Pre_GI: BLASTP Hits

Some Help

Query: NC_008593:1103293:1116229 Clostridium novyi NT, complete genome

Start: 1116229, End: 1117053, Length: 825

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2854934:285493428549342855755822Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook capping protein2e-40166
NC_009698:2649453:265689526568952657692798Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook capping protein5e-39161
NC_009697:2714668:271996827199682720765798Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook capping protein5e-39161
NC_010520:2860960:286840328684032869200798Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook capping protein5e-39161
NC_021182:2883716:290370229037022904220519Clostridium pasteurianum BC1, complete genomeflagellar hook capping protein6e-30131
NC_014328:1135854:113925511392551139974720Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar hook protein FlgD4e-28125
NC_010723:833870:843162843162844127966Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar hook assembly protein FlgD2e-24112
NC_010674:858397:864844864844865809966Clostridium botulinum B str. Eklund 17B, complete genomeflagellar hook assembly protein FlgD2e-24112
NC_009617:4911595:4919690491969049207091020Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook capping protein2e-22106
NC_020291:4903981:4930617493061749318251209Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook protein FlgD3e-1582.4
NC_014652:628435:643647643647644141495Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar hook capping protein1e-1273.6
NC_016584:4363382:438370943837094384500792Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook capping protein6e-1271.6
NC_009012:574145:587106587106588077972Clostridium thermocellum ATCC 27405, complete genomeflagellar hook capping protein3e-1168.9
NC_015172:1075592:108001510800151080806792Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook capping protein4e-1168.6
NC_019978:625476:638719638719639129411Halobacteroides halobius DSM 5150, complete genomeflagellar hook capping protein6e-1168.2
NC_009253:2615777:262294326229432623500558Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar hook capping protein4e-1065.5
NC_020134:586840:5998545998546008671014Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar hook capping protein FlgD4e-1065.5
NC_009633:2725128:273142827314282731832405Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar hook capping protein6e-1065.1
NC_014377:1060000:108066710806671081056390Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar hook capping protein5e-1065.1
NC_000919:773784:793408793408793869462Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar hook assembly protein2e-0963.2
NC_016843:775371:795179795179795640462Treponema pallidum subsp. pertenue str. Gauthier chromosome,flagellar basal body rod modification protein FlgD2e-0963.2
NC_016844:775334:795346795346795807462Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar basal body rod modification protein FlgD2e-0963.2
NC_016848:775822:795446795446795907462Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeflagellar basal body rod modification protein FlgD2e-0963.2
NC_017268:775000:794658794658795119462Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar hook capping protein2e-0963.2
NC_021508:775264:794888794888795349462Treponema pallidum subsp. pallidum SS14, complete genomeflagellar basal body rod modification protein FlgD2e-0963.2
NC_015714:768500:788290788290788751462Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar basal body rod modification protein FlgD2e-0962.8
NC_010718:1454087:147045414704541470891438Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar hook capping protein2e-0859.7
NC_011883:1478173:148163614816361482490855Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,flagellar hook capping protein3e-0859.3
NC_008710:277207:296791296791297225435Borrelia turicatae 91E135, complete genomebasal-body rod modification protein FlgD3e-0858.9
NC_010673:291679:297500297500297934435Borrelia hermsii DAH, complete genomebasal-body rod modification protein FlgD9e-0857.8
NC_013223:685628:700295700295700978684Desulfohalobium retbaense DSM 5692, complete genomeflagellar hook capping protein7e-0857.8
NC_011728:269853:294153294153294596444Borrelia burgdorferi ZS7, complete genomeflagellar basal body rod modification protein3e-0755.8
NC_006156:271410:293552293552293995444Borrelia garinii PBi chromosome linear, complete sequenceflagellar hook assembly protein4e-0755.5
NC_017238:272980:293892293892294335444Borrelia afzelii PKo chromosome, complete genomeflagellar hook assembly scaffolding protein5e-0755.1
NC_018664:1663324:167729716772971677779483Clostridium acidurici 9a chromosome, complete genomeflagellar basal body rod modification protein FlgD2e-0653.1
NC_016894:2931213:294406829440682944487420Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar hook protein FlgD2e-0652.8
NC_009831:66518:782727827278937666Shewanella sediminis HAW-EB3, complete genomeflagellar hook capping protein3e-0652.8
NC_016751:1979201:198640119864011987069669Marinitoga piezophila KA3 chromosome, complete genomeflagellar hook capping protein3e-0652.4
NC_011653:1616423:164155916415591642227669Thermosipho africanus TCF52B, complete genomebasal-body rod modification protein FlgD5e-0652