Pre_GI: BLASTP Hits

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Query: NC_008593:37456:37946 Clostridium novyi NT, complete genome

Start: 37946, End: 38938, Length: 993

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:34861:372053720538164960Clostridium botulinum BKT015925 chromosome, complete genomeDNA replication protein DnaC2e-126452
NC_021182:4882494:490745349074534908436984Clostridium pasteurianum BC1, complete genomeDNA replication protein7e-96350
NC_010520:3938490:395709639570963958073978Clostridium botulinum A3 str. Loch Maree, complete genomeputative DNA replication protein DnaC4e-86318
NC_009698:3706154:372474537247453725722978Clostridium botulinum A str. Hall chromosome, complete genomeDNA replication protein DnaC4e-86318
NC_009697:3809044:382763538276353828612978Clostridium botulinum A str. ATCC 19397 chromosome, completeDNA replication protein DnaC4e-86318
NC_009495:3832500:385110138511013852078978Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA replication protein DnaC4e-86318
NC_012658:3923546:394215639421563943133978Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA replication protein DnaC4e-85315
NC_009699:3940984:395957939595793960556978Clostridium botulinum F str. Langeland chromosome, complete genomeDNA replication protein DnaC3e-85315
NC_017297:3939328:395792239579223958899978Clostridium botulinum F str. 230613 chromosome, complete genomeputative DNA replication protein DnaC3e-85315
NC_010516:3903867:392245439224543923431978Clostridium botulinum B1 str. Okra, complete genomeputative DNA replication protein DnaC2e-85315
NC_014328:4546390:456307645630764564062987Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative DNA replication protein DnaC1e-84313
NC_017295:3762622:378746937874693788452984Clostridium acetobutylicum EA 2018 chromosome, complete genomeDNA replication protein DnaC1e-84313
NC_015687:3766000:378969437896943790683990Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA replication protein DnaC8e-85313
NC_003030:3763054:378811137881113789100990Clostridium acetobutylicum ATCC 824, complete genomeDNA replication protein DnaC8e-85313
NC_012563:4101000:411962041196204120597978Clostridium botulinum A2 str. Kyoto, complete genomeputative DNA replication protein DnaC6e-84311
NC_004557:81362:827778277783766990Clostridium tetani E88, complete genomeDNA replication protein DnaC8e-83307
NC_014624:140000:156537156537157508972Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-38158
NC_014392:1935130:1954240195424019552681029Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeAAA ATPase2e-33143
NC_014652:757381:7715567715567725961041Caldicellulosiruptor hydrothermalis 108 chromosome, completeaaa atpase1e-31137
NC_006177:3457637:3479451347945134804761026Symbiobacterium thermophilum IAM 14863, complete genomeDNA replication protein DnaC3e-2099.8
NC_018870:1506918:151971615197161520501786Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIstB-like ATP-binding protein1e-0654.3
NC_012034:2623252:262431226243122625097786Anaerocellum thermophilum DSM 6725, complete genomeAAA ATPase4e-0652.4
NC_012658:2525931:253601325360132536801789Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein6e-0652