Pre_GI: BLASTP Hits

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Query: NC_008530:469802:474323 Lactobacillus gasseri ATCC 33323, complete genome

Start: 474323, End: 474940, Length: 618

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013504:447891:452403452403453020618Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein9e-87319
NC_005362:550823:555344555344555952609Lactobacillus johnsonii NCC 533, complete genomehypothetical protein4e-86317
NC_015602:117939:122497122497123105609Lactobacillus kefiranofaciens ZW3 chromosome, complete genomehypothetical protein2e-50198
NC_014724:439594:447340447340447948609Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein3e-48191
NC_015214:437733:444612444612445220609Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein6e-46183
NC_018528:446610:452265452265452873609Lactobacillus helveticus R0052 chromosome, complete genomeMembrane protein2e-45182
NC_010080:445398:448172448172448780609Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein5e-45180
NC_006814:403723:411003411003411611609Lactobacillus acidophilus NCFM, complete genomehypothetical protein7e-41166
NC_014106:419511:425106425106425714609Lactobacillus crispatus ST1, complete genomeMembrane protein7e-40163
NC_014727:1537183:155327615532761553881606Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,membrane protein1e-34146
NC_014334:769205:770640770640771263624Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein4e-22104
NC_010999:880878:881660881660882283624Lactobacillus casei, complete genomePutative uncharacterized protein ylfI4e-22104
NC_008526:817628:819063819063819686624Lactobacillus casei ATCC 334, complete genomePredicted membrane protein4e-22104
NC_016605:766836:771932771932772564633Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehypothetical protein1e-1996.3
NC_013199:811929:812706812706813338633Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)1e-1996.3
NC_013198:813830:818158818158818790633Lactobacillus rhamnosus GG, complete genomeconserved hypothetical protein (integral membrane protein by homology)2e-1995.5
NC_012470:853561:856218856218856859642Streptococcus equi subsp. zooepidemicus, complete genomemembrane protein5e-1890.9
NC_011134:1222739:123839712383971239044648Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical membrane spanning protein9e-1890.1
NC_008525:1202852:121695612169561217582627Pediococcus pentosaceus ATCC 25745, complete genomePredicted membrane protein1e-1686.7
NC_015975:1493636:151386915138691514495627Lactobacillus ruminis ATCC 27782 chromosome, complete genomeintergral membrane protein2e-1685.5
NC_007576:435713:441074441074441715642Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical integral membrane protein5e-1580.9
NC_012004:1053682:105693610569361057559624Streptococcus uberis 0140J, complete genomemembrane protein1e-1479.7
NC_007929:473500:477044477044477688645Lactobacillus salivarius subsp. salivarius UCC118, complete genomeHypothetical membrane spanning protein7e-1477
NC_014393:3650957:365335536533553653984630Clostridium cellulovorans 743B chromosome, complete genomeintegral membrane protein TIGR019063e-1271.6
NC_009513:618000:622461622461623114654Lactobacillus reuteri F275, complete genomeintegral membrane protein TIGR019061e-1170.1
NC_015697:1814128:181948918194891820142654Lactobacillus reuteri SD2112 chromosome, complete genomeintegral membrane protein2e-1168.9
NC_008262:2498000:250201825020182502668651Clostridium perfringens SM101, complete genomeintegral membrane protein2e-1168.9
NC_010674:3674739:368027836802783680958681Clostridium botulinum B str. Eklund 17B, complete genomeintegral membrane protein1e-1066.6
NC_010723:3530000:353746035374603538140681Clostridium botulinum E3 str. Alaska E43, complete genomeintegral membrane protein1e-0963.2
NC_007530:1459412:146091814609181461604687Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein4e-0961.2
NC_005945:1459357:146087214608721461558687Bacillus anthracis str. Sterne, complete genomehypothetical protein4e-0961.2
NC_021182:1473535:148854114885411489209669Clostridium pasteurianum BC1, complete genomeintegral membrane protein TIGR019062e-0859.3
NC_004557:2552418:255468325546832555321639Clostridium tetani E88, complete genomemembrane spanning protein1e-0756.6