Pre_GI: BLASTP Hits

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Query: NC_010501:1868888:1891645 Pseudomonas putida W619, complete genome

Start: 1891645, End: 1893015, Length: 1371

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:2720183:2740793274079327421031311Pseudomonas putida S16 chromosome, complete genomemajor facilitator transporter5e-120431
NC_015563:313283:3315923315923328871296Delftia sp. Cs1-4 chromosome, complete genomemajor facilitator superfamily protein2e-68260
NC_011894:6708970:6719363671936367206821320Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_11e-61237
NC_010511:6067000:6073342607334260746941353Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter2e-57223
NC_014119:977136:9909849909849923121329Burkholderia sp. CCGE1002 chromosome chromosome 3, completemajor facilitator superfamily MFS_15e-56219
NC_015379:3736500:3757402375740237587031302Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transport system membrane protein, Major Facilitator Superfamily5e-55215
NC_010623:1961685:2009286200928620105991314Burkholderia phymatum STM815 chromosome 2, complete sequencemajor facilitator superfamily MFS_13e-54213
NC_012660:2143376:2185498218549821867961299Pseudomonas fluorescens SBW25 chromosome, complete genomeputative transporter-like membrane protein6e-54211
NC_015136:1101725:1129876112987611312161341Burkholderia sp. CCGE1001 chromosome 1, complete sequencemajor facilitator superfamily protein2e-53210
NC_009077:4810379:4828778482877848300911314Mycobacterium sp. JLS, complete genomemajor facilitator superfamily MFS_12e-53210
NC_007907:5404608:5412450541245054137661317Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-52207
NC_008390:2448379:2447031244703124483921362Burkholderia cepacia AMMD chromosome 1, complete sequencemajor facilitator superfamily MFS_16e-52205
NC_017047:2957957:2957957295795729592731317Rahnella aquatilis HX2 chromosome, complete genomemajor facilitator superfamily protein8e-52204
NC_015061:2927707:2927707292770729290231317Rahnella sp. Y9602 chromosome, complete genomemajor facilitator superfamily MFS_18e-52204
NC_007348:752692:7599017599017612381338Ralstonia eutropha JMP134 chromosome 2, complete sequenceGeneral substrate transporter:Major facilitator superfamily MFS_12e-51203
NC_009138:2110500:2119033211903321203851353Herminiimonas arsenicoxydans, complete genomeputative permease1e-50201
NC_010511:2079744:2103306210330621046131308Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter5e-50198
NC_010501:4989455:5002132500213250034961365Pseudomonas putida W619, complete genomemajor facilitator superfamily MFS_12e-49196
NC_007626:3393940:3439261343926134405741314Magnetospirillum magneticum AMB-1, complete genomePermease of the major facilitator superfamily3e-49196
NC_013446:1648556:1677569167756916789121344Comamonas testosteroni CNB-2, complete genomemajor facilitator superfamily MFS_15e-49195
NC_015733:1976752:1995391199539119967191329Pseudomonas putida S16 chromosome, complete genomeputative transport-related membrane protein1e-48194
NC_017986:2687588:2692363269236326936641302Pseudomonas putida ND6 chromosome, complete genomemajor facilitator transporter3e-48193
NC_015567:2420169:2432880243288024341871308Serratia sp. AS9 chromosome, complete genomemajor facilitator superfamily protein5e-48192
NC_015566:2420287:2432998243299824343051308Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein5e-48192
NC_009512:5632591:5650548565054856518791332Pseudomonas putida F1, complete genomemajor facilitator superfamily MFS_14e-48192
NC_009512:5920960:5924343592434359256441302Pseudomonas putida F1, complete genomemajor facilitator superfamily MFS_13e-48192
NC_010511:1074557:1113481111348111148091329Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter8e-48191
NC_009255:1071868:1080974108097410823201347Burkholderia vietnamiensis G4 chromosome 2, complete sequenced-galactonate transporter1e-47191
NC_010086:1907959:1934057193405719354031347Burkholderia multivorans ATCC 17616 chromosome 2, completed-galactonate transporter1e-47191
NC_010805:530876:5399015399015412471347Burkholderia multivorans ATCC 17616 chromosome 2, completephthalate transporter1e-47191
NC_012856:2931995:2951703295170329530491347Ralstonia pickettii 12D chromosome 1, complete genomed-galactonate transporter3e-47189
NC_009255:1105786:1122773112277311241071335Burkholderia vietnamiensis G4 chromosome 2, complete sequenced-galactonate transporter2e-46187
NC_015726:3280000:3293825329382532950361212Cupriavidus necator N-1 chromosome 1, complete sequencemajor facilitator superfamily protein1e-46187
NC_011894:1499229:1524681152468115259791299Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_16e-46185
NC_020418:1841138:1855503185550318567891287Morganella morganii subsp. morganii KT, complete genomeNitrate/nitrite transporter9e-45181
NC_004129:4434259:4439153443915344404721320Pseudomonas fluorescens Pf-5, complete genomemajor facilitator family transporter2e-44180
NC_015583:4879:1215712157134761320Novosphingobium sp. PP1Y plasmid Mpl, complete sequencemajor facilitator transporter2e-44180
NC_015381:1892546:1908000190800019093131314Burkholderia gladioli BSR3 chromosome 1, complete sequenceMajor facilitator superfamily MFS_15e-44179
NC_010612:681544:6970886970886984221335Mycobacterium marinum M, complete genomeconserved integral membrane transport protein9e-44178
NC_014258:127500:1343101343101356501341Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative MFS transport protein8e-44178
NC_010511:6169468:6169468616946861707931326Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter6e-44178
NC_017281:433995:4511714511714524571287Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomeTransmembrane transport protein1e-43177
NC_003912:472000:4892024892024904881287Campylobacter jejuni RM1221, complete genometartrate transporter, putative1e-43177
NC_010552:752007:7712577712577725431287Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemajor facilitator superfamily MFS_11e-43177
NC_015723:384000:4001804001804014661287Cupriavidus necator N-1 chromosome 2, complete sequenceACS family major facilitator superfamily protein2e-43176
NC_014640:4031336:4060862406086240621901329Achromobacter xylosoxidans A8 chromosome, complete genomemajor facilitator protein2e-42173
NC_011000:3362382:3377332337733233786721341Burkholderia cenocepacia J2315 chromosome 1, complete sequencemajor facilitator superfamily protein3e-42173
NC_007951:925442:9429429429429442881347Burkholderia xenovorans LB400 chromosome 1, complete sequenceMajor facilitator superfamily (MFS) metabolite/H+ symporter6e-42172
NC_015733:1976752:2000007200000720013411335Pseudomonas putida S16 chromosome, complete genomemajor facilitator superfamily permease5e-42172
NC_008061:2773670:2777240277724027785621323Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemajor facilitator superfamily MFS_14e-42172
NC_008543:2474002:2488445248844524897671323Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemajor facilitator superfamily MFS_14e-42172
NC_010505:4396800:4399859439985944011841326Methylobacterium radiotolerans JCM 2831, complete genomemajor facilitator superfamily MFS_17e-42171
NC_020829:636773:6526256526256539531329Pseudomonas denitrificans ATCC 13867, complete genomemajor facilitator superfamily protein1e-41171
NC_010515:1900967:1904537190453719058591323Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemajor facilitator superfamily MFS_12e-41170
NC_011740:810411:8107858107858121701386Escherichia fergusonii ATCC 35469, complete genomeputative tartrate transporter1e-40167
NC_007953:1088933:1096135109613510974661332Burkholderia xenovorans LB400 chromosome 3, complete sequencemajor facilitator superfamily (MFS) anion(metabolite)/cation symporter3e-40166
NC_017279:437665:455697455697456650954Campylobacter jejuni subsp. jejuni IA3902 chromosome, completehypothetical protein8e-40165
NC_015723:384000:3959523959523972951344Cupriavidus necator N-1 chromosome 2, complete sequencetartrate transporter TtuB1e-39164
NC_011894:957897:9645409645409658741335Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_14e-39162
NC_010511:871905:8872578872578885761320Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter4e-39162
NC_010086:1816378:1817576181757618190001425Burkholderia multivorans ATCC 17616 chromosome 2, completemajor facilitator superfamily MFS_14e-39162
NC_012962:1041518:1065002106500210663781377Photorhabdus asymbiotica, complete genomehypothetical 4-hydroxyphenylacetate permease (hpax)2e-38160
NC_011894:2503639:2505952250595225073041353Methylobacterium nodulans ORS 2060, complete genomemajor facilitator superfamily MFS_11e-38160
NC_015381:1623587:1674911167491116763861476Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-38159
NC_014307:2760347:2758989275898927603501362Ralstonia solanacearum CFBP2957 chromosome, complete genometransport protein (mfs superfamily); tartrate transporter9e-38158
NC_015381:4182194:4197904419790441992141311Burkholderia gladioli BSR3 chromosome 1, complete sequencemajor facilitator superfamily protein1e-37157
NC_009078:142794:1614351614351627601326Burkholderia pseudomallei 1106a chromosome II, complete sequencemajor facilitator family transporter1e-37157
NC_006351:142788:1614171614171627421326Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransport system, membrane protein1e-37157
NC_007435:1981164:1999964199996420012891326Burkholderia pseudomallei 1710b chromosome II, complete sequenceMFS transporter1e-37157
NC_010552:2089140:2110942211094221122821341Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemajor facilitator superfamily MFS_14e-37156
NC_008314:1559102:1569751156975115711421392Ralstonia eutropha H16 chromosome 2, complete sequenceMFS transporter, ACS family1e-36154
NC_015137:2616222:2629654262965426310001347Burkholderia sp. CCGE1001 chromosome 2, complete sequencemajor facilitator superfamily protein2e-36153
NC_015186:2165628:2186524218652421878281305Acidiphilium multivorum AIU301, complete genomeputative major facilitator superfamily transporter2e-36153
NC_008543:2220698:2234715223471522360401326Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemajor facilitator superfamily MFS_12e-35150
NC_010515:2111691:2167947216794721692721326Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemajor facilitator superfamily MFS_12e-35150
NC_008061:190287:2436292436292449541326Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemajor facilitator superfamily MFS_12e-35150
NC_015663:4347187:4352398435239843537801383Enterobacter aerogenes KCTC 2190 chromosome, complete genome4-hydroxyphenylacetate transporter2e-34147
NC_020181:1057476:1069358106935810707401383Enterobacter aerogenes EA1509E, complete genome4-hydroxyphenylacetate symporter, major facilitator superfamily (MFS)3e-34146
NC_005085:1269787:1280343128034312816381296Chromobacterium violaceum ATCC 12472, complete genomeprobable permease transmembrane protein9e-34145
NC_016935:3819500:3827797382779738291311335Paenibacillus mucilaginosus 3016 chromosome, complete genomemajor facilitator superfamily transporter3e-33143
NC_015690:3269000:3277358327735832786921335Paenibacillus mucilaginosus KNP414 chromosome, complete genomemajor facilitator transporter3e-33143
NC_014479:2505823:2528257252825725295941338Bacillus subtilis subsp. spizizenii str. W23 chromosome, completemajor facilitator superfamily transporter5e-33142
NC_015376:2061990:2064151206415120654821332Burkholderia gladioli BSR3 chromosome chromosome 2, completeMFS superfamily tartrate symporter7e-33142
NC_012214:1212616:1233260123326012345791320Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein YfeY2e-32140
NC_008786:3915000:391781439178143918734921Verminephrobacter eiseniae EF01-2, complete genomemajor facilitator superfamily MFS_13e-32139
NC_017068:2827568:2849153284915328504931341Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative major facilitator superfamily transporter3e-30133
NC_014328:1596016:1601872160187216031881317Clostridium ljungdahlii ATCC 49587 chromosome, complete genomemajor facilitator family transporter8e-30131
NC_015677:3787419:3795058379505837963591302Ramlibacter tataouinensis TTB310 chromosome, complete genometartrate transporter1e-26120
NC_016768:2521225:2521225252122525225561332Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-25117
NC_007492:3332839:3347076334707633483741299Pseudomonas fluorescens PfO-1, complete genomeGeneral substrate transporter2e-25117
NC_013730:2751484:2770386277038627716661281Spirosoma linguale DSM 74, complete genomemajor facilitator superfamily MFS_11e-23111
NC_012856:737170:7876577876577889371281Ralstonia pickettii 12D chromosome 1, complete genomemajor facilitator superfamily MFS_11e-22107
NC_014306:2518996:2522258252225825235471290Erwinia billingiae Eb661, complete genomeGeneral substrate transporter4e-21102
NC_012724:1781554:1781554178155417828311278Burkholderia glumae BGR1 chromosome 1, complete genomePutative transport related, membrane protein3e-20100
NC_007650:420745:4295344295344308321299Burkholderia thailandensis E264 chromosome II, complete sequencemajor facilitator family transporter4e-2099.8
NC_015381:1623587:167199416719941672947954Burkholderia gladioli BSR3 chromosome 1, complete sequence4e-1789.7
NC_007907:4926548:4946274494627449475661293Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1584.3
NC_010623:72500:790527905279513462Burkholderia phymatum STM815 chromosome 2, complete sequence7e-1375.5
NC_017047:3907854:3929122392912239304381317Rahnella aquatilis HX2 chromosome, complete genomemajor facilitator superfamily protein5e-1066.2
NC_015061:3840463:3861708386170838630241317Rahnella sp. Y9602 chromosome, complete genomemajor facilitator superfamily MFS_15e-1066.2
NC_007644:469181:4810284810284823531326Moorella thermoacetica ATCC 39073, complete genomeMajor facilitator superfamily MFS_14e-0963.2
NC_016626:1669477:167185916718591672185327Burkholderia sp. YI23 plasmid byi_1p, complete sequencemajor facilitator superfamily protein2e-0860.8
NC_014306:2518996:2538760253876025400731314Erwinia billingiae Eb661, complete genomeD-galactonate transporter3e-0860.5
NC_010676:2720068:2734802273480227361631362Burkholderia phytofirmans PsJN chromosome 2, complete sequencemajor facilitator superfamily MFS_13e-0860.5
NC_011283:2836000:2915219291521929165021284Klebsiella pneumoniae 342 chromosome, complete genomemajor facilitator family transporter6e-0859.3
NC_013850:2846069:2877587287758728788701284Klebsiella variicola At-22 chromosome, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_010498:1094000:1109201110920111104931293Escherichia coli SMS-3-5, complete genomed-galactonate transporter1e-0758.2
NC_018720:417500:4246794246794259231245Bifidobacterium asteroides PRL2011 chromosome, complete genomeMFS transporter, probably Galactonate transporter3e-0757
NC_016810:4027170:4050526405052640518631338Salmonella enterica subsp. enterica serovar Typhimurium strd-galactonate transporter4e-0756.6
NC_016856:4019549:4042905404290540442421338Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SD-galactonate transport protein4e-0756.6
NC_016857:4025767:4050527405052740518641338Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74D-galactonate transport protein4e-0756.6
NC_016863:3967156:3990512399051239918491338Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1D-galactonate transport protein4e-0756.6
NC_011294:3880500:3903869390386939051611293Salmonella enterica subsp. enterica serovar Enteritidis strd-galactonate transporter4e-0756.6
NC_016860:4110968:4134324413432441356161293Salmonella enterica subsp. enterica serovar Typhimurium strD-galactonate transporter4e-0756.6
NC_004337:3590323:3880981388098138823181338Shigella flexneri 2a str. 301, complete genomeD-galactonate transport protein4e-0756.6
NC_010102:3955479:3978105397810539794031299Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0756.2
NC_011205:4038884:4062259406225940635571299Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853d-galactonate transporter4e-0756.2
NC_011892:352652:3604793604793618641386Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completemajor facilitator superfamily MFS_14e-0756.2
NC_011147:3789696:3812955381295538142921338Salmonella enterica subsp. enterica serovar Paratyphi A strMFS family D-galactonate transport protein4e-0756.2
NC_012125:3941974:3964974396497439663111338Salmonella enterica subsp. enterica serovar Paratyphi C strainMFS family, D-galactonate transport protein6e-0755.8
NC_014837:809911:8239668239668252971332Pantoea sp. At-9b chromosome, complete genomemajor facilitator superfamily protein6e-0755.8
NC_015556:1188500:1188550118855011898841335Pseudomonas fulva 12-X chromosome, complete genomemajor facilitator superfamily MFS_17e-0755.8
NC_015761:1488807:1495826149582614971121287Salmonella bongori NCTC 12419, complete genomemembrane transport protein9e-0755.5
NC_002952:2653482:2672796267279626740731278Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative transporter protein2e-0653.9
NC_007622:2501562:2520959252095925222361278Staphylococcus aureus RF122, complete genomeprobable transport protein2e-0653.9