Pre_GI: BLASTP Hits

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Query: NC_007951:2206263:2208122 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2208122, End: 2208496, Length: 375

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007973:2150962:215355921535592153933375Ralstonia metallidurans CH34 chromosome 1, complete sequenceribosomal protein S62e-55214
NC_015731:3274739:327955732795573279997441Nitrosomonas sp. Is79A3 chromosome, complete genome30S ribosomal protein S62e-44177
NC_012559:2563922:257064325706432571020378Laribacter hongkongensis HLHK9, complete genomeRpsF8e-44175
NC_004757:230541:234676234676235116441Nitrosomonas europaea ATCC 19718, complete genome30S ribosomal protein S67e-43172
NC_012214:594667:601428601428601823396Erwinia pyrifoliae Ep1/96, complete genome30S ribosomal protein S69e-38155
NC_018012:1274500:127787312778731278259387Thiocystis violascens DSM 198 chromosome, complete genome30S ribosomal protein S61e-37154
NC_013364:5083949:510790851079085108303396Escherichia coli O111:H- str. 11128, complete genome30S ribosomal protein S65e-37152
NC_012997:541648:563877563877564332456Teredinibacter turnerae T7901, complete genomeribosomal protein S61e-35147
NC_014909:86000:966419664197009369Candidatus Blochmannia vafer str. BVAF chromosome, complete genome30S ribosomal protein S65e-30129
NC_010321:2319820:234349023434902343777288Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete30S ribosomal protein S64e-1993.6
NC_014964:2301835:232550523255052325792288Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete30S ribosomal protein S64e-1993.6
NC_015519:2739347:274101727410172741304288Tepidanaerobacter sp. Re1 chromosome, complete genome30S ribosomal protein S61e-1581.6
NC_009495:3832500:387056638705663870850285Clostridium botulinum A str. ATCC 3502 chromosome, complete genome30S ribosomal protein S61e-1581.6
NC_009698:3706154:374421037442103744494285Clostridium botulinum A str. Hall chromosome, complete genome30S ribosomal protein S61e-1581.6
NC_017297:3939328:397673739767373977021285Clostridium botulinum F str. 230613 chromosome, complete genome30S ribosomal protein S62e-1581.3
NC_009699:3940984:397904139790413979325285Clostridium botulinum F str. Langeland chromosome, complete genome30S ribosomal protein S62e-1581.3
NC_010516:3903867:394192339419233942207285Clostridium botulinum B1 str. Okra, complete genomeribosomal protein S62e-1581.3
NC_011837:3814000:388096138809613881248288Clostridium kluyveri NBRC 12016, complete genome30S ribosomal protein S62e-1581.3
NC_009706:3882500:394945839494583949745288Clostridium kluyveri DSM 555 chromosome, complete genome30S ribosomal protein S62e-1581.3
NC_007530:5197854:521454352145435214833291Bacillus anthracis str. 'Ames Ancestor', complete genome30S ribosomal protein S65e-1579.7
NC_006274:5267585:528803952880395288329291Bacillus cereus E33L, complete genome30S ribosomal protein S65e-1579.7
NC_003997:5200805:521441752144175214707291Bacillus anthracis str. Ames, complete genome30S ribosomal protein S65e-1579.7
NC_005957:5203915:522480752248075225097291Bacillus thuringiensis serovar konkukian str. 97-27, complete30S ribosomal protein S65e-1579.7
NC_014335:5165211:518271851827185183008291Bacillus cereus biovar anthracis str. CI chromosome, complete30S ribosomal protein S65e-1579.7
NC_005945:5202176:521578852157885216078291Bacillus anthracis str. Sterne, complete genome30S ribosomal protein S65e-1579.7
NC_012472:5239944:525663552566355256925291Bacillus cereus 03BB102, complete genome30S ribosomal protein S65e-1579.7
NC_011658:5239509:525615552561555256445291Bacillus cereus AH187 chromosome, complete genome30S ribosomal protein S65e-1579.7
NC_017200:5325977:534261553426155342905291Bacillus thuringiensis serovar finitimus YBT-020 chromosome,30S ribosomal protein S65e-1579.7
NC_004722:5381208:539879853987985399088291Bacillus cereus ATCC 14579, complete genome30S ribosomal protein S65e-1579.7
NC_016779:5189139:521003052100305210320291Bacillus cereus F837/76 chromosome, complete genome30S ribosomal protein S65e-1579.7
NC_016771:5191937:520858252085825208872291Bacillus cereus NC7401, complete genome30S ribosomal protein S65e-1579.7
NC_012659:5200831:521444352144435214733291Bacillus anthracis str. A0248, complete genome30S ribosomal protein S65e-1579.7
NC_017191:3901914:392320639232063923493288Bacillus amyloliquefaciens XH7 chromosome, complete genome30S ribosomal protein S69e-1579
NC_017188:3900951:392151439215143921801288Bacillus amyloliquefaciens TA208 chromosome, complete genome30S ribosomal protein S69e-1579
NC_014363:8228:278882788828181294Olsenella uli DSM 7084 chromosome, complete genomeSSU ribosomal protein S6P9e-1579
NC_009437:1481064:150358115035811503955375Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeribosomal protein S62e-1477.8
NC_015949:1957185:196111919611191961409291Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome30S ribosomal protein S63e-1477
NC_020410:3868573:389425838942583894545288Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeribosomal protein S6 (BS9)6e-1476.3
NC_019842:3921424:394532739453273945614288Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,30S ribosomal protein S66e-1476.3
NC_009725:3878862:390255439025543902841288Bacillus amyloliquefaciens FZB42, complete genomeRpsF6e-1476.3
NC_014972:2089003:209870620987062099131426Desulfobulbus propionicus DSM 2032 chromosome, complete genomeribosomal protein S61e-1375.5
NC_009328:3504454:353512235351223535418297Geobacillus thermodenitrificans NG80-2 chromosome, complete genome30S ribosomal protein S66e-1372.8
NC_003888:4251867:430324243032424303532291Streptomyces coelicolor A3(2), complete genome30S ribosomal protein S67e-1372.4
NC_017059:1727095:172831917283191728897579Rhodospirillum photometricum DSM 122, complete genome30S ribosomal protein S69e-1372
NC_012918:1697860:173091017309101731314405Geobacter sp. M21 chromosome, complete genome30S ribosomal protein S62e-1271.2
NC_018750:3988196:400397440039744004264291Streptomyces venezuelae ATCC 10712, complete genomeSSU ribosomal protein S6p2e-1271.2
NC_016111:3308310:331591833159183316208291Streptomyces cattleya NRRL 8057, complete genome30S ribosomal protein S63e-1270.5
NC_021177:4041915:406115440611544061444291Streptomyces fulvissimus DSM 40593, complete genome30S ribosomal protein S63e-1270.5
NC_018145:104303:119952119952120326375Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete30S ribosomal protein S64e-1270.1
NC_013355:105500:121082121082121456375Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeribosomal protein S64e-1270.1
NC_013929:5135285:517175851717585172048291Streptomyces scabiei 87.22 chromosome, complete genome30S ribosomal protein S66e-1269.7
NC_003155:5253923:525490552549055255195291Streptomyces avermitilis MA-4680, complete genome30S ribosomal protein S65e-1269.7
NC_015690:8645500:864834286483428648626285Paenibacillus mucilaginosus KNP414 chromosome, complete genomeRpsF5e-1269.7
NC_016935:8716704:872356587235658723849285Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein RpsF5e-1269.7
NC_007168:2631535:263206926320692632365297Staphylococcus haemolyticus JCSC1435, complete genome30S ribosomal protein S61e-1168.2
NC_016947:70210:751617516175451291Mycobacterium intracellulare MOTT-02 chromosome, complete genome30S ribosomal protein S62e-1168.2
NC_004369:2968251:300207230020723002371300Corynebacterium efficiens YS-314, complete genome30S ribosomal protein S62e-1167.8
NC_009338:912894:915174915174915464291Mycobacterium gilvum PYR-GCK chromosome, complete genome30S ribosomal protein S62e-1167.4
NC_000918:35564:404134041340745333Aquifex aeolicus VF5, complete genomeribosomal protein S065e-1166.6
NC_013406:7092510:709842070984207098704285Paenibacillus sp. Y412MC10 chromosome, complete genome30S ribosomal protein S64e-1166.6
NC_006831:1112000:113270911327091133038330Ehrlichia ruminantium str. Gardel, complete genome30S ribosomal protein S64e-1166.6
NC_006832:1125000:114305511430551143384330Ehrlichia ruminantium str. Welgevonden, complete genome30S ribosomal protein S64e-1166.6
NC_005295:1146500:116445611644561164785330Ehrlichia ruminantium str. Welgevonden, complete genome30S ribosomal protein S64e-1166.6
NC_018681:9262000:926364792636479263934288Nocardia brasiliensis ATCC 700358 chromosome, complete genome30S ribosomal protein S66e-1166.2
NC_012815:1757992:175895817589581759245288Bifidobacterium animalis subsp. lactis DSM 10140, complete genome30S ribosomal protein S66e-1166.2
NC_012814:1757753:175918617591861759473288Bifidobacterium animalis subsp. lactis Bl-04, complete genome30S ribosomal protein S66e-1166.2
NC_011963:1482042:150616515061651506572408Rhodobacter sphaeroides KD131 chromosome 1, complete sequence30S ribosomal protein S68e-1165.9
NC_018720:357716:373508373508373804297Bifidobacterium asteroides PRL2011 chromosome, complete genome30S ribosomal protein S61e-1065.1
NC_015672:203139:207998207998208465468Flexistipes sinusarabici DSM 4947 chromosome, complete genome30S ribosomal protein S62e-1064.7
NC_009953:5733211:573761657376165737906291Salinispora arenicola CNS-205 chromosome, complete genome30S ribosomal protein S62e-1064.7
NC_015275:1223088:123530712353071235597291Clostridium lentocellum DSM 5427 chromosome, complete genomeribosomal protein S63e-1063.9
NC_008533:1380406:138285413828541383144291Streptococcus pneumoniae D39, complete genomeribosomal protein S63e-1063.9
NC_012466:1367099:136954713695471369837291Streptococcus pneumoniae JJA, complete genomeribosomal protein S63e-1063.9
NC_003098:1372875:137532313753231375613291Streptococcus pneumoniae R6, complete genome30S ribosomal protein S63e-1063.9
NC_012469:1403412:140586014058601406150291Streptococcus pneumoniae Taiwan19F-14, complete genomeribosomal protein S63e-1063.9
NC_011900:1451545:145768314576831457973291Streptococcus pneumoniae ATCC 700669, complete genome30S ribosomal protein S63e-1063.9
NC_012468:1453763:145621114562111456501291Streptococcus pneumoniae 70585, complete genome30S ribosomal protein S63e-1063.9
NC_007799:284058:296510296510296839330Ehrlichia chaffeensis str. Arkansas, complete genomeribosomal protein S66e-1062.8
NC_014935:1834569:184719618471961847660465Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeSSU ribosomal protein s6p7e-1062.4
NC_017219:275476:280730280730281020291Bifidobacterium longum subsp. infantis ATCC 15697, complete genome30S ribosomal protein S61e-0962
NC_014638:321382:337599337599337895297Bifidobacterium bifidum PRL2010 chromosome, complete genome30S ribosomal protein S62e-0961.2
NC_008699:4922465:494269749426974942987291Nocardioides sp. JS614, complete genomeribosomal protein S65e-0959.7
NC_013222:2795919:281463328146332814971339Robiginitalea biformata HTCC2501, complete genome30S ribosomal protein S61e-0858.5
NC_010163:171148:185787185787186074288Acholeplasma laidlawii PG-8A chromosome, complete genome30S ribosomal protein S62e-0857.8
NC_018677:111500:136458136458136799342Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completehypothetical protein3e-0857
NC_013515:1623407:163113116311311631412282Streptobacillus moniliformis DSM 12112, complete genomeribosomal protein S61e-0755.5
NC_014218:1948165:196349019634901963795306Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal protein S61e-0755.1
NC_012781:3087467:310283931028393103162324Eubacterium rectale ATCC 33656, complete genome30S ribosomal protein S62e-0754.3
NC_009718:731670:736550736550736924375Fervidobacterium nodosum Rt17-B1, complete genomeribosomal protein S62e-0754.3
NC_010981:712843:720967720967721740774Wolbachia pipientis, complete genome30s ribosomal protein s69e-0752.4
NC_015167:313506:335302335302335640339Cellulophaga lytica DSM 7489 chromosome, complete genome30S ribosomal protein S62e-0651.6
NC_006833:637964:653171653171653953783Wolbachia endosymbiont strain TRS of Brugia malayi, completeRibosomal protein S63e-0650.8
NC_014934:11341:360623606236400339Cellulophaga algicola DSM 14237 chromosome, complete genomessu ribosomal protein s6p3e-0650.4
NC_017094:828836:842289842289842666378Leptospirillum ferrooxidans C2-3, complete genome30S ribosomal protein S65e-0649.7