Pre_GI: BLASTP Hits

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Query: NC_010498:1117938:1122396 Escherichia coli SMS-3-5, complete genome

Start: 1122396, End: 1122995, Length: 600

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:1466496:1481557148155714829301374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc137e-111399
NC_011601:1269500:1291265129126512926381374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc137e-111399
NC_011601:1077548:1098701109870111000741374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransposase of ISEc137e-111399
NC_013008:3911356:391880239188023919692891Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase6e-82303
NC_011353:3956630:396407639640763964966891Escherichia coli O157:H7 str. EC4115 chromosome, complete genome6e-82303
AP010958:3627355:363495036349503635759810Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted IS608 transposase8e-82302
NC_013353:3627355:363495036349503635759810Escherichia coli O103:H2 str. 12009, complete genomeIS608 transposase8e-82302
AP010958:5090696:511128151112815112240960Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-82302
NC_013353:5090696:511128151112815112240960Escherichia coli O103:H2 str. 12009, complete genome8e-82302
NC_013364:3701895:370879037087903709749960Escherichia coli O111:H- str. 11128, complete genome8e-82302
NC_002655:3919545:392714239271423927882741Escherichia coli O157:H7 EDL933, complete genomeputative transposase7e-82302
NC_007946:1119000:112082311208231121281459Escherichia coli UTI89, complete genomeputative transposase1e-77288
NC_004431:1211000:121150712115071211965459Escherichia coli CFT073, complete genomePutative Transposase2e-76284
NC_007607:87000:121613121613122101489Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein1e-36152
NC_007607:87000:1212281212281223431116Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative transposase3e-34144
NC_010660:86445:9194091940930551116Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceputative transposase3e-33141
NC_014228:3505320:3523246352324635243671122Xenorhabdus nematophila ATCC 19061, complete genome8e-29126
NC_014228:3505320:352438035243803524628249Xenorhabdus nematophila ATCC 19061, complete genome1e-1892.8
NC_019892:5368096:5369424536942453708091386Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase family protein2e-1479.3
NC_008786:492363:5112585112585123941137Verminephrobacter eiseniae EF01-2, complete genome7e-1373.9
NC_010475:2188827:2205964220596422072921329Synechococcus sp. PCC 7002, complete genometransposase3e-1168.6
NC_018012:4221612:4233362423336242347351374Thiocystis violascens DSM 198 chromosome, complete genometransposase family protein8e-1167
NC_008781:3302934:330379933037993304680882Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein1e-0962.8
NC_008508:2572450:258394725839472584678732Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1,Transposase, ISLbp112e-0962.4
NC_015186:347346:3618883618883632761389Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-0962
NC_015186:2884866:2886469288646928878571389Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element2e-0962
NC_008750:1253354:127017712701771270356180Shewanella sp. W3-18-1, complete genome6e-0960.5
NC_008510:2605500:261720826172082617939732Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,Transposase, ISLbp117e-0960.5
NC_008786:4040864:4045582404558240469011320Verminephrobacter eiseniae EF01-2, complete genometransposase, IS4 family protein1e-0860.1
NC_004663:5437794:5439737543973754408461110Bacteroides thetaiotaomicron VPI-5482, complete genometransposase2e-0858.9
NC_009484:775828:7862017862017875621362Acidiphilium cryptum JF-5 chromosome, complete genometransposase, IS4 family protein3e-0858.5
NC_006513:148950:1534361534361547281293Azoarcus sp. EbN1, complete genometransposase, is4 family2e-0755.5
NC_006513:38818:4097640976422681293Azoarcus sp. EbN1, complete genomeputative transposase, is4 family2e-0755.5
NC_013194:102000:1183211183211196461326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein3e-0755.1
NC_019902:2372097:2375856237585623781712316Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative transposase3e-0755.1
NC_012560:4201969:422616842261684226872705Azotobacter vinelandii DJ, complete genometransposase3e-0755.1
NC_021150:4201965:422616442261644226868705Azotobacter vinelandii CA6, complete genometransposase3e-0755.1
NC_013851:3478153:3486974348697434883051332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein4e-0754.7
NC_013851:608089:6126696126696140001332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein4e-0754.7
NC_013851:3166969:3175505317550531768361332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein4e-0754.7
NC_013194:963735:9811599811599824841326Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetransposase IS4 family protein6e-0753.9
NC_010529:296500:301178301178301948771Cupriavidus taiwanensis plasmid pRALTA, complete sequencetransposase, IS4 family9e-0753.5
NC_002942:675829:6938216938216952271407Legionella pneumophila subsp. pneumophila str. Philadelphia 1,hypothetical protein8e-0753.5
NC_013851:2317091:2323976232397623253071332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein8e-0753.5
NC_013851:608089:6196996196996210301332Allochromatium vinosum DSM 180 chromosome, complete genometransposase IS4 family protein8e-0753.5
NC_015064:1984662:2006270200627020077031434Acidobacterium sp. MP5ACTX9 chromosome, complete genometransposase IS4 family protein1e-0653.1
NC_009485:1648896:1653244165324416544311188Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-0652.4
NC_011982:206784:2081592081592095801422Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase3e-0652