Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:4563981:4565534 Pseudomonas fluorescens PfO-1, complete genome

Start: 4565534, End: 4565809, Length: 276

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:1129066:1145665114566511469781314Janthinobacterium sp. Marseille chromosome, complete genome3-oxoacyl-ACP synthase5e-27119
NC_009659:1024201:1043087104308710444031317Janthinobacterium sp. Marseille chromosome, complete genome3-oxoacyl-ACP synthase4e-25113
NC_011283:2627050:2650114265011426513881275Klebsiella pneumoniae 342 chromosome, complete genome3-oxoacyl-ACP synthase4e-24110
NC_013850:2624899:2647010264701026482841275Klebsiella variicola At-22 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 24e-24110
NC_008463:4133700:4137111413711141383791269Pseudomonas aeruginosa UCBPP-PA14, complete genome3-oxoacyl-acyl carrier protein synthase II3e-24110
NC_012731:2693091:2694673269467326959471275Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative beta-ketoacyl synthase3e-24110
NC_016845:2729654:2735187273518727364611275Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative beta-ketoacyl synthase3e-24110
NC_002516:1474000:1489815148981514910831269Pseudomonas aeruginosa PAO1, complete genome3-oxoacyl-(acyl carrier protein) synthase4e-24109
NC_009648:1956070:1958692195869219599661275Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative beta-ketoacyl synthase4e-24109
NC_015856:1271295:1274170127417012754621293Collimonas fungivorans Ter331 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase1e-23108
NC_014306:2442471:2470965247096524722361272Erwinia billingiae Eb661, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II6e-2199.4
NC_007963:3225306:3241682324168232429471266Chromohalobacter salexigens DSM 3043, complete genomebeta-ketoacyl synthase1e-2098.6
NC_008782:2568027:2596517259651725978451329Acidovorax sp. JS42, complete genomebeta-ketoacyl synthase5e-2096.3
NC_013592:1602242:1606202160620216074881287Dickeya dadantii Ech586, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 29e-2095.5
NC_009255:763157:7847617847617860531293Burkholderia vietnamiensis G4 chromosome 2, complete sequence3-oxoacyl-ACP synthase1e-1891.7
NC_011365:1103927:1122391112239111236501260Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 25e-1683.2
NC_014034:1816000:1816065181606518173271263Rhodobacter capsulatus SB1003 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II-15e-1476.6
NC_008687:45967:6604666046673081263Paracoccus denitrificans PD1222 chromosome 2, complete sequencebeta-ketoacyl synthase4e-1476.6
NC_011296:102650:1065291065291077761248Thermodesulfovibrio yellowstonii DSM 11347, complete genomebeta-ketoacyl-acyl carrier protein synthase II6e-1372.8
NC_020911:2793234:2815687281568728169461260Octadecabacter antarcticus 307, complete genome3-oxoacyl-[acyl-carrier-protein] synthase FabF7e-1372.8
NC_007907:2995889:3026666302666630279041239Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1270.5
NC_011830:4031901:4054158405415840553961239Desulfitobacterium hafniense DCB-2, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 24e-1270.1
NC_007498:1666242:1685851168585116870831233Pelobacter carbinolicus DSM 2380, complete genome3-oxoacyl-(acyl-carrier-protein) synthase II7e-1269.3
NC_002947:2157648:2159016215901621602601245Pseudomonas putida KT2440, complete genome3-oxoacyl-(acyl carrier protein) synthase2e-1167.8
NC_016584:4860360:4891903489190348931531251Desulfosporosinus orientis DSM 765 chromosome, complete genomebeta-ketoacyl-acyl-carrier-protein synthase II5e-1166.6
NC_011297:787932:8019778019778032301254Dictyoglomus thermophilum H-6-12, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II1e-1065.5
NC_003155:3652587:3692368369236836936181251Streptomyces avermitilis MA-4680, complete genome3-oxoacyl-ACP synthase II3e-1063.9
NC_007517:1792000:1803205180320518044371233Geobacter metallireducens GS-15, complete genomeBeta-ketoacyl synthase4e-1063.5
NC_015276:2171355:2191461219146121927021242Marinomonas mediterranea MMB-1 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 24e-1063.2
NC_006177:1060428:1077584107758410788251242Symbiobacterium thermophilum IAM 14863, complete genome3-oxoacyl-[acyl-carrier-protein] synthase4e-1063.2
NC_011661:961129:9728139728139740541242Dictyoglomus turgidum DSM 6724, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 26e-1062.8
NC_007484:1823751:1856719185671918579661248Nitrosococcus oceani ATCC 19707, complete genomeBeta-ketoacyl synthase6e-1062.8
NC_015681:401084:4010844010844023311248Thermodesulfatator indicus DSM 15286 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 21e-0961.6
NC_007298:2170181:2172234217223421734691236Dechloromonas aromatica RCB, complete genome3-oxoacyl-(acyl carrier protein) synthase3e-0960.5
NC_014483:1954856:1971027197102719722651239Paenibacillus polymyxa E681 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II (Beta-ketoacyl-ACP synthase II)4e-0960.1
NC_019903:2708500:2714853271485327160911239Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase II5e-0959.7
UCMB5137:3660165:3678762367876236799941233Bacillus atrophaeus UCMB-5137putative beta-ketoacyl-acyl carrier protein synthase II8e-0959.3
NC_006155:2893802:2914469291446929157101242Yersinia pseudotuberculosis IP 32953, complete genome3-oxoacyl-(acyl carrier protein) synthase1e-0858.9
NC_010634:2810815:2831481283148128327221242Yersinia pseudotuberculosis PB1/+, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 21e-0858.9
NC_014622:2114244:2130428213042821316661239Paenibacillus polymyxa SC2 chromosome, complete genome3-oxoacyl-ACP synthase3e-0857.4
NC_019978:1410041:1416922141692214181721251Halobacteroides halobius DSM 5150, complete genomebeta-ketoacyl-acyl-carrier-protein synthase II3e-0857
NC_017042:1206000:1214227121422712155011275Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, complete3-oxoacyl-(acyl carrier protein) synthase II6e-0856.2
NC_013316:1225797:1239110123911012403481239Clostridium difficile R20291, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II6e-0856.2
NC_013315:1230214:1241493124149312427311239Clostridium difficile CD196 chromosome, complete genome3-oxoacyl-ACP synthase II6e-0856.2
NC_017179:1239991:1251271125127112525091239Clostridium difficile BI1, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II6e-0856.2
NC_016632:951500:9585229585229597661245Serratia symbiotica str. 'Cinara cedri' chromosome, complete3-oxoacyl-ACP synthase5e-0856.2
NC_013517:2633574:2634995263499526362301236Sebaldella termitidis ATCC 33386, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 27e-0855.8
NC_021182:4882494:4890837489083748920781242Clostridium pasteurianum BC1, complete genomebeta-ketoacyl-acyl-carrier-protein synthase II1e-0755.5
NC_016112:2301023:2318952231895223201961245Methylomicrobium alcaliphilum chromosome, complete genome3-oxoacyl-ACP synthase1e-0755.5
NC_015499:1466794:1477701147770114789451245Thermodesulfobium narugense DSM 14796 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 22e-0755.1
NC_018664:1699618:1709370170937017106111242Clostridium acidurici 9a chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II1e-0755.1
NC_012778:1778654:1786820178682017880521233Eubacterium eligens ATCC 27750, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II2e-0754.7
NC_010730:1724443:1735173173517317364171245Sulfurihydrogenibium sp. YO3AOP1, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 22e-0754.7
NC_009617:1278000:1284743128474312859781236Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebeta-ketoacyl synthase-like protein2e-0754.7
NC_016913:83988:9199891998932841287Rickettsia rickettsii str. Brazil chromosome, complete genome3-oxoacyl-(acyl carrier protein) synthase II2e-0754.3
NC_009523:907775:9274119274119286701260Roseiflexus sp. RS-1 chromosome, complete genomebeta-ketoacyl synthase3e-0753.9
NC_006570:1405178:1422264142226414235231260Francisella tularensis subsp. tularensis Schu 4, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II3e-0753.9
NC_008245:1405000:1422070142207014233291260Francisella tularensis subsp. tularensis FSC 198, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II3e-0753.9
NC_008601:1404933:1419767141976714210261260Francisella tularensis subsp. novicida U112, complete genomebeta-ketoacyl-ACP synthase II4e-0753.5
NC_008369:1083598:1083598108359810848571260Francisella tularensis subsp. holarctica OSU18, complete genome3-oxoacyl-[acyl-carrier-protein] synthase4e-0753.5
NC_007880:1079634:1079634107963410808931260Francisella tularensis subsp. holarctica, complete genome3-oxoacyl-[acyl-carrier-protein] synthase II4e-0753.5
NC_010677:707881:7082457082457095041260Francisella tularensis subsp. mediasiatica FSC147, complete genomebeta-ketoacyl-ACP synthase II4e-0753.5
NC_016933:1481000:1498036149803614992951260Francisella tularensis TIGB03 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase KASII3e-0753.5
NC_016937:1405000:1422129142212914233881260Francisella tularensis subsp. tularensis TI0902 chromosome,3-oxoacyl-(acyl-carrier-protein) synthase KASII3e-0753.5
NC_014844:3015738:3029843302984330310811239Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 27e-0752.8
NC_011881:89705:9042790427916501224Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeBeta-ketoacyl synthase7e-0752.8
NC_012438:50845:5084550845520891245Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome3-ketoacyl-ACP synthase II8e-0752.4
NC_010336:1468760:1469118146911814703771260Francisella philomiragia subsp. philomiragia ATCC 25017, completebeta-ketoacyl-ACP synthase II8e-0752.4
NC_015275:3299923:3308309330830933095501242Clostridium lentocellum DSM 5427 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 21e-0652
NC_008599:1325155:1344799134479913460131215Campylobacter fetus subsp. fetus 82-40, complete genome3-oxoacyl-(acyl carrier protein) synthase2e-0651.6
NC_016050:1088223:1100779110077911020651287Rickettsia japonica YH, complete genome3-oxoacyl-(acyl carrier protein) synthase2e-0651.2
NC_014393:4988127:4996761499676149980051245Clostridium cellulovorans 743B chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 22e-0651.2
NC_013939:148706:1580491580491592871239Deferribacter desulfuricans SSM1, complete genome3-oxoacyl-ACP synthase II2e-0650.8
NC_012563:4101000:4110600411060041118381239Clostridium botulinum A2 str. Kyoto, complete genome3-oxoacyl-(acyl-carrier-protein) synthase II5e-0650.1
NC_009697:3809044:3818616381861638198541239Clostridium botulinum A str. ATCC 19397 chromosome, complete3-oxoacyl-ACP synthase5e-0650.1
NC_009698:3706154:3715726371572637169641239Clostridium botulinum A str. Hall chromosome, complete genome3-oxoacyl-ACP synthase5e-0650.1
NC_009699:3940984:3950560395056039517981239Clostridium botulinum F str. Langeland chromosome, complete genome3-oxoacyl-ACP synthase5e-0650.1
NC_017297:3939328:3948903394890339501411239Clostridium botulinum F str. 230613 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase II5e-0650.1
NC_009495:3832500:3842082384208238433291248Clostridium botulinum A str. ATCC 3502 chromosome, complete genome3-oxoacyl-ACP synthase4e-0650.1
NC_014802:392852:4144094144094156231215Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, complete3-oxoacyl-(acyl-carrier-protein) synthase II4e-0650.1
NC_003912:426676:4482304482304494441215Campylobacter jejuni RM1221, complete genome3-oxoacyl-(acyl carrier protein) synthase4e-0650.1
NC_011725:1182000:1194825119482511960631239Bacillus cereus B4264 chromosome, complete genome3-oxoacyl-ACP synthase8e-0649.3
NC_014964:1309845:1316852131685213180811230Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete3-oxoacyl-(acyl-carrier-protein) synthase 28e-0649.3
NC_014328:4546390:4555184455518445564221239Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] synthase9e-0648.9
NC_015958:1422319:1428671142867114299001230Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase 21e-0548.9
NC_014761:1405408:1405408140540814066431236Oceanithermus profundus DSM 14977 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) synthase ii1e-0548.9