Pre_GI: BLASTP Hits

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Query: NC_010067:3056774:3080218 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3080218, End: 3081720, Length: 1503

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:3512950:3514145351414535156471503Citrobacter rodentium ICC168, complete genomehypothetical protein0909
NC_011415:4767892:4767892476789247693941503Escherichia coli SE11 chromosome, complete genomehypothetical protein0892
NC_012967:4449576:4471788447178844732901503Escherichia coli B str. REL606 chromosome, complete genomeputative ATPase0889
AC_000091:4472000:4493241449324144947431503Escherichia coli W3110 DNA, complete genomepredicted ATPase0889
NC_010498:4821519:4843468484346848449701503Escherichia coli SMS-3-5, complete genomehypothetical protein0888
CP002797:4603787:4605030460503046065321503Escherichia coli NA114, complete genomeHypothetical protein0886
NC_011742:4795733:4817932481793248194341503Escherichia coli S88 chromosome, complete genomeATPase0886
NC_013941:5192500:5192653519265351941551503Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein0885
NC_008563:4905186:4905186490518649067151530Escherichia coli APEC O1, complete genomepredicted ATPase0885
NC_004337:4374500:4397528439752843990781551Shigella flexneri 2a str. 301, complete genomehypothetical protein0885
NC_017328:4417000:4441239444123944427891551Shigella flexneri 2002017 chromosome, complete genomehypothetical protein0885
NC_011741:4570498:4572799457279945743011503Escherichia coli IAI1 chromosome, complete genomeputative ATPase0884
CU928160:4570498:4572799457279945743011503Escherichia coli IAI1 chromosome, complete genomeputative ATPase0884
NC_008258:4345400:4366158436615843676601503Shigella flexneri 5 str. 8401, complete genomehypothetical protein0884
NC_007613:4217557:4230256423025642317581503Shigella boydii Sb227, complete genomehypothetical protein0883
NC_020063:4127161:4144584414458441460861503Enterobacteriaceae bacterium strain FGI 57, complete genomeputative ATPase0863
NC_013956:595320:5973855973855988871503Pantoea ananatis LMG 20103 chromosome, complete genomeYjgR0811
NC_016816:3974895:3995402399540239969041503Pantoea ananatis LMG 5342, complete genomeATPase0810
NC_010694:436500:4390204390204405191500Erwinia tasmaniensis, complete genomeConserved hypothetical protein YjgR0806
NC_013961:441719:4429984429984444971500Erwinia amylovora, complete genomeUncharacterized protein yjgR0795
NC_013971:3296272:3326792332679233282911500Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein0795
NC_008752:3511006:3532402353240235339251524Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF853, NPT hydrolase putative3e-156552
NC_010524:2117347:2117347211734721189241578Leptothrix cholodnii SP-6, complete genomeprotein of unknown function DUF853 NPT hydrolase putative1e-155549
NC_015731:3180194:3181601318160131831211521Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein5e-148524
NC_013165:2440883:2459707245970724613411635Slackia heliotrinireducens DSM 20476, complete genomepredicted ATPase6e-145514
NC_019903:134169:1381801381801396881509Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,ATPase2e-144512
NC_012004:470492:4894734894734909721500Streptococcus uberis 0140J, complete genomehypothetical protein3e-138492
NC_003911:2042389:2061709206170920632621554Silicibacter pomeroyi DSS-3, complete genomehypothetical protein4e-138491
NC_009727:1001203:1001203100120310025941392Coxiella burnetii Dugway 7E9-12, complete genomehypothetical protein6e-137488
NC_002971:951102:9706179706179720081392Coxiella burnetii RSA 493, complete genomehypothetical protein6e-136484
NC_011527:953442:9558659558659572561392Coxiella burnetii CbuG_Q212, complete genomeATPase2e-135483
NC_007759:2146254:2163581216358121650711491Syntrophus aciditrophicus SB, complete genomeATPase2e-127456
NC_011528:767940:7679407679407690281089Coxiella burnetii CbuK_Q154, complete genomeATPase2e-108392
NC_017186:7822448:7825448782544878269741527Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-102373
NC_014318:7821227:7825402782540278269281527Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein2e-102373
NC_019673:1275627:1301285130128513027991515Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-101370
NC_013235:1938889:1958413195841319600801668Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF853 NPT hydrolase putative3e-99362
NC_017955:693303:7178237178237194331611Modestobacter marinus, complete genomeATPase2e-98360
NC_011985:2902000:2912648291264829142491602Agrobacterium radiobacter K84 chromosome 1, complete genomeATP-binding protein5e-96352
NC_009077:3851203:3852116385211638536871572Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF853, NPT hydrolase putative2e-93343
NC_014168:709036:7116137116137131931581Segniliparus rotundus DSM 44985 chromosome, complete genomehypothetical protein5e-93342