Pre_GI: BLASTP Hits

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Query: NC_010501:3987615:3994988 Pseudomonas putida W619, complete genome

Start: 3994988, End: 3995743, Length: 756

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009255:1369200:138016213801621380944783Burkholderia vietnamiensis G4 chromosome 2, complete sequenceKilA domain-containing protein3e-26119
NC_007712:3382000:339766133976613398446786Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein1e-21103
NC_004431:3040953:305504030550403055837798Escherichia coli CFT073, complete genomehypothetical protein2e-21103
NC_008563:5011997:501540750154075015895489Escherichia coli APEC O1, complete genomehypothetical protein3e-21102
NC_011740:4520373:452288545228854523682798Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin3e-21102
NC_011742:4962008:496541849654184966215798Escherichia coli S88 chromosome, complete genomehypothetical protein3e-21102
NC_011750:5045927:506570550657055066514810Escherichia coli IAI39 chromosome, complete genomeputative KilA protein; KilA-N domain1e-1996.7
NC_012731:2083650:210549521054952106424930Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-1893.6
NC_010658:1933605:195934419593441960153810Shigella boydii CDC 3083-94, complete genomeKilA-N domain family3e-1892
NC_004129:4333302:434784043478404348646807Pseudomonas fluorescens Pf-5, complete genomeSb462e-1789.7
NC_020418:2910593:291160929116092912400792Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-1788.2
NC_017033:2081206:210655121065512107522972Frateuria aurantia DSM 6220 chromosome, complete genomeKilA-N domain-containing protein1e-1686.7
NC_009783:1956000:196037119603711961039669Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-1374.7
NC_016809:389561:400953400953401570618Haemophilus influenzae 10810, complete genomehypothetical protein7e-1374.3
NC_016809:1778000:178929117892911789944654Haemophilus influenzae 10810, complete genomehypothetical protein1e-1273.6
NC_021066:2197490:221820522182052218735531Raoultella ornithinolytica B6, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain-containing protein5e-1271.6
NC_013941:5317424:532038753203875321202816Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKilA-N domain family2e-1169.7
NC_015761:1017301:102664110266411027171531Salmonella bongori NCTC 12419, complete genomephage protein4e-1168.6
NC_013850:1887556:192385919238591924389531Klebsiella variicola At-22 chromosome, complete genomeKilA, N-terminal/APSES-type HTH DNA-binding domain protein6e-1167.8
NC_010002:3547958:355671035567103557489780Delftia acidovorans SPH-1, complete genomeKilA domain protein1e-1066.6
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W2e-1066.2
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein2e-1066.2
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein2e-1066.2
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi2e-1066.2
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein2e-1065.9
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W2e-1065.9
NC_013364:3312379:333186433318643332343480Escherichia coli O111:H- str. 11128, complete genome5e-1064.7
NC_009654:615504:627619627619628347729Marinomonas sp. MWYL1, complete genomeKilA domain-containing protein5e-1064.7
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein1e-0963.9
NC_000964:2146000:219877621987762199531756Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0860.1
NC_007712:1219957:121995712199571220757801Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0859.7
NC_017188:1172181:124543412454341246141708Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA-binding protein anti-repressor; phage SPbeta5e-0858.5
NC_017191:1173989:124701112470111247718708Bacillus amyloliquefaciens XH7 chromosome, complete genomeDNA-binding protein anti-repressor5e-0858.5
NC_003210:2380419:239645423964542397230777Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-0858.5
NC_017190:2130651:221174522117452212497753Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived antirepressor protein yoqD5e-0858.2
NC_020272:2748733:279414927941492794877729Bacillus amyloliquefaciens IT-45, complete genomeProtein kilA2e-0755.8
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor3e-0755.5
NC_012779:2184927:219289221928922193452561Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0653.9
NC_011660:2924397:292850229285022929290789Listeria monocytogenes HCC23 chromosome, complete genomephage anti-repressor1e-0653.9
NC_014136:329484:367054367054367797744Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein4e-0652
NC_011094:593100:619506619506620003498Salmonella enterica subsp. enterica serovar Schwarzengrund strKilA-N domain family protein6e-0651.2
NC_010163:614634:618914618914619660747Acholeplasma laidlawii PG-8A chromosome, complete genomephage proteinputative antirepressor7e-0651.2