Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:3012317 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
301231730133361020hypothetical proteinBLASTP
301342030145561137Capsule polysaccharide export inner-membrane protein kpsEQuickGO ontologyBLASTP
301458030162561677KpsD proteinQuickGO ontologyBLASTP
301626630170067413-deoxy-manno-octulosonate cytidylyltransferaseQuickGO ontologyBLASTP
301700330190302028Capsule polysaccharide export protein KpsCQuickGO ontologyBLASTP
301906530202971233KpsS proteinQuickGO ontologyBLASTP
30205513021483933hypothetical protein
302154530226841140hypothetical proteinBLASTP
30232583023722465bifunctional Ribulose 5-phosphate reductaseCDP-ribitol pyrophosphorylaseQuickGO ontologyBLASTP
30239603024463504IS1 protein InsBQuickGO ontologyBLASTP
30243823024657276IS1 protein InsAQuickGO ontologyBLASTP
30246863025408723PyrophosphorylaseQuickGO ontologyBLASTP
302542630268021377hypothetical proteinBLASTP
30270113027670660Polysialic acid transport ATP-binding KpsTQuickGO ontologyBLASTP
30276853028461777Polysialic acid transport protein kpsMQuickGO ontologyBLASTP
30295223030058537putative general secretion pathway protein YghDQuickGO ontologyBLASTP
30312353032170936type II secretion protein GspKQuickGO ontologyBLASTP
30322093032772564type II secretion protein GspJQuickGO ontologyBLASTP
30328113033182372type II secretion proteinQuickGO ontologyBLASTP
30331793033742564type II secretion protein GspHQuickGO ontologyBLASTP
30337463034201456type II secretion protein GspGQuickGO ontologyBLASTP
303421830354411224type II secretion protein GspFQuickGO ontologyBLASTP
303544130369341494type II secretion protein GspEQuickGO ontologyBLASTP
303693430389942061type II secretion protein GspDQuickGO ontologyBLASTP
30390243039854831putative type II secretion protein GspCQuickGO ontologyBLASTP
30400013040411411hypothetical proteinBLASTP
30404773041286810bifunctional prepilin leader peptidase methylaseQuickGO ontologyBLASTP