Pre_GI: BLASTP Hits

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Query: NC_009698:2171151:2191239 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2191239, End: 2192069, Length: 831

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009697:2173000:219102021910202191850831Clostridium botulinum A str. ATCC 19397 chromosome, completeMerR family transcriptional regulator8e-150529
NC_009495:2244774:226237822623782263208831Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMerR family transcriptional regulator8e-150529
NC_004557:1553000:156846115684611569303843Clostridium tetani E88, complete genometranscriptional regulatory protein6e-133473
NC_010723:1465097:146844114684411469277837Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulatory protein1e-109395
NC_010674:1496500:149822114982211499057837Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulatory protein7e-109393
NC_010001:1745089:175040017504001751233834Clostridium phytofermentans ISDg, complete genometranscriptional regulator, MerR family8e-79293
NC_016584:4325964:432874343287434329555813Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-1065.9
NC_013406:3672857:371383337138333714651819Paenibacillus sp. Y412MC10 chromosome, complete genomeMerR family transcriptional regulator3e-0962.4
UCMB5137:3660165:367585036758503676662813Bacillus atrophaeus UCMB-5137putative transcriptional regulator of efflux transporter3e-0962.4
NC_017179:3984000:398807339880733988930858Clostridium difficile BI1, complete genomeMerR family transcriptional regulator2e-0859.7
NC_013315:3978495:398005339800533980910858Clostridium difficile CD196 chromosome, complete genomeMerR family transcriptional regulator2e-0859.7
NC_009089:4177117:418251841825184183375858Clostridium difficile 630, complete genomeMerR-family transcriptional regulator2e-0859.7
NC_000964:2702376:271526127152612716082822Bacillus subtilis subsp. subtilis str. 168, complete genometranscriptional regulator3e-0859.3
NC_016584:2244966:227049422704942271303810Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-0858.9
UCMB5137:1396603:141244914124491413276828Bacillus atrophaeus UCMB-5137transcriptional regulator5e-0858.2
NC_017195:2498113:252272125227212523542822Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemultidrug-efflux transporter 2 regulator9e-0857.8
NC_014479:2505823:252323425232342524088855Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional regulator9e-0857.8
NC_014976:684000:699900699900700721822Bacillus subtilis BSn5 chromosome, complete genometranscriptional regulator8e-0857.8
NC_019896:1483073:150976115097611510582822Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeMultidrug-efflux transporter 2 regulator8e-0857.8
NC_020418:14965:164191641917276858Morganella morganii subsp. morganii KT, complete genomeTranscriptional regulator, MerR family8e-0857.8
NC_020244:2509000:253068625306862531507822Bacillus subtilis XF-1, complete genometranscriptional regulator8e-0857.8
NC_014639:1358597:138278313827831383610828Bacillus atrophaeus 1942 chromosome, complete genometranscriptional regulator2e-0756.6
CP002207:1358597:138278313827831383610828Bacillus atrophaeus 1942, complete genometranscriptional regulator2e-0756.6
NC_014633:655693:656410656410657219810Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencetranscriptional regulator, MerR family4e-0755.5
NC_014624:2569604:258018525801852580961777Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-0755.1
NC_010723:1379256:138162413816241382097474Clostridium botulinum E3 str. Alaska E43, complete genomeMerR-family transcriptional regulator5e-0755.1
NC_004193:375416:406314406314407078765Oceanobacillus iheyensis HTE831, complete genometranscriptional activator of multidrug-efflux transporters7e-0754.7
NC_016047:2658000:268162426816242682445822Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemultidrug-efflux transporter 2 regulator1e-0653.9
UCMB5137:2054735:207424220742422075075834Bacillus atrophaeus UCMB-5137BmrR protein1e-0653.9
NC_016627:3158353:317921431792143180050837Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator2e-0653.5
NC_010602:2244729:227620322762032276586384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator2e-0653.1
NC_010602:2244729:231391023139102314293384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator2e-0653.1
NC_010842:2310756:231929623192962319679384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator2e-0653.1
NC_010842:2250119:228158922815892281972384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator2e-0653.1
NC_009699:1122000:114293611429361143757822Clostridium botulinum F str. Langeland chromosome, complete genomeMerR family transcriptional regulator2e-0653.1
NC_016609:1774259:178381717838171784584768Niastella koreensis GR20-10 chromosome, complete genomeantibiotic resistance transcriptional regulator, MerR family3e-0652.8
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator3e-0652.8
NC_013316:4095905:412571441257144126526813Clostridium difficile R20291, complete genomeMerR-family transcriptional regulator3e-0652.8
NC_013315:4015119:404492840449284045740813Clostridium difficile CD196 chromosome, complete genomeMerR family transcriptional regulator3e-0652.8
NC_017179:4023139:405294840529484053760813Clostridium difficile BI1, complete genomeMerR family transcriptional regulator3e-0652.8
NC_016627:2593242:259685025968502597614765Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator3e-0652.4
NC_017195:2498113:254309625430962543944849Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeBmrR4e-0652
NC_016047:2658000:268882426888242689669846Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeBmrR protein5e-0652
NC_013282:3962188:398362139836213984046426Cronobacter turicensis, complete genomeHTH-type transcriptional regulator zntR5e-0652
NC_007907:1940000:194411719441171944872756Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0651.6
NC_011830:3025437:303125230312523032007756Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, MerR family6e-0651.6
NC_006270:2657726:267236126723612673206846Bacillus licheniformis ATCC 14580, complete genometranscriptional regulator6e-0651.6
NC_006322:2658587:267322126732212674066846Bacillus licheniformis ATCC 14580, complete genomeBmrR6e-0651.6
NC_016633:14000:202342023420998765Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative transcriptional regulator1e-0550.8
CP002185:3627992:365167436516743652099426Escherichia coli W, complete genomeDNA-binding transcriptional activator in response to Zn(II)1e-0550.8