Pre_GI Gene

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Host: NC_011883 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011883:1478173 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,

Host Lineage: Desulfovibrio desulfuricans; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 was isolated from the rumen of a sheep. D. desulfuricans reduces sulfate to sulfide found in soil, freshwater, saltwater and the intestinal tract of animals. This organism grows anaerobically and utilizes a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite, as well as others. The nitrate reduction pathway is not expressed while sulfate is available. Alternatively, the sulfate reduction pathway is constitutively expressed when the cells are growing with nitrate reduction. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making this organism of interest as bioremediator. Metal corrosion, a problem that is partly the result of the collective activity of this bacterium, results in billions of dollars in losses each year to the petroleum industry. This organism is responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
147640114781761776CgeB family proteinQuickGO ontologyBLASTP
147817314795881416glycosyl transferase family 9QuickGO ontologyBLASTP
147975114816101860flagellar hook-length control proteinQuickGO ontology
14816361482490855flagellar hook capping proteinQuickGO ontologyBLASTP
148260214850282427protein of unknown function DUF1078 domain proteinQuickGO ontologyBLASTP
1485426148550277tRNA-GluQuickGO ontology
14856091486397789Integrase catalytic regionQuickGO ontologyBLASTP
14864541486720267transposase IS3IS911 family proteinQuickGO ontologyBLASTP
148713214872461155S ribosomal RNAQuickGO ontologyBLASTP
148713414872481155S ribosomal RNAQuickGO ontologyBLASTP
14872941490224293123S ribosomal RNAQuickGO ontologyBLASTP
1490371149044676tRNA-AlaQuickGO ontologyBLASTP
1490469149054577tRNA-IleQuickGO ontology
14906271492164153816S ribosomal RNAQuickGO ontologyBLASTP
14928431493283441transcriptional regulator ArsR familyQuickGO ontologyBLASTP
149331314954032091heavy metal translocating P-type ATPaseQuickGO ontologyBLASTP
14954931495870378hypothetical proteinBLASTP
14961181497101984Holliday junction DNA helicase RuvBQuickGO ontologyBLASTP
14971011497715615Holliday junction DNA helicase RuvAQuickGO ontologyBLASTP
149782614988601035molybdenum cofactor biosynthesis protein AQuickGO ontologyBLASTP
14989341499209276hypothetical proteinBLASTP
14992541499850597hypothetical protein
15001511500522372hypothetical proteinBLASTP
150052815018921365RNA modification enzyme MiaB familyQuickGO ontologyBLASTP
15018861502500615protein of unknown function DUF151QuickGO ontologyBLASTP
15026491503053405hypothetical protein
150315715046561500response regulator receiver proteinQuickGO ontologyBLASTP