Pre_GI: BLASTP Hits

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Query: NC_010067:84093:98180 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 98180, End: 98419, Length: 240

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2912219:292460329246032924845243Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus needle protein6e-36149
NC_006511:2819128:283062128306212830863243Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein2e-35147
NC_011147:2814664:282615728261572826399243Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein2e-35147
NC_003198:2856596:286808928680892868331243Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein2e-35147
NC_004631:2842453:285394628539462854188243Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein2e-35147
NC_016832:2829767:284124528412452841487243Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-35147
NC_010102:2967464:297905729790572979299243Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-35145
NC_011274:2881306:289153928915392891781243Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein2e-34144
NC_011205:3050235:306046630604663060708243Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus needle protein2e-34144
NC_011094:2913500:292328129232812923523243Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus needle protein2e-34144
NC_003197:3005842:301607530160753016317243Salmonella typhimurium LT2, complete genomeneedle complex major subunit2e-34144
NC_006905:2960260:296960229696022969844243Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; cytoplasmic2e-34144
NC_011080:2982346:299257929925792992821243Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus needle protein2e-34144
NC_011083:2980356:299058929905892990831243Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus needle protein2e-34144
NC_011294:2890500:290073429007342900976243Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein2e-34144
NC_012125:2938519:294998629499862950228243Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity 1 island effector protein2e-34144
NC_017046:3027161:303739130373913037633243Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus2e-34144
NC_016863:2974333:298456529845652984807243Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex major subunit2e-34144
NC_016860:3029272:303950530395053039747243Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein2e-34144
NC_016857:3028421:303865130386513038893243Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex major subunit2e-34144
NC_016856:3026426:303631230363123036554243Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex major subunit2e-34144
NC_016831:2867766:287799828779982878240243Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein2e-34144
NC_016810:3028421:303865130386513038893243Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus2e-34144
NC_015761:2726000:273630427363042736546243Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein5e-32135
NC_002695:3702344:372028737202873720526240Escherichia coli O157:H7 str. Sakai, complete genomeEprI6e-26115
NC_011751:3285646:330451233045123304751240Escherichia coli UMN026 chromosome, complete genometype III secretion system needle protein6e-26115
NC_011353:3805819:382468438246843824923240Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus needle protein6e-26115
NC_013008:3761467:377941037794103779649240Escherichia coli O157:H7 str. TW14359 chromosome, complete genometype III secretion apparatus protein EprI6e-26115
NC_009800:2995958:301696830169683017183216Escherichia coli HS, complete genometype III secretion apparatus needle protein3e-21100
NC_010468:906957:921841921841922056216Escherichia coli ATCC 8739, complete genometype III secretion system needle protein3e-21100
NC_013961:851044:860691860691860960270Erwinia amylovora, complete genomeType III secretion system protein PrgI3e-1994
NC_013971:1660144:167353316735331673805273Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein9e-1579
NC_013722:1689125:171186217118621712155294Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein2e-1374.7
NC_012214:2221702:225498622549862255159174Erwinia pyrifoliae Ep1/96, complete genomeCell invasion protein-cytoplasmic/type III secretion system needle protein2e-1270.9
NC_010694:2138000:216761821676182167824207Erwinia tasmaniensis, complete genomeType III secretion apparatus1e-1168.2
CP002516:903241:918097918097918337241Escherichia coli KO11, complete genome3e-0650.4
CU928160:3030324:304902930490293049184156Escherichia coli IAI1 chromosome, complete genomePutative Type III secretion EprI protein5e-0649.7
NC_011748:3196173:321487832148783215033156Escherichia coli 55989, complete genomePutative Type III secretion EprI protein5e-0649.7
CP002185:3167738:318782431878243187979156Escherichia coli W, complete genome5e-0649.7
CU928145:3196173:321487832148783215033156Escherichia coli 55989 chromosome, complete genomePutative Type III secretion EprI protein5e-0649.7
NC_011741:3030324:304902930490293049184156Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion EprI protein5e-0649.7
NC_013353:3474077:349278134927813492936156Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EprI5e-0649.7
NC_013361:3867558:388626338862633886418156Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EprI5e-0649.7
NC_013364:3552284:357099535709953571150156Escherichia coli O111:H- str. 11128, complete genome5e-0649.7
AP010958:3474077:349278134927813492936156Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EprI5e-0649.7