Pre_GI: BLASTP Hits

Some Help

Query: NC_009012:574145:587106 Clostridium thermocellum ATCC 27405, complete genome

Start: 587106, End: 588077, Length: 972

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:1075592:108001510800151080806792Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook capping protein8e-43174
NC_016584:4363382:438370943837094384500792Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook capping protein4e-38159
NC_020134:586840:5998545998546008671014Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar hook capping protein FlgD1e-36153
NC_014652:628435:643647643647644141495Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar hook capping protein3e-27122
NC_017238:272980:293892293892294335444Borrelia afzelii PKo chromosome, complete genomeflagellar hook assembly scaffolding protein1e-1790.9
NC_014377:1060000:108066710806671081056390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar hook capping protein6e-1788.6
NC_010718:1454087:147045414704541470891438Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar hook capping protein9e-1787.8
NC_009633:2725128:273142827314282731832405Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar hook capping protein1e-1687.8
NC_010673:291679:297500297500297934435Borrelia hermsii DAH, complete genomebasal-body rod modification protein FlgD1e-1687.4
NC_011728:269853:294153294153294596444Borrelia burgdorferi ZS7, complete genomeflagellar basal body rod modification protein1e-1687.4
NC_006156:271410:293552293552293995444Borrelia garinii PBi chromosome linear, complete sequenceflagellar hook assembly protein2e-1687
NC_008710:277207:296791296791297225435Borrelia turicatae 91E135, complete genomebasal-body rod modification protein FlgD4e-1685.5
NC_011883:1478173:148163614816361482490855Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,flagellar hook capping protein1e-1377.8
NC_019978:625476:638719638719639129411Halobacteroides halobius DSM 5150, complete genomeflagellar hook capping protein2e-1377
NC_015714:768500:788290788290788751462Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar basal body rod modification protein FlgD2e-1377
NC_000919:773784:793408793408793869462Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar hook assembly protein2e-1377
NC_016843:775371:795179795179795640462Treponema pallidum subsp. pertenue str. Gauthier chromosome,flagellar basal body rod modification protein FlgD2e-1377
NC_016844:775334:795346795346795807462Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar basal body rod modification protein FlgD2e-1377
NC_016848:775822:795446795446795907462Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeflagellar basal body rod modification protein FlgD2e-1377
NC_017268:775000:794658794658795119462Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar hook capping protein2e-1377
NC_021508:775264:794888794888795349462Treponema pallidum subsp. pallidum SS14, complete genomeflagellar basal body rod modification protein FlgD2e-1377
NC_018664:1663324:167729716772971677779483Clostridium acidurici 9a chromosome, complete genomeflagellar basal body rod modification protein FlgD1e-1274.3
NC_011653:1616423:164155916415591642227669Thermosipho africanus TCF52B, complete genomebasal-body rod modification protein FlgD2e-1273.6
NC_003212:721112:729361729361729783423Listeria innocua Clip11262, complete genomeflagellar hook assembly protein3e-1169.7
NC_008593:1103293:111622911162291117053825Clostridium novyi NT, complete genomeflagellar hook assembly protein FlgD4e-1168.9
NC_007645:4195500:422568142256814226091411Hahella chejuensis KCTC 2396, complete genomeFlagellar hook capping protein5e-1168.9
NC_003210:721824:730074730074730496423Listeria monocytogenes EGD-e, complete genomeflagellar hook assembly protein7e-1168.6
NC_013766:757987:767597767597768019423Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar basal body rod modification protein7e-1168.6
NC_013768:721897:734301734301734723423Listeria monocytogenes 08-5923, complete genomeflagellar basal body rod modification protein7e-1168.6
NC_009664:533021:545381545381545908528Kineococcus radiotolerans SRS30216, complete genomeflagellar hook capping protein6e-1168.6
NC_016011:678419:683574683574683996423Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar hook assembly protein6e-1168.6
NC_009253:2615777:262294326229432623500558Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar hook capping protein8e-1168.2
NC_012488:732233:738558738558738980423Listeria monocytogenes Clip81459, complete genomeflagellar basal body rod modification protein1e-1067.8
NC_011660:1889504:191475419147541915176423Listeria monocytogenes HCC23 chromosome, complete genomeflagellar basal body rod modification protein1e-1067.8
NC_002973:730942:744566744566744988423Listeria monocytogenes str. 4b F2365, complete genomeflagellar hook assembly protein1e-1067.8
NC_009617:4911595:4919690491969049207091020Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook capping protein1e-1067.4
NC_016894:2931213:294406829440682944487420Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar hook protein FlgD2e-1066.6
NC_013223:685628:700295700295700978684Desulfohalobium retbaense DSM 5692, complete genomeflagellar hook capping protein3e-1066.2
NC_016751:1979201:198640119864011987069669Marinitoga piezophila KA3 chromosome, complete genomeflagellar hook capping protein4e-1065.9
NC_011772:1575674:158030715803071580885579Bacillus cereus G9842, complete genomeflagellar hook assembly protein family protein9e-1064.7
NC_010520:2860960:286840328684032869200798Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook capping protein9e-0961.2
NC_009697:2714668:271996827199682720765798Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook capping protein9e-0961.2
NC_009698:2649453:265689526568952657692798Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook capping protein9e-0961.2
NC_017297:2854934:285493428549342855755822Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook capping protein1e-0860.8
NC_010723:833870:843162843162844127966Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar hook assembly protein FlgD2e-0860.5
NC_010674:858397:864844864844865809966Clostridium botulinum B str. Eklund 17B, complete genomeflagellar hook assembly protein FlgD2e-0860.5
NC_009831:66518:782727827278937666Shewanella sediminis HAW-EB3, complete genomeflagellar hook capping protein2e-0860.1
NC_006677:435652:450651450651451391741Gluconobacter oxydans 621H, complete genomeBasal-body rod modification protein FlgD4e-0755.8
NC_021182:2883716:290370229037022904220519Clostridium pasteurianum BC1, complete genomeflagellar hook capping protein7e-0755.1
NC_010334:1701957:172506017250601725863804Shewanella halifaxensis HAW-EB4, complete genomeflagellar hook capping protein1e-0654.3
NC_009997:3661083:366603036660303666800771Shewanella baltica OS195, complete genomeflagellar hook capping protein1e-0653.9
NC_008576:4467745:448271444827144483388675Magnetococcus sp. MC-1, complete genomeflagellar hook capping protein2e-0653.5
NC_015424:2917817:292579129257912926531741Aeromonas veronii B565 chromosome, complete genomeflagellar hook capping protein3e-0653.1
NC_020291:4903981:4930617493061749318251209Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook protein FlgD4e-0652.8