Pre_GI: BLASTP Hits

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Query: NC_008268:7576365:7585407 Rhodococcus sp. RHA1, complete genome

Start: 7585407, End: 7586723, Length: 1317

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:511034:5137195137195148401122Nocardia cyriacigeorgica GUH-2, complete genomeputative Transporter, MFS superfamily protein2e-32140
NC_014305:97055:1184771184771196791203Erwinia billingiae Eb661 plasmid pEB170, complete sequenceMajor facilitator superfamily2e-25117
NC_015508:296856:3295873295873307951209Agrobacterium sp. H13-3 chromosome linear, complete sequenceputative transporter, permease1e-24114
NC_010682:1482365:1495534149553414967451212Ralstonia pickettii 12J chromosome 1, complete sequencemajor facilitator superfamily MFS_17e-24112
NC_005363:3562205:3569679356967935708721194Bdellovibrio bacteriovorus HD100, complete genomeputative transport protein6e-22105
NC_015458:2441435:2443907244390724451571251Pusillimonas sp. T7-7 chromosome, complete genomemajor facilitator transporter6e-22105
NC_009436:1679265:1683756168375616849581203Enterobacter sp. 638, complete genomemajor facilitator transporter4e-2099.8
NC_002488:1638946:1667542166754216687711230Xylella fastidiosa 9a5c, complete genometranscriptional regulator5e-2099.4
NC_014837:387868:4101264101264113131188Pantoea sp. At-9b chromosome, complete genomemajor facilitator superfamily protein5e-2099.4
NC_015379:2505233:2541831254183125430271197Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transporter, membrane protein4e-1892.8
NC_003295:199354:2301002301002313261227Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSPORTER TRANSMEMBRANE PROTEIN3e-1790.1
NC_011000:2732330:2793364279336427945301167Burkholderia cenocepacia J2315 chromosome 1, complete sequencemajor facilitator superfamily protein6e-1789
NC_013716:4306695:4340981434098143421741194Citrobacter rodentium ICC168, complete genomepurine ribonucleoside efflux pump NepI7e-1685.5
NC_006361:3132000:3148815314881531500051191Nocardia farcinica IFM 10152, complete genomeputative transporter2e-1584.3
NC_015663:3742738:3744662374466237458911230Enterobacter aerogenes KCTC 2190 chromosome, complete genometransport protein, major facilitator superfamily (mfs)3e-1583.6
NC_007005:4515853:4516878451687845181401263Pseudomonas syringae pv. syringae B728a, complete genomeMajor facilitator superfamily3e-1583.6
NC_020181:1653261:1674702167470216759311230Enterobacter aerogenes EA1509E, complete genomePutative transcriptional regulator3e-1583.6
NC_002516:2436304:2440347244034724415551209Pseudomonas aeruginosa PAO1, complete genomemembrane protein OpdE3e-1583.6
NC_012731:2261787:2275363227536322765861224Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative MFS-family transport protein2e-1481.3
NC_012796:129500:1333591333591346001242Desulfovibrio magneticus RS-1, complete genomemajor facilitator superfamily protein1e-1481.3
NC_009792:4693152:4715984471598447172251242Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-1479
NC_008543:2474002:2481643248164324828391197Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemajor facilitator superfamily MFS_18e-1478.6
NC_010515:1900967:1911466191146619126621197Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemajor facilitator superfamily MFS_18e-1478.6
NC_021177:118710:1352731352731364811209Streptomyces fulvissimus DSM 40593, complete genomeArabinose efflux permease9e-1478.6
NC_021066:4177217:4191612419161241927931182Raoultella ornithinolytica B6, complete genomeribonucleoside transporter1e-1378.2
CP002185:4035502:4062707406270740639451239Escherichia coli W, complete genomepredicted transporter2e-1377.8
NC_004337:3590323:3909526390952639108811356Shigella flexneri 2a str. 301, complete genomeputative transport protein2e-1377.8
NC_017328:3935185:3935185393518539365401356Shigella flexneri 2002017 chromosome, complete genomeputative Arabinose efflux permease2e-1377.8
NC_002695:4584177:4626883462688346281211239Escherichia coli O157:H7 str. Sakai, complete genomeputative transport protein1e-1377.8
NC_011353:4688000:4729987472998747312251239Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-1377.8
NC_013941:4470932:4514376451437645156141239Escherichia coli O55:H7 str. CB9615 chromosome, complete genomemajor facilitator family transporter1e-1377.8
NC_011750:4390000:4435348443534844365801233Escherichia coli IAI39 chromosome, complete genomeribonucleoside transporter2e-1377.4
NC_004578:1719849:1739236173923617404441209Pseudomonas syringae pv. tomato str. DC3000, complete genomemajor facilitator family transporter5e-1376.3
NC_003197:3971905:3977385397738539785781194Salmonella typhimurium LT2, complete genomeputative transport protein8e-1375.5
NC_003198:3855157:3870217387021738714101194Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative inner membrane transport protein8e-1375.5
NC_004631:3841975:3855707385570738569001194Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative inner membrane transport protein8e-1375.5
NC_011094:3853036:3857872385787238590651194Salmonella enterica subsp. enterica serovar Schwarzengrund strpurine ribonucleoside efflux pump NepI8e-1375.5
NC_010102:3919999:3925479392547939266721194Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1375.5
NC_011083:3985618:3991594399159439927871194Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-1375.5
NC_011080:3941909:3946745394674539479381194Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-1375.5
NC_012125:3905782:3910618391061839118111194Salmonella enterica subsp. enterica serovar Paratyphi C strainribonucleoside transporter8e-1375.5
NC_016856:3985597:3991077399107739922701194Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sribonucleoside transporter8e-1375.5
NC_016860:3995445:4000281400028140014741194Salmonella enterica subsp. enterica serovar Typhimurium strribonucleoside transporter8e-1375.5
NC_016863:3933848:3938684393868439398771194Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ribonucleoside transporter8e-1375.5
NC_011149:3895921:3901897390189739030901194Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-1375.5
NC_002655:4653160:4695866469586646971041239Escherichia coli O157:H7 EDL933, complete genomeputative transport protein1e-1275.1
NC_013008:4643825:4686028468602846872181191Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeribonucleoside transporter9e-1375.1
NC_010410:3719599:3744538374453837457521215Acinetobacter baumannii AYE, complete genomeputative transporter (MFS superfamily)1e-1274.7
NC_010322:3315024:3329835332983533310431209Pseudomonas putida GB-1 chromosome, complete genomemajor facilitator superfamily transporter2e-1274.3
NC_014258:355845:3737123737123749621251Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative MFS family transporter2e-1273.9
NC_011147:3755725:3761196376119637623891194Salmonella enterica subsp. enterica serovar Paratyphi A strribonucleoside transporter3e-1273.6
NC_006511:3759550:3765517376551737667101194Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative inner membrane transport protein3e-1273.6
NC_011601:4096427:4140655414065541418451191Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeribonucleoside transporter4e-1273.2
NC_011146:896000:9172499172499184031155Geobacter bemidjiensis Bem, complete genomemajor facilitator superfamily MFS_12e-1170.9
NC_016830:4639388:4642006464200646431691164Pseudomonas fluorescens F113 chromosome, complete genomearabinose efflux permease2e-1170.9
NC_010805:530876:5523015523015535241224Burkholderia multivorans ATCC 17616 chromosome 2, completemajor facilitator family transporter3e-1170.1
NC_003888:56225:6668866688679111224Streptomyces coelicolor A3(2), complete genomeintegral membrane transport protein2e-1067.8
NC_013521:2254534:2268435226843522696671233Sanguibacter keddieii DSM 10542, complete genomearabinose efflux permease family protein3e-1066.6
NC_016111:1:6122612273391218Streptomyces cattleya NRRL 8057, complete genomeIntegral membrane transport protein1e-0964.7
NC_009255:1071868:1093385109338510945151131Burkholderia vietnamiensis G4 chromosome 2, complete sequencemajor facilitator transporter2e-0963.9
NC_010086:1907959:1921873192187319230031131Burkholderia multivorans ATCC 17616 chromosome 2, completemajor facilitator superfamily MFS_12e-0963.9
NC_010694:2716348:2719001271900127201881188Erwinia tasmaniensis, complete genomePutative arabinose efflux permease7e-0858.9
NC_011566:1016858:1035851103585110370351185Shewanella piezotolerans WP3, complete genomeMFS transporter, putative9e-0858.5
NC_009436:2056000:2058184205818420593771194Enterobacter sp. 638, complete genomemajor facilitator transporter2e-0757.4
NC_016612:443398:4503014503014515211221Klebsiella oxytoca KCTC 1686 chromosome, complete genomePutative arabinose efflux permease3e-0756.6
NC_002927:3716894:3722269372226937234531185Bordetella bronchiseptica RB50, complete genomeputative sugar efflux transpoter3e-0756.6
NC_004129:4596040:4614170461417046153271158Pseudomonas fluorescens Pf-5, complete genomemajor facilitator family transporter5e-0652.8
NC_015379:3570658:3593354359335435944961143Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative major facilitator transporter7e-0652.4
NC_015723:384000:4053324053324065251194Cupriavidus necator N-1 chromosome 2, complete sequencepurine efflux pump PbuE7e-0652.4