Pre_GI: BLASTP Hits

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Query: NC_009664:3969609:3984185 Kineococcus radiotolerans SRS30216, complete genome

Start: 3984185, End: 3984976, Length: 792

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013521:1976331:198781419878141988599786Sanguibacter keddieii DSM 10542, complete genomeprepilin signal peptidase PulO-like peptidase8e-35147
NC_014761:516981:5310145310145321021089Oceanithermus profundus DSM 14977 chromosome, complete genomeprepilin peptidase7e-25114
NC_011979:3341099:336903233690323369823792Geobacter sp. FRC-32, complete genomepeptidase A24A domain protein9e-23107
NC_007498:2475781:249129324912932492072780Pelobacter carbinolicus DSM 2380, complete genomeprepilin peptidase9e-21100
NC_009665:4675289:469174446917444692670927Shewanella baltica OS185 chromosome, complete genomeprepilin peptidase1e-20100
NC_011663:4579777:459648845964884597414927Shewanella baltica OS223 chromosome, complete genomeprepilin peptidase2e-2099.8
NC_008095:7139056:7155008715500871560151008Myxococcus xanthus DK 1622, complete genomeprepilin peptidase3e-2099.4
NC_008321:458811:462703462703463629927Shewanella sp. MR-4, complete genomePrepilin peptidase2e-1996.3
NC_015672:2071141:207361120736112074393783Flexistipes sinusarabici DSM 4947 chromosome, complete genomePrepilin peptidase2e-1996.3
NC_015711:8909256:8925243892524389262501008Myxococcus fulvus HW-1 chromosome, complete genomeprepilin peptidase6e-1994.7
NC_014614:260782:260782260782261540759Clostridium sticklandii, complete genomeputative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD7e-1994.4
NC_013894:1194458:119933211993321200078747Thermocrinis albus DSM 14484 chromosome, complete genomepeptidase A24A domain protein1e-1893.6
NC_010814:2275199:230999123099912310767777Geobacter lovleyi SZ, complete genomepeptidase A24A domain protein1e-1893.6
NC_014632:1914500:194788319478831948620738Ilyobacter polytropus DSM 2926 chromosome, complete genomepeptidase A24A domain-containing protein1e-1790.5
NC_013939:106681:122048122048122824777Deferribacter desulfuricans SSM1, complete genometype IV prepilin peptidase1e-1790.5
NC_012440:1841315:184782718478271848606780Persephonella marina EX-H1, complete genomeleader peptidase PppA2e-1789.7
NC_009434:1156834:116750211675021168371870Pseudomonas stutzeri A1501, complete genometype 4 prepilin peptidase PilD2e-1789.4
NC_008782:841134:845516845516846397882Acidovorax sp. JS42, complete genomePrepilin peptidase4e-1788.6
NC_011992:773905:793657793657794538882Acidovorax ebreus TPSY, complete genomePrepilin peptidase5e-1788.2
NC_015740:1017000:102701110270111027880870Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 prepilin peptidase PilD5e-1788.2
NC_014758:310394:314886314886315665780Calditerrivibrio nitroreducens DSM 19672 chromosome, completeprepilin peptidase8e-1787.4
NC_011901:837085:844532844532845398867Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype IV pilus prepilin peptidase PilD2e-1685.9
NC_014910:966761:971083971083971961879Alicycliphilus denitrificans BC chromosome, complete genomeprepilin peptidase4e-1685.5
NC_015422:910292:912461912461913339879Alicycliphilus denitrificans K601 chromosome, complete genomePrepilin peptidase4e-1685.5
NC_018868:3943088:394893539489353949663729Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype IV pilus prepilin peptidase PilD1e-1584
NC_014618:1040381:106162210616221062443822Enterobacter cloacae SCF1 chromosome, complete genomeprepilin peptidase1e-1584
NC_010501:4989455:500955750095575010423867Pseudomonas putida W619, complete genomePrepilin peptidase2e-1583.2
NC_010322:768849:771291771291772157867Pseudomonas putida GB-1 chromosome, complete genomeprepilin peptidase2e-1583.2
NC_017167:407352:423756423756424619864Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1peptidase A24A domain-containing protein3e-1582.4
NC_013216:2806094:280989928098992810645747Desulfotomaculum acetoxidans DSM 771, complete genomepeptidase A24A domain protein4e-1582
NC_008740:2989856:300525330052533006128876Marinobacter aquaeolei VT8, complete genomePrepilin peptidase5e-1581.6
NC_020829:1068438:107134610713461072218873Pseudomonas denitrificans ATCC 13867, complete genometype 4 prepilin peptidase PilD5e-1581.6
NC_008262:2498000:249804624980462498789744Clostridium perfringens SM101, complete genomesignal peptidase type IV5e-1581.6
NC_015733:715947:716570716570717421852Pseudomonas putida S16 chromosome, complete genomeprepilin peptidase7e-1581.3
NC_009437:1189432:119451511945151195291777Caldicellulosiruptor saccharolyticus DSM 8903, complete genomepeptidase A24A domain-containing protein1e-1480.1
NC_015410:969526:974731974731975582852Pseudomonas mendocina NK-01 chromosome, complete genomeprepilin peptidase2e-1479.7
NC_014720:980000:982251982251983027777Caldicellulosiruptor kronotskyensis 2002 chromosome, completeprepilin peptidase2e-1479.3
NC_008253:3161311:320832832083283209137810Escherichia coli 536, complete genomeputative prepilin peptidase5e-1478.6
NC_015761:299386:338928338928339749822Salmonella bongori NCTC 12419, complete genomeprepilin peptidase5e-1478.6
NC_012967:3012317:304047730404773041286810Escherichia coli B str. REL606 chromosome, complete genomebifunctional prepilin leader peptidase/ methylase4e-1478.6
NC_015556:4074367:409481540948154095687873Pseudomonas fulva 12-X chromosome, complete genomePrepilin peptidase4e-1478.6
NC_019978:1816940:181886618188661819600735Halobacteroides halobius DSM 5150, complete genomeprepilin signal peptidase PulO-like peptidase6e-1478.2
NC_017986:3407913:341082434108243411690867Pseudomonas putida ND6 chromosome, complete genomeprepilin peptidase6e-1478.2
NC_016818:362548:373450373450374283834Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprepilin signal peptidase PulO-like peptidase5e-1478.2
NC_011751:3530954:356333335633333564142810Escherichia coli UMN026 chromosome, complete genomebifunctional prepilin leader peptidase and methylase5e-1478.2
NC_011742:3277941:330489633048963305705810Escherichia coli S88 chromosome, complete genomebifunctional prepilin leader peptidase and methylase5e-1478.2
NC_002947:737924:738547738547739413867Pseudomonas putida KT2440, complete genometype IV pili prepilin peptidase PilD/XcpA7e-1477.8
NC_009512:755658:757888757888758754867Pseudomonas putida F1, complete genomePrepilin peptidase7e-1477.8
NC_009074:3409849:343653634365363437450915Burkholderia pseudomallei 668 chromosome I, complete sequencetype IV prepilin leader peptidase1e-1377.4
NC_007205:60069:785617856179325765Candidatus Pelagibacter ubique HTCC1062, complete genomeType II Secretion PilD1e-1377
NC_011750:3584000:361122736112273612036810Escherichia coli IAI39 chromosome, complete genomebifunctional prepilin leader peptidase and methylase1e-1377
NC_010084:3051355:307312030731203074031912Burkholderia multivorans ATCC 17616 chromosome 1, completeprepilin peptidase4e-1375.1
NC_010804:450130:450742450742451653912Burkholderia multivorans ATCC 17616 chromosome 1, completeleader peptidase4e-1375.1
NC_009439:860571:868675868675869544870Pseudomonas mendocina ymp, complete genomeprepilin peptidase1e-1273.9
NC_010995:3197686:321343832134383214364927Cellvibrio japonicus Ueda107, complete genometype IV pilus prepilin peptidase PilD2e-1273.2
NC_010644:254725:255180255180255962783Elusimicrobium minutum Pei191, complete genomepeptidase A24A domain-containing protein2e-1273.2
NC_017047:4379989:439545043954504396280831Rahnella aquatilis HX2 chromosome, complete genomeprepilin peptidase2e-1272.8
NC_008027:4953432:496994349699434970809867Pseudomonas entomophila L48, complete genometype IV pili prepilin peptidase PilD/XcpA3e-1272.8
NC_015391:2523451:255583525558352556569735Carnobacterium sp. 17-4 chromosome, complete genomemembrane protease and transmethylase3e-1272.4
NC_009656:5297000:531243553124355313307873Pseudomonas aeruginosa PA7 chromosome, complete genometype 4 prepilin peptidase PilD3e-1272.4
NC_010001:3421710:344106934410693441824756Clostridium phytofermentans ISDg, complete genomepeptidase A24A domain protein3e-1272.4
NC_015061:4286000:430156443015644302394831Rahnella sp. Y9602 chromosome, complete genomePrepilin peptidase3e-1272.4
NC_014831:786011:801416801416802339924Thermaerobacter marianensis DSM 12885 chromosome, complete genomePrepilin peptidase3e-1272.4
NC_018080:5070687:508369850836985084570873Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 prepilin peptidase PilD6e-1271.2
NC_015380:196554:201558201558201896339Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeleader peptidase (Prepilin peptidase) / N-methyltransferase6e-1168.2
NC_007645:5397526:542290554229055423783879Hahella chejuensis KCTC 2396, complete genomeType II secretory pathway, prepilin signal peptidase PulO and related peptidase7e-1167.8
NC_007912:1111093:111688911168891117785897Saccharophagus degradans 2-40, complete genomePhosphoribosylformylglycinamidine cyclo-ligase3e-1065.9
NC_011071:3544450:356089835608983561761864Stenotrophomonas maltophilia R551-3, complete genomePrepilin peptidase5e-1065.1
NC_015947:3539472:354729535472953548158864Burkholderia sp. JV3 chromosome, complete genomePrepilin peptidase5e-1065.1
NC_009009:2286000:230339423033942304134741Streptococcus sanguinis SK36, complete genomeType IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD, putative1e-0963.5
NC_014924:725380:729963729963730826864Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomePrepilin peptidase2e-0963.2
NC_013716:4728500:474424447442444745017774Citrobacter rodentium ICC168, complete genomeputative T2SS leader peptidase GspO7e-0961.2
NC_020064:3998715:405119540511954052043849Serratia marcescens FGI94, complete genometype 4 prepilin peptidase 17e-0961.2
NC_012668:2744393:276231727623172763078762Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTCP pilin signal peptidase TcpA processing1e-0860.1
NC_009457:351512:391466391466392227762Vibrio cholerae O395 chromosome 2, complete sequenceleader peptidase TcpJ1e-0860.1
NC_004193:375416:645987645987646742756Oceanobacillus iheyensis HTE831, complete genomeleader peptide processing enzyme2e-0859.3
NC_010688:1192410:124466712446671245530864Xanthomonas campestris pv. campestris, complete genomeType II secretory pathway prepilin signal peptidase4e-0858.5
NC_017271:3641705:365343236534323654295864Xanthomonas campestris pv. raphani 756C chromosome, completetype IV prepilin peptidase6e-0858.2
NC_007086:1224867:127159412715941272457864Xanthomonas campestris pv. campestris str. 8004, complete genometype IV pre-pilin leader peptidase6e-0858.2
NC_003902:3666544:367592136759213676784864Xanthomonas campestris pv. campestris str. ATCC 33913, completetype IV pre-pilin leader peptidase6e-0858.2
NC_007508:3835000:384252338425233843386864Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype II secretory pathway prepilin signal peptidase7e-0857.8
NC_010717:1469911:148743014874301488293864Xanthomonas oryzae pv. oryzae PXO99A, complete genometype IV prepilin peptidase9e-0857.4
NC_007705:1583373:160373316037331604596864Xanthomonas oryzae pv. oryzae MAFF 311018, complete genometype IV pre-pilin leader peptidase9e-0857.4
NC_006834:1602994:162156216215621622425864Xanthomonas oryzae pv. oryzae KACC10331, complete genometype IV pre-pilin leader peptidase9e-0857.4
NC_003919:3812778:382167038216703822533864Xanthomonas axonopodis pv. citri str. 306, complete genometype IV pre-pilin leader peptidase1e-0757
NC_017267:3612682:362035636203563621219864Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype IV prepilin peptidase1e-0757