Pre_GI: BLASTP Hits

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Query: NC_007951:1042291:1059087 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1059087, End: 1060958, Length: 1872

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:1136732:1149951114995111518311881Acidovorax sp. JS42, complete genomeTonB-dependent receptor2e-61237
NC_011992:1038985:1052210105221010540901881Acidovorax ebreus TPSY, complete genomeTonB-dependent receptor4e-61236
NC_015422:1163752:1184048118404811858411794Alicycliphilus denitrificans K601 chromosome, complete genomeTonB-dependent receptor plug2e-56220
NC_014910:3458475:3458475345847534602681794Alicycliphilus denitrificans BC chromosome, complete genometonb-dependent receptor plug1e-55218
NC_015222:1492500:1506214150621415080671854Nitrosomonas sp. AL212 chromosome, complete genomeTonB-dependent vitamin B12 receptor4e-50199
NC_009255:1890112:1891739189173918936671929Burkholderia vietnamiensis G4 chromosome 2, complete sequenceTonB-dependent receptor2e-38161
NC_005810:3493607:3497913349791334998741962Yersinia pestis biovar Microtus str. 91001, complete genomevitamin B12/cobalamin outer membrane transporter3e-38160
NC_015682:379373:3793733793733812321860Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTonB-dependent receptor2e-36154
NC_006511:4119332:4121860412186041237041845Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvitamin B12 receptor protein3e-34147
NC_003198:3586000:3601247360124736030911845Salmonella enterica subsp. enterica serovar Typhi str. CT18,vitamin B12 receptor protein3e-34147
NC_010468:4455201:4466591446659144684351845Escherichia coli ATCC 8739, complete genomeTonB-dependent vitamin B12 receptor9e-34145
NC_010473:4256000:4261359426135942632031845Escherichia coli str. K-12 substr. DH10B, complete genomevitamin B12/cobalamin outer membrane transporter9e-34145
NC_000913:4159090:4161662416166241635061845Escherichia coli K12, complete genomevitamin B12/cobalamin outer membrane transporter9e-34145
CU928160:4248621:4252870425287042547141845Escherichia coli IAI1 chromosome, complete genomevitamin B12/cobalamin outer membrane transporter9e-34145
NC_009648:4656187:4660313466031346621691857Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomevitamin B12/cobalamin outer membrane transporter2e-29131
NC_014926:165312:1838611838611856841824Thermovibrio ammonificans HB-1 chromosome, complete genomeTonB-dependent receptor plug8e-23109
NC_010725:4035397:4053757405375740557241968Methylobacterium populi BJ001, complete genomeTonB-dependent receptor plug6e-22106
NC_010475:649177:6663436663436683131971Synechococcus sp. PCC 7002, complete genomeiron compound TonB-dependent receptor, putative4e-20100
NC_014935:1834569:1853521185352118553441824Nitratifractor saLSUginis DSM 16511 chromosome, complete genometonb-dependent receptor plug1e-1998.2
NC_005125:2107088:2119165211916521214082244Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-1894.7
NC_016027:1357659:1384946138494613870452100Gluconacetobacter xylinus NBRC 3288, complete genomeTonB-dependent ferrichrome siderophore receptor1e-1585.5
NC_007722:2172000:2187721218772121896521932Erythrobacter litoralis HTCC2594, complete genomeTonB-dependent receptor1e-1481.6
NC_014655:1835848:1851867185186718537651899Leadbetterella byssophila DSM 17132 chromosome, complete genometonb-dependent receptor4e-1377
NC_015500:2866027:2909442290944229114572016Treponema brennaborense DSM 12168 chromosome, complete genomeTonB-dependent receptor plug1e-1275.5
NC_014623:9038177:9062306906230690641981893Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTonB-dependent receptor3e-1274.3
NC_016631:2112175:2160901216090121633932493Granulicella mallensis MP5ACTX8 chromosome, complete genomeTonB-dependent receptor plug5e-1170.1
NC_006347:3082921:3087919308791930900632145Bacteroides fragilis YCH46, complete genomeTonB-dependent receptor8e-1169.3
NC_003228:3143470:3149210314921031513542145Bacteroides fragilis NCTC 9343, complete genomeputative exported TonB-dependent receptor protein8e-1169.3
NC_016776:3181706:3186704318670431888482145Bacteroides fragilis 638R, complete genomeputative exported TonB-dependent receptor protein9e-1169.3
NC_002932:440191:4439944439944463332340Chlorobium tepidum TLS, complete genomereceptor, putative1e-1068.9
NC_011296:1151346:1155651115565111576151965Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTonB-dependent receptor-related protein1e-1068.6
NC_013730:5088063:5089716508971650929073192Spirosoma linguale DSM 74, complete genomeTonB-dependent receptor plug1e-0965.1
NC_007912:909112:9325969325969345181923Saccharophagus degradans 2-40, complete genomeOuter membrane cobalamin receptor protein-like2e-0964.7
NC_008253:296500:3201213201213222982178Escherichia coli 536, complete genomeTonB dependent outer membrane siderophore receptor3e-0963.9
NC_016816:1137904:1139079113907911412532175Pantoea ananatis LMG 5342, complete genomeTonB-dependent siderophore receptor7e-0962.8
NC_013956:3273340:3296862329686232990692208Pantoea ananatis LMG 20103 chromosome, complete genomeCirA7e-0962.8
NC_013520:120214:1347501347501366181869Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor8e-0962.8
NC_015963:4500:2389923899259922094Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceTonB-dependent receptor1e-0862.4
NC_006625:1:1366613666158402175Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceouter membrane receptor FepA1e-0862
NC_018080:3448392:3473901347390134758621962Pseudomonas aeruginosa DK2 chromosome, complete genomeTonB-dependent receptor2e-0861.6
NC_018645:4945698:4966070496607049681062037Desulfobacula toluolica Tol2, complete genomeTonB-dependent receptor3e-0860.8
NC_011060:2637893:2647299264729926498092511Pelodictyon phaeoclathratiforme BU-1, complete genomeTonB-dependent receptor6e-0859.7
NC_015160:1467445:1467445146744514695082064Odoribacter splanchnicus DSM 20712 chromosome, complete genomeTonB-dependent receptor plug6e-0859.7
NC_015276:855150:8702618702618721921932Marinomonas mediterranea MMB-1 chromosome, complete genomeTonB-dependent receptor9e-0859.3
NC_011750:1094000:1111646111164611138202175Escherichia coli IAI39 chromosome, complete genomeputative outer membrane receptor for iron compound or colicin9e-0859.3
NC_007946:2155454:2173489217348921756362148Escherichia coli UTI89, complete genomeputative outer membrane receptor for iron compound or colicin8e-0859.3
CP002797:2062006:2068426206842620705732148Escherichia coli NA114, complete genomehypothetical protein8e-0859.3
NC_004431:2304280:2322324232232423244712148Escherichia coli CFT073, complete genomePutative outer membrane receptor for iron compound or colicin8e-0859.3
NC_008253:2056734:2074801207480120769482148Escherichia coli 536, complete genomeputative outer membrane receptor for iron compound or colicin8e-0859.3
NC_013520:1936209:1950535195053519525982064Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor8e-0859.3
NC_010170:4800000:4904021490402149061502130Bordetella petrii, complete genomeTonB-dependent outer membrane receptor1e-0758.9
NC_011026:1181940:1197951119795112000862136Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug1e-0758.9
NC_011071:4000620:4000620400062040034542835Stenotrophomonas maltophilia R551-3, complete genomeTonB-dependent receptor2e-0757.8
NC_009431:40917:4250742507446092103Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein3e-0757.8
NC_011026:1181940:1192050119205011943712322Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent siderophore receptor3e-0757.4
NC_005125:2269343:2269343226934322714002058Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-0757.4
NC_009052:1899954:1906515190651519093042790Shewanella baltica OS155, complete genomeTonB-dependent receptor, plug5e-0757
NC_016609:2150863:2198825219882522014552631Niastella koreensis GR20-10 chromosome, complete genomeTonB-dependent receptor4e-0757
NC_006138:3355028:3370153337015333721592007Desulfotalea psychrophila LSv54, complete genomesimilar to TonB dependent outer membrane receptor4e-0757
NC_006371:1997954:2001039200103920029881950Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical receptor5e-0756.6
NC_011296:1039749:1054056105405610562722217Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTonB-dependent receptor5e-0756.6
NC_009615:711125:7111257111257129961872Parabacteroides distasonis ATCC 8503 chromosome, complete genomeTonB-dependent outer membrane receptor protein6e-0756.6
NC_013162:769915:7736757736757758162142Capnocytophaga ochracea DSM 7271, complete genomeTonB-dependent receptor plug7e-0756.2
NC_016776:215500:2312342312342335762343Bacteroides fragilis 638R, complete genomeputative TonB-dependent outer membrane protein7e-0756.2
NC_009092:2902171:2914896291489629175262631Shewanella loihica PV-4, complete genomeTonB-dependent receptor9e-0755.8
NC_011059:1391734:1398678139867814007742097Prosthecochloris aestuarii DSM 271, complete genomeTonB-dependent receptor9e-0755.8
NC_020063:3690308:3695602369560236978002199Enterobacteriaceae bacterium strain FGI 57, complete genomeTonB-dependent siderophore receptor1e-0655.8
NC_011751:3453683:3484292348429234865712280Escherichia coli UMN026 chromosome, complete genomeFerric aerobactin receptor1e-0655.5
NC_004431:3409389:3461193346119334634722280Escherichia coli CFT073, complete genomeIutA protein1e-0655.5
NC_020829:2152000:2170365217036521724732109Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-0655.5
NC_004337:3590323:3826604382660438287992196Shigella flexneri 2a str. 301, complete genomeputative ferric siderophore receptor1e-0655.1
NC_021066:3769405:3782205378220537844662262Raoultella ornithinolytica B6, complete genomeouter membrane receptor FepA1e-0655.1
NC_012881:478042:4928714928714949942124Desulfovibrio salexigens DSM 2638, complete genomeTonB-dependent receptor2e-0655.1
NC_010465:868402:8876658876658898452181Yersinia pseudotuberculosis YPIII, complete genomeTonB-dependent siderophore receptor2e-0654.7
NC_006155:3846315:3849460384946038516402181Yersinia pseudotuberculosis IP 32953, complete genomeputative ferric siderophore receptor2e-0654.7
NC_010634:3762532:3762532376253237647122181Yersinia pseudotuberculosis PB1/+, complete genomeTonB-dependent siderophore receptor2e-0654.7
NC_009708:853063:8685148685148706942181Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeTonB-dependent siderophore receptor2e-0654.7
NC_010498:1117938:1147385114738511495312147Escherichia coli SMS-3-5, complete genome2e-0654.7
NC_008686:1592073:1608270160827016103122043Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTonB-dependent receptor, plug2e-0654.7
NC_007508:4067862:4092016409201640948592844Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTonB-dependent outer membrane receptor3e-0654.3
NC_017187:691769:7017767017767040402265Arcobacter butzleri ED-1, complete genomeiron-regulated outer membrane virulence protein3e-0654.3
NC_015580:3411802:3419109341910934214392331Novosphingobium sp. PP1Y, complete genomeTonB-dependent receptor3e-0654.3
NC_009337:320389:3288763288763313472472Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeTonB-dependent receptor, plug4e-0653.9
NC_014800:329861:3473643473643493491986Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeenterobactin receptor protein4e-0653.9
NC_014012:3356629:3361888336188833648092922Shewanella violacea DSS12, complete genomeTonB-dependent receptor4e-0653.9
NC_014541:1280835:1305871130587113085432673Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor4e-0653.5
NC_015856:1152021:1155509115550911583102802Collimonas fungivorans Ter331 chromosome, complete genomeTonB-dependent receptor7e-0653.1
NC_011747:86000:99851998511020132163Escherichia coli S88 plasmid pECOS88, complete sequenceouter membrane receptor FepA7e-0653.1
NC_015311:294283:3127053127053148372133Prevotella denticola F0289 chromosome, complete genomeTonB-dependent receptor plug domain-containing protein6e-0653.1
NC_012731:3411161:3433588343358834357622175Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane receptor FepA6e-0653.1
NC_009837:127000:1414451414451436552211Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceIutA9e-0652.8
NC_014365:3123853:3130119313011931323232205Desulfarculus baarsii DSM 2075 chromosome, complete genomeTonB-dependent receptor9e-0652.8
NC_004347:3028000:3034793303479330374472655Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor domain protein9e-0652.8
NC_016860:3995445:4014550401455040167482199Salmonella enterica subsp. enterica serovar Typhimurium strAerobactin siderophore ferric receptor protein IutA8e-0652.8
NC_004663:2246756:2251412225141222542612850Bacteroides thetaiotaomicron VPI-5482, complete genomeputative vitamin B12 receptor precursor8e-0652.8
NC_020541:2694836:2699604269960427019792376Rhodanobacter sp. 2APBS1, complete genomeouter membrane cobalamin receptor protein8e-0652.8
NC_013222:229190:2471802471802492972118Robiginitalea biformata HTCC2501, complete genomepossible tonB-dependent receptor precursor8e-0652.8
NC_008686:1592073:1612232161223216144512220Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTonB-dependent receptor, plug8e-0652.8
NC_004578:6334735:6334735633473563369542220Pseudomonas syringae pv. tomato str. DC3000, complete genomeTonB-dependent receptor1e-0552.4
NC_015311:1860666:1868997186899718714112415Prevotella denticola F0289 chromosome, complete genomeTonB-dependent receptor plug domain-containing protein1e-0552.4