Pre_GI: BLASTP Hits

Some Help

Query: NC_009512:2108686:2109684 Pseudomonas putida F1, complete genome

Start: 2109684, End: 2110019, Length: 336

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4790482:479148047914804791815336Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-48189
NC_002947:4484824:450489445048944505229336Pseudomonas putida KT2440, complete genomehypothetical protein1e-47188
NC_015733:3736104:382762338276233827958336Pseudomonas putida S16 chromosome, complete genomeTusE/DsrC/DsvC family sulfur relay protein9e-41165
NC_008027:2331617:233367123336712334006336Pseudomonas entomophila L48, complete genomesulfite reductase, gamma subunit DsrC-like8e-40162
NC_014532:1873169:187547018754701875826357Halomonas elongata DSM 2581, complete genomehypothetical protein3e-21100
NC_013421:3093995:310972831097283110057330Pectobacterium wasabiae WPP163, complete genomesulfur relay protein, TusE/DsrC/DsvC family3e-1787.4
NC_016514:1627664:163067616306761631011336Enterobacter cloacae EcWSU1 chromosome, complete genomesulfurtransferase tusE3e-1787
NC_009465:813816:825744825744826067324Candidatus Vesicomyosocius okutanii HA, complete genomeintracellular sulfur oxidation protein DsrC5e-1786.3
NC_003143:1630000:163909316390931639419327Yersinia pestis CO92, complete genomeputative sulfite reductase subunit protein7e-1785.9
NC_006155:1756000:175881317588131759139327Yersinia pseudotuberculosis IP 32953, complete genomeputative sulfite reductase subunit protein7e-1785.9
NC_008150:844727:850998850998851327330Yersinia pestis Antiqua, complete genomeputative sulfite reductase subunit protein7e-1785.9
NC_008149:2802392:284426828442682844597330Yersinia pestis Nepal516, complete genomesulfite reductase subunit protein7e-1785.9
NC_010634:1755548:175906117590611759390330Yersinia pseudotuberculosis PB1/+, complete genomeTusE/DsrC/DsvC family sulfur relay protein7e-1785.9
NC_014029:1702338:170860917086091708938330Yersinia pestis Z176003 chromosome, complete genomesulfite reductase7e-1785.9
NC_017154:1644404:165067616506761651005330Yersinia pestis D106004 chromosome, complete genomesulfite reductase7e-1785.9
NC_017160:1628500:163117116311711631500330Yersinia pestis D182038 chromosome, complete genomesulfite reductase7e-1785.9
NC_017168:3977767:401956140195614019890330Yersinia pestis A1122 chromosome, complete genomesulfite reductase7e-1785.9
NC_007712:1712667:171486417148641715190327Sodalis glossinidius str. 'morsitans', complete genomeputative sulfite reductase1e-1685.1
NC_011205:1147556:115233111523311152660330Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sulfur transfer protein TusE2e-1684.7
NC_011147:1802535:181932618193261819655330Salmonella enterica subsp. enterica serovar Paratyphi A strsulfur transfer protein TusE2e-1684.7
NC_011094:1127983:113275811327581133087330Salmonella enterica subsp. enterica serovar Schwarzengrund strsulfur transfer protein TusE2e-1684.7
NC_003197:1170746:117385211738521174181330Salmonella typhimurium LT2, complete genomeputative sulfite reductase gamma subunit2e-1684.7
NC_010102:2020762:203385620338562034185330Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1684.7
NC_011083:1173802:117857711785771178906330Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sulfurtransferase TusE2e-1684.7
NC_004631:1881214:189688618968861897215330Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein in helD-serT intergenic region2e-1684.7
NC_006511:1808815:182414318241431824472330Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein in helD-serT intergenic region2e-1684.7
NC_003198:1078113:108359810835981083927330Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein in helD-serT intergenic region2e-1684.7
NC_012125:2687980:270108527010852701414330Salmonella enterica subsp. enterica serovar Paratyphi C strainsulfur transfer protein TusE2e-1684.7
NC_016810:1126693:113017411301741130503330Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1684.7
NC_016832:1880174:189373618937361894065330Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sulfurtransferase tusE2e-1684.7
NC_016831:1950650:196375319637531964082330Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1684.7
NC_011294:1048223:105170410517041052033330Salmonella enterica subsp. enterica serovar Enteritidis strsulfur transfer protein TusE1e-1684.7
NC_011274:1057887:106099310609931061322330Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sulfur transfer protein TusE1e-1684.7
NC_011149:1035990:104340810434081043737330Salmonella enterica subsp. enterica serovar Agona str. SL483,sulfurtransferase TusE1e-1684.7
NC_017046:1127325:113043111304311130760330Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1684.7
NC_016863:1128381:113148711314871131816330Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1sulfur transfer protein TusE2e-1684.7
NC_016860:1168431:117153711715371171866330Salmonella enterica subsp. enterica serovar Typhimurium strsulfur transfer complex subunit TusE2e-1684.7
NC_016857:1126693:113017411301741130503330Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74sulfur transfer protein TusE2e-1684.7
NC_016856:1128715:113219611321961132525330Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssulfurtransferase TusE2e-1684.7
NC_010067:1829041:185133618513361851665330Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1684.3
NC_012880:3125261:314343231434323143761330Dickeya dadantii Ech703, complete genomesulfur relay protein, TusE/DsrC/DsvC family4e-1683.6
NC_014618:2989000:300292730029273003256330Enterobacter cloacae SCF1 chromosome, complete genomeTusE/DsrC/DsvC family sulfur relay protein4e-1683.6
NC_013716:1138441:114168111416811142007327Citrobacter rodentium ICC168, complete genomesulfurtransferase (tRNA 2-thiouridine synthesizing protein E)3e-1683.6
NC_020181:2097066:212265021226502122979330Enterobacter aerogenes EA1509E, complete genometRNA 2-thiouridine synthesizing protein E3e-1683.6
NC_015424:3277292:327948232794823279832351Aeromonas veronii B565 chromosome, complete genomesulfurtransferase tusE6e-1682.8
NC_004061:498483:513763513763514107345Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomehypothetical 12.4 kDa protein1e-1375.5
NC_017253:509494:513524513524513868345Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,sulfur transfer protein (YccK)4e-1373.6
NC_002528:505951:512622512622512966345Buchnera aphidicola str. APS (Acyrthosiphon pisum), completehypothetical protein4e-1373.6
NC_015572:1974000:199314519931451993477333Methylomonas methanica MC09 chromosome, complete genomesulfur relay protein, TusE/DsrC/DsvC family4e-1373.6
NC_017259:480656:491508491508491843336Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,sulfur transfer protein2e-1270.9
NC_007644:1638083:166764416676441667961318Moorella thermoacetica ATCC 39073, complete genomeDsrC-like protein1e-1065.1
NC_015499:1403447:141534914153491415666318Thermodesulfobium narugense DSM 14796 chromosome, complete genomesulfur relay protein, TusE/DsrC/DsvC family1e-0858.5
NC_016885:809000:857881857881858216336Pyrobaculum oguniense TE7 chromosome, complete genomeTusE/DsrC/DsvC family sulfur relay protein1e-0755.1
NC_010525:285805:302062302062302397336Thermoproteus neutrophilus V24Sta, complete genomesulfur relay protein, TusE/DsrC/DsvC family2e-0754.7
NC_009376:794562:807013807013807348336Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDsrC family protein2e-0754.7
NC_016070:371185:378390378390378725336Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit gamma2e-0754.3
NC_016885:809000:819809819809820084276Pyrobaculum oguniense TE7 chromosome, complete genomeTusE/DsrC/DsvC family sulfur relay protein2e-0650.8
NC_016885:809000:844246844246844581336Pyrobaculum oguniense TE7 chromosome, complete genomeTusE/DsrC/DsvC family sulfur relay protein3e-0650.8