans K601 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein2e-0859.3
NC_007384:1086025:111171911117191112357639Shigella sonnei Ss046, complete genomeputative tet operon regulator2e-0859.3
NC_007802:2026500:204021520402152040865651Jannaschia sp. CCS1, complete genometranscriptional regulator, TetR family2e-0859.3
NC_008800:2127918:213056121305612131229669Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,TetR family transcriptional regulator3e-0858.9
NC_014831:1843835:186181618618161862391576Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein TetR3e-0858.5
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family3e-0858.5
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway5e-0858.2
NC_013209:2337204:236647023664702367123654Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR6e-0857.8
NC_017100:2339826:236909223690922369745654Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator TetR6e-0857.8
NC_017108:2337163:236642923664292367082654Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator TetR6e-0857.8
NC_017111:2337181:236644723664472367100654Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator TetR6e-0857.8
NC_017121:2337168:236643423664342367087654Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator TetR6e-0857.8
NC_017125:2339806:236907223690722369725654Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator TetR6e-0857.8
NC_017146:2339848:236911423691142369767654Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator TetR6e-0857.8
NC_017150:2244950:227421622742162274869654Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator TetR6e-0857.8
NC_009436:1679265:169231516923151692953639Enterobacter sp. 638, complete genomeTetR family transcriptional regulator6e-0857.8
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0857.8
NC_012125:2646792:266813126681312668769639Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator5e-0857.8
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome8e-0857.4
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator7e-0857.4
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator7e-0857.4
NC_010512:734834:736231736231736884654Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, TetR family1e-0756.6
NC_018515:4474000:447872144787214479305585Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-0756.2
NC_008228:4696338:470983347098334710468636Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, TetR family2e-0755.8
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator2e-0755.5
NC_020063:2785652:279097727909772791615639Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator2e-0755.5
NC_007946:4779745:480969748096974810536840Escherichia coli UTI89, complete genomeUidR transriptional regulator4e-0755.1
NC_008253:3941938:396844639684463969285840Escherichia coli 536, complete genomeputative transcription regulator protein4e-0755.1
NC_015224:1641819:164285416428541643564711Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative DNA-binding transcriptional regulator4e-0755.1
NC_008268:5745620:575548057554805756157678Rhodococcus sp. RHA1, complete genometranscriptional regulator, TetR family4e-0755.1
NC_008062:370902:372299372299372952654Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0755.1
NC_008544:348500:350119350119350772654Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0755.1
NC_007509:1383013:138503413850341385687654Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family4e-0754.7
NC_004193:375416:552830552830553441612Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator6e-0754.3
NC_016582:6448430:647126964712696471865597Streptomyces bingchenggensis BCW-1 chromosome, complete genometetR family regulatory protein8e-0753.9
NC_017904:2724941:272761627276162728188573Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator1e-0653.5
NC_015224:2061951:206528820652882065869582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,TetR family transcriptional regulator1e-0653.5
NC_021184:1024305:104149110414911042111621Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator1e-0653.5
NC_009254:23000:259202592026573654Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTetR family transcriptional regulator9e-0753.5
NC_019673:7598026:760271776027177603478762Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family9e-0753.5
NC_006361:3615322:361669536166953617288594Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator9e-0753.5
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator1e-0653.1
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family1e-0653.1
NC_008563:4707826:472109047210904721461372Escherichia coli APEC O1, complete genomeputative transcriptional repressor3e-0652.4
NC_015593:2696000:269923826992382699945708Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeregulatory protein TetR3e-0652
NC_002944:1881405:189334518933451893992648Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0652
NC_017904:2724941:274766527476652748234570Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family3e-0652
NC_011663:1627220:163153716315371632163627Shewanella baltica OS223 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein4e-0651.6
NC_008595:2546696:258079325807932581404612Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein4e-0651.6
NC_013715:193647:206119206119206739621Rothia mucilaginosa DY-18, complete genometranscriptional regulator5e-0651.2
NC_010506:537833:555196555196555801606Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, TetR family5e-0651.2
NC_004431:4319152:432716243271624327731570Escherichia coli CFT073, complete genomehypothetical protein5e-0651.2
NC_015563:4383000:440362344036234404303681Delftia sp. Cs1-4 chromosome, complete genomeTetracycline transcriptional regulator YcdC domain-containing protein8e-0650.8
NC_003030:3871658:389192338919233892513591Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, AcrR family7e-0650.8
NC_011745:3405520:341233534123353412706372Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-0650.8
NC_016111:2257166:227095022709502271552603Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator6e-0650.8
NC_014814:1425500:142553014255301426126597Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family6e-0650.8
NC_015376:2241000:224550722455072246205699Burkholderia gladioli BSR3 chromosome chromosome 2, completeTetR family transcriptional regulator9e-0650.4