Pre_GI: BLASTP Hits

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Query: NC_009092:1874888:1911025 Shewanella loihica PV-4, complete genome

Start: 1911025, End: 1911456, Length: 432

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015276:565701:585126585126585536411Marinomonas mediterranea MMB-1 chromosome, complete genomeferric uptake regulator, Fur family8e-41165
NC_007912:3466966:346696634669663467373408Saccharophagus degradans 2-40, complete genomeHelix-turn-helix, AraC type2e-39160
NC_014366:2826575:283941928394192839853435Gamma proteobacterium HdN1, complete genomeFerric-uptake regulator4e-37153
NC_016002:3077648:308504730850473085475429Pseudogulbenkiania sp. NH8B, complete genomeFur family ferric uptake regulator2e-36150
NC_005773:4797242:479981247998124800315504Pseudomonas syringae pv. phaseolicola 1448A, complete genomeferric uptake regulation protein1e-35147
NC_007005:4992730:499528249952824995689408Pseudomonas syringae pv. syringae B728a, complete genomeFerric-uptake regulator2e-35147
NC_003919:1716831:175084917508491751259411Xanthomonas axonopodis pv. citri str. 306, complete genomeferric uptake regulator6e-34142
NC_018012:121793:124163124163124726564Thiocystis violascens DSM 198 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein3e-32137
NC_016147:1672482:169268516926851693089405Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeFur family ferric uptake regulator4e-32136
NC_011071:1773847:179028617902861790693408Stenotrophomonas maltophilia R551-3, complete genomeferric uptake regulator, Fur family9e-31132
NC_010336:996661:100262610026261003045420Francisella philomiragia subsp. philomiragia ATCC 25017, completeferric uptake regulation protein2e-27120
NC_015696:517941:523888523888524352465Francisella sp. TX077308 chromosome, complete genomeferric uptake regulation protein FUR3e-26116
NC_010677:96470:102363102363102785423Francisella tularensis subsp. mediasiatica FSC147, complete genomeferric uptake regulation protein7e-24108
NC_006570:24636:305293052930951423Francisella tularensis subsp. tularensis Schu 4, complete genomeferric uptake regulation protein7e-24108
NC_008245:24652:305453054530967423Francisella tularensis subsp. tularensis FSC 198, complete genomeferric uptake regulation protein7e-24108
NC_009257:109528:115423115423115845423Francisella tularensis subsp. tularensis WY96-3418 chromosome,ferric uptake regulation protein7e-24108
NC_016933:24654:305473054730969423Francisella tularensis TIGB03 chromosome, complete genomeFerric uptake regulation protein FUR7e-24108
NC_016937:24654:305473054730969423Francisella tularensis subsp. tularensis TI0902 chromosome,Ferric uptake regulation protein FUR7e-24108
NC_019978:2036779:204052320405232040954432Halobacteroides halobius DSM 5150, complete genomeFe2+/Zn2+ uptake regulation protein5e-23106
NC_002939:1505701:150792015079201508351432Geobacter sulfurreducens PCA, complete genomeferric uptake regulation protein Fur5e-22102
NC_009525:2635792:265361826536182654010393Mycobacterium tuberculosis H37Ra, complete genomeferric uptake regulation protein FurB1e-2098.2
NC_012943:1769445:177166117716611772053393Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeferric uptake regulation protein furB1e-2098.2
NC_016768:1769332:177154817715481771940393Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeferric uptake regulation protein furB1e-2098.2
NC_020409:621792:674484674484674921438Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFerric uptake regulation protein2e-2097.8
NC_007626:1038214:106976710697671070192426Magnetospirillum magneticum AMB-1, complete genomeFe2+/Zn2+ uptake regulation protein9e-2095.5
NC_015848:2684275:270026327002632700655393Mycobacterium canettii CIPT 140010059, complete genomeputative ferric uptake regulation protein FURB8e-2095.5
NC_008510:995612:101641010164101016892483Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1,FUR family transcriptional regulator2e-1994.4
NC_018870:1506918:151338915133891513829441Thermacetogenium phaeum DSM 12270 chromosome, complete genomeferric uptake regulation protein Fur1e-1892
NC_015687:1811573:183244718324471832902456Clostridium acetobutylicum DSM 1731 chromosome, complete genomeferric uptake regulation protein3e-1890.5
NC_003030:1811820:183084718308471831302456Clostridium acetobutylicum ATCC 824, complete genomeFerric uptake regulation protein3e-1890.5
NC_017295:1809386:183026018302601830715456Clostridium acetobutylicum EA 2018 chromosome, complete genomeFerric uptake regulation protein3e-1890.5
NC_010612:4501414:451795845179584518371414Mycobacterium marinum M, complete genomeZinc uptake regulation protein Zur5e-1889.7
NC_008593:1461771:146939614693961469848453Clostridium novyi NT, complete genomeferric uptake regulation protein6e-1889.4
NC_016887:1680338:169742616974261697860435Nocardia cyriacigeorgica GUH-2, complete genomeferric uptake regulator1e-1788.6
NC_009699:2733529:274603327460332746485453Clostridium botulinum F str. Langeland chromosome, complete genomeFUR family transcriptional regulator3e-1787
NC_009495:2685646:269806926980692698521453Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeFUR family transcriptional regulator3e-1787
NC_014328:1307490:131779513177951318253459Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeferric uptake regulation protein4e-1786.7
NC_007677:3316540:334114833411483341690543Salinibacter ruber DSM 13855, complete genomeferric uptake regulation protein7e-1785.9
NC_020411:765500:780472780472780930459Hydrogenobaculum sp. HO, complete genomeferric uptake regulator, Fur family1e-1685.5
NC_015587:765500:780500780500780958459Hydrogenobaculum sp. SHO chromosome, complete genomeferric uptake regulator, Fur family1e-1685.5
NC_011126:779500:794469794469794927459Hydrogenobaculum sp. Y04AAS1, complete genomeferric uptake regulator, Fur family1e-1685.5
NC_015557:765500:780445780445780903459Hydrogenobaculum sp. 3684 chromosome, complete genomeferric uptake regulator, Fur family1e-1685.5
NC_014377:1298806:130155113015511302018468Thermosediminibacter oceani DSM 16646 chromosome, complete genomeferric uptake regulator, Fur family3e-1684
NC_021182:2422226:244500824450082445472465Clostridium pasteurianum BC1, complete genomeFe2+/Zn2+ uptake regulation protein9e-1682.4
NC_014391:4617688:461872646187264619130405Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeferric-uptake regulator2e-1581.3
NC_017187:691769:691769691769692236468Arcobacter butzleri ED-1, complete genomeferric uptake regulation protein1e-1478.6
NC_016027:346768:353965353965354390426Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator1e-1478.6
NC_015380:303215:320127320127320570444Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeferric uptake regulation protein FUR2e-1477.4
NC_005090:1921154:193897619389761939434459Wolinella succinogenes DSM 1740, complete genomeFERRIC UPTAKE REGULATION PROTEIN FERRIC UPTAKE REGULATOR2e-1477.4
NC_015957:8845274:884825888482588848683426Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFur family ferric uptake regulator7e-1475.9
NC_019897:2004050:202674620267462027201456Thermobacillus composti KWC4 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein9e-1475.5
NC_019904:5526000:553969555396955540162468Echinicola vietnamensis DSM 17526 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein2e-1374.7
NC_015914:3317029:331930733193073319795489Cyclobacterium marinum DSM 745 chromosome, complete genomeFur family ferric uptake regulator2e-1374.3
NC_011567:388358:398178398178398636459Anoxybacillus flavithermus WK1, complete genomePeroxide regulon repressor PerR, fur family5e-1373.2
NC_018665:650847:655281655281655715435Exiguobacterium antarcticum B7 chromosome, complete genomeFerric uptake regulator, Fur family7e-1372.4
NC_010556:691498:696944696944697378435Exiguobacterium sibiricum 255-15, complete genomeferric uptake regulator, Fur family7e-1372.4
NC_017208:516127:521417521417521845429Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeperoxide operon regulator1e-1271.6
NC_014171:521996:527287527287527715429Bacillus thuringiensis BMB171 chromosome, complete genomeperoxide operon regulator1e-1271.6
NC_012673:2368971:237224823722482372691444Exiguobacterium sp. AT1b, complete genomeferric uptake regulator, Fur family1e-1271.6
NC_012121:1444633:146067414606741461129456Staphylococcus carnosus subsp. carnosus TM300, complete genometranscription regulator Fur family3e-1270.5
NC_017192:1137724:113864111386411139045405Arcobacter sp. L, complete genomeperoxide stress regulator5e-1269.7
NC_018704:645843:655343655343655792450Amphibacillus xylanus NBRC 15112, complete genomeperoxide-responsive repressor PerR1e-1168.6
NC_008820:1143500:114574011457401146300561Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein3e-1167
NC_014721:434501:438500438500438922423Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeferric uptake regulator, fur family6e-1166.2
NC_019757:3563000:357692435769243577328405Cylindrospermum stagnale PCC 7417, complete genomeFe2+/Zn2+ uptake regulation protein8e-1165.9
NC_007777:75885:771997719977627429Frankia sp. CcI3, complete genomeferric uptake regulator, FUR family1e-1065.1
NC_018720:1510084:151266515126651513108444Bifidobacterium asteroides PRL2011 chromosome, complete genomeferric uptake regulator, Fur family3e-1063.9
NC_014246:1730000:174166417416641742089426Mobiluncus curtisii ATCC 43063 chromosome, complete genomeFur family transcriptional regulator3e-1063.5
NC_016001:905164:927594927594928046453Flavobacterium branchiophilum, complete genomeferric iron uptake transcription regulator, Fur5e-1063.2
NC_010296:5278081:529809452980945298477384Microcystis aeruginosa NIES-843, complete genomeferric uptake regulation protein5e-1063.2
NC_008820:2595500:259631125963112596715405Prochlorococcus marinus str. MIT 9303, complete genomeFerric uptake regulator family protein7e-1062.8
NC_019897:3025871:304313930431393043582444Thermobacillus composti KWC4 chromosome, complete genomeFe2+/Zn2+ uptake regulation protein1e-0961.6
NC_014836:2848000:286175128617512862212462Desulfurispirillum indicum S5 chromosome, complete genomeferric-uptake regulator1e-0961.6
NC_003552:1157294:116021011602101160659450Methanosarcina acetivorans C2A, complete genomeferric uptake regulation protein2e-0961.2
NC_020387:1257163:125716312571631257588426Dehalococcoides mccartyi BTF08, complete genometranscriptional regulator, Fur family5e-0959.7
NC_019745:3066177:306617730661773066620444Gloeocapsa sp. PCC 7428, complete genomeferric uptake regulator, Fur family9e-0958.9
NC_004193:950000:955474955474955917444Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0858.5
NC_014328:4073714:409536240953624095835474Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ferric uptake regulator2e-0858.2
NC_013947:1956923:197105919710591971478420Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeferric uptake regulator, Fur family2e-0857.8
NC_016111:2651500:267271726727172673148432Streptomyces cattleya NRRL 8057, complete genomeIron uptake regulatory protein3e-0857.4
NC_016048:1390463:140720014072001407613414Oscillibacter valericigenes Sjm18-20, complete genomeputative Fur family transcriptional regulator3e-0857.4
NC_010617:558954:577184577184577627444Kocuria rhizophila DC2201, complete genomeFur family transcriptional regulator5e-0856.6
NC_014216:2860342:287913128791312879580450Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeferric uptake regulator, Fur family1e-0755.5
NC_014219:2931796:294374629437462944189444Bacillus selenitireducens MLS10 chromosome, complete genomeferric uptake regulator, Fur family1e-0755.1
NC_015913:1248000:125185212518521252280429Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeferric uptake regulation protein2e-0754.7
NC_013510:2288746:229245522924552292868414Thermomonospora curvata DSM 43183, complete genomeferric uptake regulator, Fur family2e-0754.3
NC_009380:2310000:232434523243452324950606Salinispora tropica CNB-440 chromosome, complete genomeferric-uptake regulator5e-0753.1
NC_013161:1878700:190339519033951903838444Cyanothece sp. PCC 8802, complete genomeferric uptake regulator, Fur family7e-0752.8
NC_011726:1911500:193356819335681934011444Cyanothece sp. PCC 8801, complete genomeferric uptake regulator, Fur family7e-0752.8
NC_007576:471500:478071478071478523453Lactobacillus sakei subsp. sakei 23K, complete genomePutative transcriptional regulator, Fur family7e-0752.8
NC_014972:3227500:323052832305283230944417Desulfobulbus propionicus DSM 2032 chromosome, complete genomeFur family ferric uptake regulator6e-0752.8
NC_007516:2383097:238269023826902383100411Synechococcus sp. CC9605, complete genomeputative ferric uptake regulator, FUR family8e-0752.4
NC_016906:839406:840702840702841172471Gordonia polyisoprenivorans VH2 chromosome, complete genomeferric-uptake regulator4e-0650.4
NC_005070:2308363:231005023100502310454405Synechococcus sp. WH 8102, complete genomeFerric uptake regulator family4e-0650.1
NC_014654:1802007:180312018031201803512393Halanaerobium sp. 'sapolanicus' chromosome, complete genomeferric uptake regulator, Fur family5e-0650.1
NC_000853:1480478:151118415111841511594411Thermotoga maritima MSB8, complete genomeferric uptake regulation protein6e-0649.7