Pre_GI: BLASTP Hits

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Query: NC_008593:37456:38931 Clostridium novyi NT, complete genome

Start: 38931, End: 39923, Length: 993

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:34861:381903819039107918Clostridium botulinum BKT015925 chromosome, complete genomeputative DNA replication protein DnaD6e-139493
NC_009698:3706154:372376637237663724752987Clostridium botulinum A str. Hall chromosome, complete genomeDNA replication protein DnaD4e-114411
NC_009697:3809044:382665638266563827642987Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA replication protein DnaD4e-114411
NC_009495:3832500:385012238501223851108987Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA replication protein DnaD4e-114411
NC_012658:3923546:394117739411773942163987Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative DNA replication protein DnaD1e-113410
NC_012563:4101000:411864141186414119627987Clostridium botulinum A2 str. Kyoto, complete genomeputative DNA replication protein DnaD5e-114410
NC_010520:3938490:395611739561173957103987Clostridium botulinum A3 str. Loch Maree, complete genomeputative DNA replication protein DnaD1e-113409
NC_017297:3939328:395694339569433957929987Clostridium botulinum F str. 230613 chromosome, complete genomeputative DNA replication protein DnaD3e-113408
NC_009699:3940984:395860039586003959586987Clostridium botulinum F str. Langeland chromosome, complete genomeDNA replication protein DnaD3e-113408
NC_010516:3903867:392147539214753922461987Clostridium botulinum B1 str. Okra, complete genomeputative DNA replication protein DnaD5e-113407
NC_004557:81362:837638376384737975Clostridium tetani E88, complete genomeDNA replication protein dnaD1e-112406
NC_021182:4882494:490648049064804907460981Clostridium pasteurianum BC1, complete genomeDnaD-like protein5e-111401
NC_017295:3762622:378649037864903787476987Clostridium acetobutylicum EA 2018 chromosome, complete genomeDNA replication protein DnaD8e-111400
NC_003030:3763054:378713837871383788124987Clostridium acetobutylicum ATCC 824, complete genomeDNA replication protein DnaD8e-111400
NC_015687:3766000:378872137887213789707987Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA replication protein DnaD8e-111400
NC_014328:4546390:456208545620854563083999Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative DNA replication protein DnaD5e-107387
NC_014624:140000:1575011575011585201020Eubacterium limosum KIST612 chromosome, complete genomeputative DNA replication protein DnaD1e-31137
NC_014392:1935130:1953234195323419542531020Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeprimosome, DnaD subunit9e-26117
NC_014652:757381:7725837725837736021020Caldicellulosiruptor hydrothermalis 108 chromosome, completeprimosome, dnad subunit7e-25114
NC_006177:3457637:3480433348043334814641032Symbiobacterium thermophilum IAM 14863, complete genomeputative chromosome replication initiation protein7e-1581.6
NC_005945:1459357:147900714790071479714708Bacillus anthracis str. Sterne, complete genomeDNA replication protein DnaD3e-0653.1
NC_007530:1459412:147905314790531479760708Bacillus anthracis str. 'Ames Ancestor', complete genomedna replication protein dnad3e-0653.1