Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1154243 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1154243, End: 1154773, Length: 531

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1690811:170987217098721710468597Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-87320
NC_011094:1923870:1940354194035419416821329Salmonella enterica subsp. enterica serovar Schwarzengrund strside tail fiber protein2e-83308
NC_016856:1326503:1326503132650313289442442Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sside tail fiber protein2e-81301
NC_011205:1391971:1393043139304313954602418Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853side tail fiber protein2e-79294
NC_016810:2719779:2732413273241327347852373Salmonella enterica subsp. enterica serovar Typhimurium strDNA recombinase6e-57219
NC_016857:2719779:2732413273241327347852373Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail fiber-like protein6e-57219
NC_016863:2721826:2734460273446027368322373Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1tail fiber-like protein5e-57219
NC_011080:2722492:2734758273475827371302373Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein5e-57219
NC_003197:2720726:2734726273472627370982373Salmonella typhimurium LT2, complete genometail fiber-like protein5e-57219
NC_016856:2773995:2786255278625527886272373Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stail fiber-like protein5e-57219
NC_016860:2716152:2730134273013427325062373Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein5e-57219
NC_017046:2717810:2731792273179227331171326Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA recombinase-like protein1e-56218
NC_011080:2342672:234570623457062346548843Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein4e-40164
NC_003198:2297837:230113623011362301918783Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-40164
NC_011083:2375061:239150023915002392291792Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-40163
NC_010102:683444:701098701098701889792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-40163
NC_003197:2327474:234392023439202344711792Salmonella typhimurium LT2, complete genomeputative tail fiber protein of phage5e-40163
NC_016832:687000:703004703004703795792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Side tail fiber protein5e-40163
NC_016856:2379027:239547323954732396264792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber protein of phage5e-40163
NC_016857:2325190:234163623416362342427792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74side tail fiber protein5e-40163
NC_016860:2323017:233946323394632340254792Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein5e-40163
NC_016863:2324293:234366523436652344456792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tail fiber protein of phage5e-40163
NC_017046:2324554:234100023410002341791792Salmonella enterica subsp. enterica serovar Typhimurium str. 7985e-40163
NC_016810:2325190:234163623416362342463828Salmonella enterica subsp. enterica serovar Typhimurium str5e-40163
NC_012125:1517925:153561915356191536410792Salmonella enterica subsp. enterica serovar Paratyphi C straintail fiber protein of phage1e-39162
NC_006905:2355290:235820423582042358995792Salmonella enterica subsp. enterica serovar Choleraesuis strputative tail fiber protein of phage1e-39162
NC_006905:1342474:1346171134617113488492679Salmonella enterica subsp. enterica serovar Choleraesuis strside tail fiber protein1e-37155
NC_011294:1006630:1015048101504810167571710Salmonella enterica subsp. enterica serovar Enteritidis strchimeric prophage tail protein1e-37155
NC_011205:1107998:1115675111567511173841710Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853side tail fiber protein5e-37153
NC_005815:61148:2928292858642937Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completephage lambda-related protein2e-34145
NC_003198:4453457:4483135448313544847541620Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage tail fibre protein6e-33139
NC_011205:2462025:246538824653882465852465Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-29129
NC_007613:1353500:1373323137332313754732151Shigella boydii Sb227, complete genomeputative bacteriophage tail protein3e-1374.3
NC_010658:1772994:1774417177441717761291713Shigella boydii CDC 3083-94, complete genomegpH1e-1169.3
NC_011002:564654:5747005747005770572358Burkholderia cenocepacia J2315 chromosome 3, complete sequencehypothetical protein5e-1063.9
NC_010102:1779707:1801118180111818022121095Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0962.4
NC_020908:4093560:4111224411122441122491026Octadecabacter arcticus 238, complete genomehypothetical protein7e-0960.1
NC_009617:1085000:1104627110462711064501824Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein1e-0858.9
NC_012751:1988280:199616019961601997080921Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative phage tail fiber protein3e-0858.2
NC_012751:1988280:198828019882801989200921Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative phage tail fiber protein3e-0858.2
NC_012751:1988280:199222019922201993140921Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative phage tail fiber protein3e-0858.2
NC_014837:3739408:3760769376076937622681500Pantoea sp. At-9b chromosome, complete genomephage-like tail fiber-like protein1e-0755.8
NC_011205:2137696:2149389214938921509511563Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein4e-0754.3
NC_016856:2085283:2096201209620120977631563Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-0754.3
NC_016863:2029340:2044393204439320459551563Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail-like protein4e-0754.3
NC_016857:2027311:2042364204236420439261563Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74tail protein4e-0754.3
NC_017046:2026672:2041725204172520432871563Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber protein4e-0754.3
NC_011294:2009388:2021082202108220226441563Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber protein4e-0754.3
NC_011094:2115750:2128065212806521296091545Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein4e-0754.3
NC_016810:2027311:2042364204236420439591596Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber protein5e-0753.9
NC_010723:915697:9303139303139323942082Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein5e-0753.9
NC_018515:3411276:3421030342103034221091080Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein6e-0753.9
NC_010102:1829357:1842177184217718434001224Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0651.6