Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4314718 Pseudomonas fluorescens PfO-1, complete genome

Start: 4314718, End: 4315572, Length: 855

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016803:2431672:246276724627672463543777Desulfovibrio desulfuricans ND132 chromosome, complete genomearogenate dehydratase3e-36152
NC_012779:3570720:358037735803773581147771Edwardsiella ictaluri 93-146, complete genomeputative ABC transporter, perplasmic amino acid binding protein3e-29128
NC_010102:1779707:179916017991601799930771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-26117
NC_010102:1829357:184027418402741841044771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-26117
NC_010102:1137247:114626611462661147036771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-25117
NC_012125:1897611:190630719063071907077771Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-25116
NC_006511:1063249:107229210722921073062771Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-25116
NC_011147:1057259:106630210663021067072771Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-25116
NC_011094:688626:689969689969690739771Salmonella enterica subsp. enterica serovar Schwarzengrund strpolar amino acid ABC transporter substrate-binding protein5e-25115
NC_018643:641360:655629655629656396768Alpha proteobacterium HIMB5 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family1e-24113
NC_014844:2158318:216206621620662162935870Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 3 extracellular solute-binding protein6e-1994.7
NC_020409:512861:522995522995523867873Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular solute-binding protein family 33e-1789
NC_015672:1921023:192553519255351926362828Flexistipes sinusarabici DSM 4947 chromosome, complete genomeABC transporter periplasmic subunit family 35e-1788.2
NC_012880:3645304:364746736474673648303837Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 35e-1685.1
NC_021175:1291707:131353213135321314398867Streptococcus oligofermentans AS 1.3089, complete genomeputative periplasmic solute-binding transport protein6e-1374.7
NC_008786:3323167:336572933657293366469741Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 39e-1374.3
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit1e-1273.9
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain1e-1273.9
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein4e-1272
NC_017218:1166844:118298111829811183829849Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein1e-1170.9
NC_010508:451184:465275465275466075801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceextracellular solute-binding protein family 32e-1169.7
NC_008542:483761:504205504205505005801Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-1169.7
NC_008060:2913671:292018429201842920984801Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-1169.7
NC_007510:409843:409843409843410643801Burkholderia sp. 383 chromosome 1, complete sequenceABC amino acid transporter, periplasmic ligand binding protein2e-1169.7
NC_008800:2695977:271113927111392711939801Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cystine transporter subunit3e-1168.9
NC_009256:458649:480091480091480891801Burkholderia vietnamiensis G4 chromosome 1, complete sequenceextracellular solute-binding protein4e-1168.6
NC_014377:1546124:154975815497581550594837Thermosediminibacter oceani DSM 16646 chromosome, complete genomeextracellular solute-binding protein family 36e-1168.2
NC_012881:3004784:303306830330683033856789Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 31e-1067.4
NC_010551:415487:429248429248430048801Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceextracellular solute-binding protein family 31e-1067.4
NC_007907:5297477:531783553178355318665831Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1065.9
NC_007604:41495:750917509175852762Synechococcus elongatus PCC 7942, complete genomeextracellular solute-binding protein, family 33e-1065.9
NC_008309:190550:214337214337215119783Haemophilus somnus 129PT, complete genomeamino acid ABC transporter, substrate-binding4e-1065.5
NC_010519:71365:909109091091692783Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein5e-1065.1
NC_016514:2950860:295757829575782958378801Enterobacter cloacae EcWSU1 chromosome, complete genomecystine-binding periplasmic protein5e-1065.1
NC_008800:1459015:146456114645611465343783Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,histidine-binding periplasmic protein6e-1065.1
NC_015224:3225000:324117632411763241958783Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,histidine-binding periplasmic protein6e-1065.1
NC_009436:2685910:270448927044892705289801Enterobacter sp. 638, complete genomecystine transporter subunit1e-0964.3
NC_015376:2010009:203450220345022035323822Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding protein1e-0964.3
NC_012121:1444633:1449993144999314514681476Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein1e-0963.5
NC_007796:31691:490514905149881831Methanospirillum hungatei JF-1, complete genomeextracellular solute-binding protein, family 33e-0962.8
NC_020063:2785652:280459928045992805426828Enterobacteriaceae bacterium strain FGI 57, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family6e-0961.6
NC_015500:900807:929530929530930366837Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, periplasmic subunit family 31e-0860.8
NC_015913:178451:194768194768195571804Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeamino acid ABC transporter, amino acid-binding protein1e-0860.5
NC_020126:5849483:5854845585484558570492205Myxococcus stipitatus DSM 14675, complete genomeglutamine ABC transporter substrate-binding protein1e-0860.5
NC_007908:1010162:101645310164531017295843Rhodoferax ferrireducens T118, complete genomeextracellular solute-binding protein, family 32e-0860.1
NC_015555:693461:693461693461694237777Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, periplasmic subunit family 32e-0859.7
NC_015379:3736500:374481737448173745542726Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative amino acid ABC transporter, periplasmic component3e-0859.3
NC_016830:3230939:324760132476013248326726Pseudomonas fluorescens F113 chromosome, complete genomeLysine-arginine-ornithine-binding periplasmic protein3e-0859.3
NC_012856:1:155151551516342828Ralstonia pickettii 12D chromosome 1, complete genomeextracellular solute-binding protein family 33e-0859.3
NC_004557:558500:576911576911577729819Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein3e-0859.3
NC_016816:1912366:194686119468611947661801Pantoea ananatis LMG 5342, complete genomeABC transporter substrate-binding protein3e-0859.3
NC_011566:4309151:4326833432683343290102178Shewanella piezotolerans WP3, complete genomeSodium:dicarboxylate symporter family/bacterial extracellular solute-binding family 3 protein3e-0859.3
NC_014841:41773:432904329044114825Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceextracellular solute-binding protein family 33e-0858.9
NC_008011:924392:939981939981940730750Lawsonia intracellularis PHE/MN1-00, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain4e-0858.9
NC_010694:2492378:249237824923782493124747Erwinia tasmaniensis, complete genomeGlutamine high-affinity transporter4e-0858.5
NC_014328:1596016:1604491160449116069712481Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transport/signal transduction system protein6e-0858.5
NC_020409:621792:638065638065638871807Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeABC transporter glutamine-binding protein glnH7e-0858.2
NC_014410:2149886:217043421704342171210777Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 37e-0858.2
NC_011894:957897:969653969653970456804Methylobacterium nodulans ORS 2060, complete genomeextracellular solute-binding protein family 38e-0857.8
NC_007929:1463295:150419615041961505026831Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlutamine-binding protein8e-0857.8
NC_016012:135500:151841151841152644804Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeamino acid ABC transporter ATP-binding protein9e-0857.8
NC_008593:37456:519445194452786843Clostridium novyi NT, complete genomeamino acid ABC transporter, substrate-binding protein1e-0757.8
NC_002163:687925:687925687925688680756Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehistidine-binding protein precursor1e-0757.4
NC_014761:1321187:133313513331351333899765Oceanithermus profundus DSM 14977 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, paat family1e-0757.4
NC_015320:743983:761388761388762212825Archaeoglobus veneficus SNP6 chromosome, complete genomeABC transporter periplasmic subunit family 31e-0757.4
NC_012792:547967:556827556827557612786Variovorax paradoxus S110 chromosome 2, complete genomeextracellular solute-binding protein family 31e-0757
NC_009480:2932108:295235329523532953201849Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative polar amino acid ABC transporter,substrate-binding protein1e-0757
NC_012691:2146473:216394421639442164723780Tolumonas auensis DSM 9187, complete genomeextracellular solute-binding protein family 31e-0757
NC_016002:2037374:207232620723262073093768Pseudogulbenkiania sp. NH8B, complete genomecationic amino acid ABC transporter periplasmic binding protein2e-0757
NC_002927:2636694:265544826554482656236789Bordetella bronchiseptica RB50, complete genomeputative amino-acid ABC transporter, periplasmic amino acid-binding protein2e-0756.6
NC_014323:245979:245979245979246788810Herbaspirillum seropedicae SmR1 chromosome, complete genomeamino acid ABC transporter/signal transduction system periplasmic binding protein2e-0756.6
NC_015276:1426000:1434519143451914362521734Marinomonas mediterranea MMB-1 chromosome, complete genomehistidine kinase3e-0756.2
NC_007494:867901:867901867901868692792Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceABC amino acid transporter, periplasmic binding protein2e-0756.2
NC_008463:1188951:119924211992421200033792Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative amino acid ABC transporter3e-0755.8
NC_002516:4321000:432560443256044326395792Pseudomonas aeruginosa PAO1, complete genomeprobable amino acid binding protein3e-0755.8
NC_011894:4013830:404243840424384043280843Methylobacterium nodulans ORS 2060, complete genomeextracellular solute-binding protein family 35e-0755.5
NC_007907:2995889:300037030003703001215846Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0755.5
NC_007796:31691:480864808648904819Methanospirillum hungatei JF-1, complete genomeextracellular solute-binding protein, family 34e-0755.5
NC_007622:2399347:242361524236152424394780Staphylococcus aureus RF122, complete genomeextracellular amino acid binding ABC transporter4e-0755.5
NC_011830:4031901:403190140319014032746846Desulfitobacterium hafniense DCB-2, complete genomeextracellular solute-binding protein family 34e-0755.5
NC_008786:3845988:384832538483253849149825Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 34e-0755.5
NC_017047:3793000:380483038048303805609780Rahnella aquatilis HX2 chromosome, complete genomecationic amino acid ABC transporter periplasmic binding protein6e-0755.1
NC_015061:3725921:374016937401693740948780Rahnella sp. Y9602 chromosome, complete genomecationic amino acid ABC transporter periplasmic binding protein6e-0755.1
NC_015183:2483653:248568624856862486480795Agrobacterium sp. H13-3 chromosome, complete genomenopaline ABC transporter substrate-binding protein8e-0754.7
NC_017986:331610:333286333286334143858Pseudomonas putida ND6 chromosome, complete genomeABC transporter periplasmic protein6e-0754.7
NC_014973:3414459:341797734179773418771795Geobacter sp. M18 chromosome, complete genomefamily 3 extracellular solute-binding protein9e-0754.3
NC_012691:1743038:174678317467831747562780Tolumonas auensis DSM 9187, complete genomecationic amino acid ABC transporter, periplasmic binding protein2e-0653.5
NC_015425:34861:513965139652241846Clostridium botulinum BKT015925 chromosome, complete genomeamino acid ABC transporter substrate-binding protein2e-0653.5
NC_008541:1931266:195269519526951953588894Arthrobacter sp. FB24 chromosome 1, complete sequenceextracellular solute-binding protein2e-0653.5
NC_009049:2131017:213514021351402135865726Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-0653.5
NC_015138:272500:290144290144290968825Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 3 extracellular solute-binding protein1e-0653.5
NC_007963:3113739:312316631231663123933768Chromohalobacter salexigens DSM 3043, complete genomeextracellular solute-binding protein, family 32e-0653.1
NC_003366:728859:750652750652751488837Clostridium perfringens str. 13, complete genomeprobable amino acid ABC transporter2e-0653.1
NC_008261:676000:697962697962698798837Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein2e-0653.1
NC_013947:613774:622409622409623227819Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeextracellular solute-binding protein family 33e-0652.8
NC_004129:2609189:263173026317302632518789Pseudomonas fluorescens Pf-5, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein3e-0652.8
NC_013202:1620753:162075316207531621529777Halomicrobium mukohataei DSM 12286, complete genomeextracellular solute-binding protein family 32e-0652.8
NC_008262:654000:676152676152676988837Clostridium perfringens SM101, complete genomeamino acid ABC transporter2e-0652.8
NC_014098:2971011:297631029763102977149840Bacillus tusciae DSM 2912 chromosome, complete genomeextracellular solute-binding protein family 35e-0651.6
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein6e-0651.6
NC_016629:4081500:410174641017464102567822Desulfovibrio africanus str. Walvis Bay chromosome, completeABC transporter substrate-binding protein8e-0651.2
NC_012668:1623350:162429916242991625081783Vibrio cholerae MJ-1236 chromosome 1, complete sequenceamino acid ABC transporter substrate-binding protein8e-0651.2
NC_014165:374674:375504375504376352849Thermobispora bispora DSM 43833 chromosome, complete genomeextracellular solute-binding protein family 38e-0651.2