Pre_GI: BLASTP Hits

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Query: NC_010673:291679:295147 Borrelia hermsii DAH, complete genome

Start: 295147, End: 295932, Length: 786

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:294437294437295222786Borrelia turicatae 91E135, complete genomechemotaxis MotA protein3e-131468
NC_011728:269853:291794291794292576783Borrelia burgdorferi ZS7, complete genomechemotaxis protein MotA2e-120431
NC_001318:270488:292426292426293208783Borrelia burgdorferi B31, complete genomeflagellar motor rotation protein A (motA)2e-120431
NC_015921:272517:290975290975291757783Borrelia bissettii DN127 chromosome, complete genomemotility protein A6e-120429
NC_008277:272741:291296291296292078783Borrelia afzelii PKo, complete genomeflagellar motor rotation protein A6e-119426
NC_017238:272980:291535291535292317783Borrelia afzelii PKo chromosome, complete genomemotility protein A6e-119426
NC_006156:271410:291194291194291976783Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor rotation protein A3e-118424
NC_010520:2860960:286559828655982866410813Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis MotA protein1e-54213
NC_009698:2649453:265409026540902654902813Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein MotA2e-54213
NC_009697:2714668:271716327171632717975813Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis MotA protein2e-54213
NC_008593:1103293:111936511193651120174810Clostridium novyi NT, complete genomechemotaxis motA protein1e-48192
NC_010674:858397:869037869037869852816Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis protein MotA2e-46185
NC_019978:625476:641096641096641896801Halobacteroides halobius DSM 5150, complete genomeflagellar motor component3e-46185
NC_018604:2303239:230910623091062309897792Brachyspira pilosicoli WesB complete genomeflagellar Motor Protein MotA3e-44178
NC_018607:2184832:219069921906992191490792Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar Motor Protein MotA3e-44178
NC_014330:841841:849772849772850563792Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar Motor Protein MotA3e-44178
NC_000919:773784:790896790896791675780Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor rotation protein (motA)8e-44177
NC_015714:768500:785778785778786557780Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeMot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_010741:775000:792344792344793123780Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor rotation protein8e-44177
NC_016842:775368:792480792480793259780Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_016843:775371:792667792667793446780Treponema pallidum subsp. pertenue str. Gauthier chromosome,Mot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_016844:775334:792834792834793613780Treponema pallidum subsp. pallidum DAL-1 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_016848:775822:792934792934793713780Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_017268:775000:792146792146792925780Treponema pallidum subsp. pallidum str. Chicago chromosome,chemotaxis protein MotA8e-44177
NC_021508:775264:792376792376793155780Treponema pallidum subsp. pallidum SS14, complete genomeMot family proton (H+) or sodium (Na+) transporter MotA8e-44177
NC_009633:2725128:272849727284972729285789Alkaliphilus metalliredigens QYMF chromosome, complete genomeMotA/TolQ/ExbB proton channel4e-43174
NC_010723:833870:847357847357848160804Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis protein MotA4e-43174
NC_018664:1663324:167440216744021675190789Clostridium acidurici 9a chromosome, complete genomeMotA/TolQ/ExbB proton channel family protein2e-42172
NC_016751:1979201:198994019899401990710771Marinitoga piezophila KA3 chromosome, complete genomeflagellar motor component1e-39163
NC_015172:2628128:267446326744632675242780Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMotA/TolQ/ExbB proton channel2e-39162
NC_015391:2059191:207982720798272080636810Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor protein MotP5e-38157
UCMB5137:2418403:244177724417772442598822Bacillus atrophaeus UCMB-5137flagellar motor protein MotP3e-37155
NC_012881:3727150:374471337447133745468756Desulfovibrio salexigens DSM 2638, complete genomecyclic nucleotide-binding protein5e-37154
NC_007519:3527207:354634235463423547106765Desulfovibrio alaskensis G20 chromosome, complete genomechemotaxis protein MotA9e-37153
NC_013223:685628:702670702670703455786Desulfohalobium retbaense DSM 5692, complete genomeMotA/TolQ/ExbB proton channel7e-36150
NC_009698:2265475:228469222846922285477786Clostridium botulinum A str. Hall chromosome, complete genomeflagellar motor protein MotA2e-35149
NC_007907:321537:338629338629339420792Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-35148
NC_019903:223843:225842225842226633792Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,flagellar motor component4e-35148
NC_020409:437781:451490451490452245756Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeChemotaxis protein PomA8e-35147
NC_016803:465453:465453465453466205753Desulfovibrio desulfuricans ND132 chromosome, complete genomeMotA/TolQ/ExbB proton channel2e-33142
NC_019897:3810000:382843938284393829254816Thermobacillus composti KWC4 chromosome, complete genomeflagellar motor component4e-33141
NC_007493:1929000:195175719517571952518762Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceFlagellar motor protein MotA2e-32139
NC_016894:2931213:294080829408082941653846Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor protein MotA4e-32138
NC_020911:2921925:297115429711542971915762Octadecabacter antarcticus 307, complete genomechemotaxis protein motA1e-31137
NC_010723:3530000:357390435739043574680777Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis protein MotA2e-31136
NC_017195:1411936:141193614119361412748813Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completechemotaxis protein motA1e-30133
NC_013722:1577818:159776815977681598508741Xanthomonas albilineans, complete genomeprobable flagellar motor protein1e-29130
NC_014393:187454:200647200647201429783Clostridium cellulovorans 743B chromosome, complete genomeMotA/TolQ/ExbB proton channel1e-29130
NC_009617:4911595:493013749301374930925789Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeMotA/TolQ/ExbB proton channel3e-29129
NC_016745:1257397:127423312742331274988756Oceanimonas sp. GK1 chromosome, complete genomeflagellar motor protein PomA2e-29129
NC_010674:3674739:371651937165193717295777Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis protein MotA2e-29129
NC_002973:730942:734145734145734996852Listeria monocytogenes str. 4b F2365, complete genomeflagellar motor protein2e-29129
NC_013766:757987:757176757176758027852Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar motor protein MotA2e-29129
NC_013768:721897:723880723880724731852Listeria monocytogenes 08-5923, complete genomeflagellar motor protein MotA2e-29129
NC_007508:2234080:223584522358452236585741Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar motor protein2e-29129
NC_010688:2532929:253292925329292533669741Xanthomonas campestris pv. campestris, complete genomeFlagellar motor component MotA4e-29128
NC_009664:533021:542620542620543393774Kineococcus radiotolerans SRS30216, complete genomeMotA/TolQ/ExbB proton channel1e-28126
NC_017271:2221370:222436222243622225075714Xanthomonas campestris pv. raphani 756C chromosome, completeMotA protein1e-28126
NC_003902:2211790:221277222127722213512741Xanthomonas campestris pv. campestris str. ATCC 33913, completeflagellar motor protein2e-28125
NC_008789:350650:389695389695390561867Halorhodospira halophila SL1, complete genomeMotA/TolQ/ExbB proton channel4e-27122
NC_006177:3192500:319627031962703197067798Symbiobacterium thermophilum IAM 14863, complete genomeflagellar motor protein MotA4e-27121
NC_007298:778723:816974816974817714741Dechloromonas aromatica RCB, complete genomeflagellar motor protein1e-26120
NC_014483:4740214:474544847454484746275828Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-26120
NC_009512:1691930:171733617173361718076741Pseudomonas putida F1, complete genomeMotA/TolQ/ExbB proton channel2e-26119
NC_017986:4374979:440037644003764401125750Pseudomonas putida ND6 chromosome, complete genomeflagellar motor protein2e-26119
NC_015687:303810:357953357953358741789Clostridium acetobutylicum DSM 1731 chromosome, complete genomechemotaxis motility protein A, motA4e-26118
NC_003030:303812:357957357957358745789Clostridium acetobutylicum ATCC 824, complete genomeChemotaxis motility protein A, gene motA4e-26118
NC_016641:872394:877625877625878452828Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-25116
NC_015222:1127675:112933911293391130097759Nitrosomonas sp. AL212 chromosome, complete genomeMotA/TolQ/ExbB proton channel1e-23110
NC_015740:2614317:263929826392982640107810Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completechemotaxis protein MotA2e-2099.8
NC_012108:4118888:412035641203564121252897Desulfobacterium autotrophicum HRM2, complete genomeMotA31e-1997.1
NC_009654:3849774:386528838652883866025738Marinomonas sp. MWYL1, complete genomeMotA/TolQ/ExbB proton channel8e-1994
NC_012491:5628000:563266656326665633475810Brevibacillus brevis NBRC 100599, complete genomeputative chemotaxis protein6e-1684.7
NC_011126:555483:565972565972566706735Hydrogenobaculum sp. Y04AAS1, complete genomeMotA/TolQ/ExbB proton channel7e-1684.3
NC_007953:1434705:145250714525071453271765Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative flagellar motor protein (MotA)8e-1477.8
NC_017059:31564:592015920160016816Rhodospirillum photometricum DSM 122, complete genomeMotA/TolQ/ExbB proton channel3e-1375.5
NC_008543:582129:586513586513587277765Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceMotA/TolQ/ExbB proton channel4e-1272
NC_011001:854713:859100859100859864765Burkholderia cenocepacia J2315 chromosome 2, complete sequencechemotaxis protein PomA4e-1272
NC_015578:2341026:2358771235877123611882418Treponema primitia ZAS-2 chromosome, complete genomeleucine Rich Repeat domain-containing protein4e-0652