Pre_GI: BLASTP Hits

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Query: NC_009656:4527457:4572105 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 4572105, End: 4573388, Length: 1284

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:4566976:4589452458945245907321281Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative integrase0810
NC_009656:4527457:4657608465760846589571350Pseudomonas aeruginosa PA7 chromosome, complete genomephage integrase family site specific recombinase4e-147521
NC_021150:3698696:3720275372027537215221248Azotobacter vinelandii CA6, complete genomephage integrase3e-138491
NC_012560:3698697:3720276372027637215231248Azotobacter vinelandii DJ, complete genomephage integrase3e-138491
NC_004129:5481629:5491834549183454931711338Pseudomonas fluorescens Pf-5, complete genomesite-specific recombinase, phage integrase family5e-125447
NC_004578:895019:8995348995349009911458Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-110398
NC_007005:1605000:1607964160796416093701407Pseudomonas syringae pv. syringae B728a, complete genomePhage integrase8e-104377
NC_005773:4282840:4312613431261343141211509Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein6e-87321
NC_005773:866157:8716228716228728391218Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein9e-84310
NC_007005:830467:8359468359468371091164Pseudomonas syringae pv. syringae B728a, complete genome2e-65250
NC_014532:3596097:3632063363206336330971035Halomonas elongata DSM 2581, complete genomesite-specific recombinase, phage integrase family6e-58225
NC_011149:4677412:467964346796434680569927Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase8e-57221
NC_004631:4494000:4511590451159045126031014Salmonella enterica subsp. enterica serovar Typhi Ty2, completeprobable phage integrase2e-55216
NC_003198:4513900:4528781452878145297941014Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable phage integrase2e-55216
NC_016832:4482437:4499858449985845008711014Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage integrase2e-55216
NC_010067:3056774:307494730749473075873927Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-54214
NC_004547:667988:6873806873806884021023Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative phage integrase7e-51201
NC_014228:3391500:3392691339269133936981008Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase2e-49197
NC_013892:1503162:1513287151328715142941008Xenorhabdus bovienii SS-2004 chromosome, complete genometyrosine recombinase-like2e-49196
NC_012214:537000:557388557388558347960Erwinia pyrifoliae Ep1/96, complete genomeintegrase6e-49195
NC_013421:701005:744192744192745166975Pectobacterium wasabiae WPP163, complete genomeintegrase family protein4e-49195
NC_009832:4482500:4486861448686144878921032Serratia proteamaculans 568, complete genomeintegrase family protein3e-47189
NC_014228:3505320:3510397351039735114131017Xenorhabdus nematophila ATCC 19061, complete genomeputative phage integrase3e-46186
NC_014029:331919:4017584017584027711014Yersinia pestis Z176003 chromosome, complete genomeintegrase1e-42174
NC_016845:4498097:450306445030644503864801Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Phage integrase1e-42174
NC_009832:4564752:4572097457209745731101014Serratia proteamaculans 568, complete genomeintegrase family protein2e-41170
NC_009832:426993:4500724500724510851014Serratia proteamaculans 568, complete genomeintegrase family protein3e-41169
NC_012913:1041969:106300810630081063919912Aggregatibacter aphrophilus NJ8700, complete genomeintegrase6e-38158
NC_010554:2789722:2793999279399927950691071Proteus mirabilis HI4320, complete genomephage integrase1e-37157
NC_018691:2214464:221498022149802215912933Alcanivorax dieselolei B5 chromosome, complete genomeTyrosine recombinase xerC-like protein7e-33142
NC_011745:3405520:342713034271303427705576Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-30133
NC_010939:1986263:200437920043792004945567Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative integrase6e-26119
NC_009792:3245368:326544332654433265901459Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-23108
NC_007005:830467:837051837051837347297Pseudomonas syringae pv. syringae B728a, complete genome4e-1996.3
NC_009792:3245368:326593832659383266234297Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1686.3
NC_003143:1059580:106425410642541064562309Yersinia pestis CO92, complete genomeintegrase (partial)1e-1481.3
NC_006155:3805640:381032338103233810631309Yersinia pseudotuberculosis IP 32953, complete genome1e-1481.3
NC_015177:2642368:264457726445772645458882Pedobacter saltans DSM 12145 chromosome, complete genomeintegrase family protein2e-1480.9
NC_008149:3556999:356015835601583560406249Yersinia pestis Nepal516, complete genomeintegrase1e-1274.7
NC_014228:3391500:340640634064063406693288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-1169.7
NC_012962:3864000:3866446386644638676481203Photorhabdus asymbiotica, complete genomeProbable phage integrase4e-1169.7
NC_014376:3593500:3603669360366936046881020Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein2e-1067
NC_019960:260997:272856272856273749894Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD2e-1067
NC_012962:3864000:386616338661633866405243Photorhabdus asymbiotica, complete genomeputative integrase-like protein9e-1065.1
NC_012660:4734363:474106147410614741222162Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0964.7
NC_013791:875224:8922118922118932571047Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein2e-0964.3
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase3e-0963.5
NC_010939:2085000:208550420855042086424921Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTyrosine recombinase xerC3e-0963.5
NC_021184:4456904:446240944624094463341933Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD4e-0963.2
NC_014377:961259:973403973403974335933Thermosediminibacter oceani DSM 16646 chromosome, complete genomeintegrase family protein3e-0963.2
NC_009053:2025782:2028258202825820292681011Actinobacillus pleuropneumoniae L20, complete genomeTyrosine recombinase xerC5e-0962.8
NC_009464:180335:196349196349197185837Uncultured methanogenic archaeon RC-I, complete genomeintegrase5e-0962.8
NC_010278:1989500:1989861198986119908711011Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,site-specific tyrosine recombinase XerC5e-0962.8
NC_007712:4023516:402260840226084023519912Sodalis glossinidius str. 'morsitans', complete genomephage integrase7e-0962.4
NC_006510:2910000:2939310293931029403231014Geobacillus kaustophilus HTA426, complete genomeintegrase/recombinase7e-0962.4
NC_012881:1802000:183366218336621834585924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein9e-0962
NC_014228:2883500:2894638289463828956661029Xenorhabdus nematophila ATCC 19061, complete genomeTyrosine recombinase xerC 29e-0962
NC_017167:351069:3541843541843551881005Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein1e-0861.2
NC_018721:2759700:276193527619352762825891Psychroflexus torquis ATCC 700755 chromosome, complete genometyrosine recombinase XerC5e-0859.3
NC_013959:156991:158331158331159230900Sideroxydans lithotrophicus ES-1 chromosome, complete genometyrosine recombinase XerC5e-0859.3
NC_012881:3520956:352492435249243525847924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein7e-0858.9
NC_009257:226417:254534254534255412879Francisella tularensis subsp. tularensis WY96-3418 chromosome,tyrosine recombinase XerD9e-0858.5
NC_010677:214712:242702242702243580879Francisella tularensis subsp. mediasiatica FSC147, complete genometyrosine recombinase XerD9e-0858.5
NC_016937:141984:170101170101170979879Francisella tularensis subsp. tularensis TI0902 chromosome,tyrosine recombinase XerD9e-0858.5
NC_016933:141984:170101170101170979879Francisella tularensis TIGB03 chromosome, complete genometyrosine recombinase XerD9e-0858.5
NC_006570:141966:170083170083170961879Francisella tularensis subsp. tularensis Schu 4, complete genomeIntegrase/recombinase9e-0858.5
NC_008245:141982:170099170099170977879Francisella tularensis subsp. tularensis FSC 198, complete genomeIntegrase/recombinase9e-0858.5
NC_012622:1646000:166542116654211666296876Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeintegrase family protein1e-0757.8
NC_012472:4867210:489589848958984896866969Bacillus cereus 03BB102, complete genomesite-specific recombinase, phage integrase family2e-0757.4
NC_010510:388885:401104401104402021918Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein2e-0757.4
NC_009253:2315958:232009723200972321002906Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0757.4
NC_009253:389835:392779392779393693915Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein3e-0757
NC_017275:1635959:165762716576271658502876Sulfolobus islandicus HVE10/4 chromosome, complete genomeXerC/D integrase-recombinase protein2e-0757
NC_017276:1491473:151314215131421514017876Sulfolobus islandicus REY15A chromosome, complete genomeXerC/D integrase-recombinase protein2e-0757
NC_012588:1585808:160741616074161608291876Sulfolobus islandicus M.14.25 chromosome, complete genomeintegrase family protein2e-0757
NC_012726:1611936:163354616335461634421876Sulfolobus islandicus M.16.4 chromosome, complete genomeintegrase family protein2e-0757
NC_012623:960327:960327960327961202876Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeintegrase family protein2e-0757
NC_013769:1705500:172657917265791727454876Sulfolobus islandicus L.D.8.5 chromosome, complete genomephage integrase family protein2e-0757
NC_015638:2045500:205110020511002051990891Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTyrosine recombinase xerC3e-0756.6
NC_015164:2859000:286196028619602862910951Bacteroides salanitronis DSM 18170 chromosome, complete genomeTyrosine recombinase xerC3e-0756.6
NC_018748:3187233:3201842320184232030801239Emticicia oligotrophica DSM 17448 chromosome, complete genomeintegrase family protein4e-0756.2
NC_016510:2426150:246974824697482470641894Flavobacterium columnare ATCC 49512 chromosome, complete genomeintegrase/recombinase XerC5e-0755.8
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD6e-0755.8
NC_016001:905164:911276911276912172897Flavobacterium branchiophilum, complete genomeTyrosine recombinase XerC7e-0755.5
NC_020291:4357425:436516743651674366105939Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC1e-0655.1
NC_008713:259791:2789042789042800641161Arthrobacter aurescens TC1 plasmid TC2, complete sequencephage integrase family domain protein1e-0655.1
NC_012793:3096095:312761731276173128495879Geobacillus sp. WCH70, complete genomeintegrase family protein1e-0655.1
NC_015589:3813415:382872038287203829688969Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeintegrase family protein1e-0654.7
NC_010674:2856997:2856997285699728580041008Clostridium botulinum B str. Eklund 17B, complete genomephage integrase1e-0654.7
NC_012660:3320330:332033033203303321244915Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase/recombinase1e-0654.7
NC_010336:1117325:114564911456491146527879Francisella philomiragia subsp. philomiragia ATCC 25017, completesite-specific recombinase1e-0654.7
NC_003296:87313:9879598795998381044Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completetyrosine recombinase2e-0654.3
NC_018867:1303287:1306683130668313076961014Dehalobacter sp. CF chromosome, complete genomeTyrosine recombinase XerD2e-0653.9
NC_018866:1224748:1228144122814412291571014Dehalobacter sp. DCA chromosome, complete genomephage integrase family protein2e-0653.9
NC_008054:899441:8994418994419005171077Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeIntegrase/recombinase3e-0653.5
NC_015666:252740:2654262654262664631038Halopiger xanaduensis SH-6 chromosome, complete genomeintegrase family protein3e-0653.5
NC_012968:2228943:225078322507832251691909Methylotenera mobilis JLW8, complete genometyrosine recombinase XerD3e-0653.1
NC_007626:959684:994461994461995318858Magnetospirillum magneticum AMB-1, complete genomeIntegrase4e-0653.1
NC_012781:2552723:255584125558412556761921Eubacterium rectale ATCC 33656, complete genomeintegrase/recombinase-like protein4e-0653.1
NC_013926:614206:629210629210630064855Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein5e-0652.8
NC_009348:1064664:106375610637561064667912Aeromonas salmonicida subsp. salmonicida A449, complete genomesite-specific integrase/recombinase5e-0652.8
NC_015144:734726:753581753581754486906Weeksella virosa DSM 16922 chromosome, complete genomeTyrosine recombinase xerC4e-0652.8
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein6e-0652.4
NC_014376:787460:8084978084978095041008Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein6e-0652.4
NC_009712:669647:689909689909690829921Candidatus Methanoregula boonei 6A8, complete genomephage integrase family protein6e-0652.4
NC_014541:4167916:416937741693774170267891Ferrimonas balearica DSM 9799 chromosome, complete genometyrosine recombinase XerC8e-0652
NC_015730:3693391:371579737157973716258462Roseobacter litoralis Och 149 chromosome, complete genome9e-0652