Pre_GI: BLASTP Hits

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Query: NC_008228:776000:782467 Pseudoalteromonas atlantica T6c, complete genome

Start: 782467, End: 783159, Length: 693

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:400214400214400867654Vibrio cholerae IEC224 chromosome II, complete sequencehemagglutinin associated protein2e-77288
NC_016446:49618:100895100895101587693Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehemagglutinin associated protein5e-77287
NC_012667:931390:985200985200985892693Vibrio cholerae MJ-1236 chromosome 2, complete genomehemagglutinin associated protein5e-77287
NC_012583:361241:411642411642412334693Vibrio cholerae O395 chromosome chromosome II, complete sequenceDNA methylase N-4/N-65e-77287
NC_012580:353273:376048376048376740693Vibrio cholerae M66-2 chromosome II, complete sequenceDNA methylase N-4/N-65e-77287
NC_009456:787322:851608851608852300693Vibrio cholerae O395 chromosome 1, complete sequencehemagglutinin associated protein5e-77287
NC_002506:370629:400356400356401048693Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehaemagglutinin associated protein5e-77287
NC_004603:370320:392721392721393386666Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehaemagglutinin associated protein2e-71268
NC_003910:486776:504750504750505442693Colwellia psychrerythraea 34H, complete genomehaemagglutinin associated protein2e-67255
NC_014253:312354:329319329319330101783Methanohalobium evestigatum Z-7303 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-29128
NC_016585:417979:435333435333436124792Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative phage site-specific DNA-methyltransferase3e-1685.1
NC_020387:796253:816956816956817669714Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase6e-1477.8
NC_012988:769981:8472298472298487131485Methylobacterium extorquens DM4, complete genomephage methyltransferase5e-1168.2
NC_010172:798923:8671778671778686431467Methylobacterium extorquens PA1, complete genomeDNA methylase N-4/N-6 domain protein6e-1167.8
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-66e-1064.3
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase2e-0962.4
NC_006582:883922:8929238929238941341212Bacillus clausii KSM-K16, complete genomeadenine-specific DNA methylase4e-0961.6
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase5e-0961.2
NC_017319:155958:163189163189163872684Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein7e-0960.8
NC_004851:157675:164527164527165210684Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein7e-0960.8
NC_012973:49208:485134851349211699Helicobacter pylori B38 chromosome, complete genometype II adenine methyltransferase8e-0960.8
NC_016026:1969766:1978706197870619800371332Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA methylase family protein9e-0960.5
NC_012032:398419:4104544104544116561203Chloroflexus sp. Y-400-fl, complete genomeDNA methylase N-4/N-6 domain protein9e-0960.5
NC_010175:398453:4104884104884116901203Chloroflexus aurantiacus J-10-fl, complete genomeDNA methylase N-4/N-6 domain protein9e-0960.5
NC_016111:2892391:289888828988882899634747Streptomyces cattleya NRRL 8057, complete genomeDNA methylase1e-0860.1
NC_009787:17344:180141801418697684Escherichia coli E24377A plasmid pETEC_35, complete sequenceDNA methylase family protein1e-0860.1
NC_002128:35000:393633936340046684Escherichia coli O157:H7 str. Sakai plasmid pO157, completehemagglutinin-associated protein1e-0860.1
NC_015063:1:166811668117325645Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceDNA methylase N-4/N-6 domain protein1e-0860.1
NC_007414:56508:619386193862621684Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-0860.1
NC_012796:4075583:408655940865594087224666Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-0859.3
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein4e-0858.5
NC_011365:1171536:120245612024561203127672Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein6e-0857.8
NC_010163:614634:629457629457630335879Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA modification methylase9e-0857.4
NC_016641:2587000:2603244260324426045091266Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein7e-0857.4
NC_006856:95830:960529605296735684Salmonella enterica subsp. enterica serovar Choleraesuis strputative site-specific DNA methyl transferase7e-0857.4
NC_014632:1112733:1138770113877011400261257Ilyobacter polytropus DSM 2926 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-0857
NC_016616:2997348:3006565300656530077311167Dechlorosoma suillum PS chromosome, complete genomeadenine specific DNA methylase Mod2e-0756.6
NC_010158:92819:108442108442109119678Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceDNA methylase2e-0756.6
NC_005815:61148:893978939790074678Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative methylase1e-0756.6
NC_004838:51013:666486664867325678Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-0756.6
NC_008118:56777:947909479095467678Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA methylase1e-0756.6
NC_003134:64672:646726467265349678Yersinia pestis CO92 plasmid pMT1, complete sequenceputative DNA methylase1e-0756.6
NC_009378:106193:130882130882131559678Yersinia pestis Pestoides F plasmid MT, complete sequenceputative methylase1e-0756.6
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0756.6
NC_008686:95326:110943110943111620678Paracoccus denitrificans PD1222 chromosome 1, complete sequenceDNA methylase N-4/N-6 domain protein3e-0755.5
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase3e-0755.5
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-0755.1
NC_015873:1119500:112830311283031129109807Megasphaera elsdenii DSM 20460, complete genomeDNA (Cytosine-5-)-methyltransferase4e-0755.1
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase5e-0754.7
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein7e-0754.3
NC_014010:1392536:1411975141197514142392265Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA methylase N-4/N-6 domain protein8e-0754.3
NC_017080:3712000:3725298372529837275532256Phycisphaera mikurensis NBRC 102666, complete genomeputative modification methylase9e-0753.9
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase8e-0753.9
NC_013971:335247:345068345068345652585Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA methylase1e-0653.1
NC_013961:3413011:342573034257303426224495Erwinia amylovora, complete genomeputative DNA adenine methylase2e-0653.1
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein2e-0652.8
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease2e-0652.8
NC_012471:141463:1552281552281563941167Streptococcus equi subsp. equi 4047, complete genomephage DNA methylase2e-0652.8
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-0652.8
NC_009706:2673906:2721831272183127230721242Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase2e-0652.8
NC_015977:2807782:2829379282937928310581680Roseburia hominis A2-183 chromosome, complete genomeadenine specific DNA methylase Mod2e-0652.8
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein2e-0652.4
NC_010162:2469915:2481320248132024831551836Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0652.4
NC_009455:1025915:1035825103582510380262202Dehalococcoides sp. BAV1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0652
NC_009633:2592000:2615672261567226169461275Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-0651.6
NC_016812:152831:1621551621551638941740Sinorhizobium fredii HH103, complete genomemodification methylase EcaI6e-0651.2
NC_009617:1897887:1913872191387219151041233Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein6e-0651.2
NC_002737:533291:5450875450875462531167Streptococcus pyogenes M1 GAS, complete genomeconserved hypothetical protein, phage associated6e-0651.2