Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:4728500 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4728624472899837530S ribosomal subunit protein S12QuickGO ontologyBLASTP
4729095472956547130S ribosomal subunit protein S7QuickGO ontologyBLASTP
472966247317762115elongation factor GQuickGO ontologyBLASTP
473184747330311185Elongation factor tu EF-TuQuickGO ontologyBLASTP
473329247357152424putative polysaccharide degrading enzymeQuickGO ontologyBLASTP
473611347383382226putative polysaccharide degrading enzymeQuickGO ontologyBLASTP
473873447406201887putative polysaccharide degrading enzymeQuickGO ontologyBLASTP
474112447433282205putative polysaccharide degrading enzymeQuickGO ontologyBLASTP
47434684743662195bacterioferritin-associated ferredoxinQuickGO ontologyBLASTP
47437344744210477bacterioferritinQuickGO ontologyBLASTP
47442444745017774putative T2SS leader peptidase GspOQuickGO ontologyBLASTP
47450044745492489putative T2SS protein MQuickGO ontologyBLASTP
474548547466091125putative T2SS protein LQuickGO ontologyBLASTP