Pre_GI: BLASTP Hits

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Query: NC_006814:403723:440509 Lactobacillus acidophilus NCFM, complete genome

Start: 440509, End: 441330, Length: 822

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014106:419511:451723451723452532810Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIC component6e-104377
NC_015602:1339067:134521013452101346019810Lactobacillus kefiranofaciens ZW3 chromosome, complete genomePTS system, mannose-specific IIC component7e-103373
NC_015214:437733:475881475881476693813Lactobacillus acidophilus 30SC chromosome, complete genomePTS system mannose-specific transporter subunit IIC1e-102372
NC_014724:439594:476266476266477078813Lactobacillus amylovorus GRL 1112 chromosome, complete genomemannose-specific PTS system component IIC1e-102372
NC_018528:1681060:168828016882801689092813Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannose-specific transporter subunit IIC3e-102371
NC_015975:1936504:195133419513341952143810Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS family mannose/fructose/sorbose porter component IIC8e-78290
NC_005362:1870620:187723618772361878039804Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific4e-75281
NC_013504:1648551:165622716562271657030804Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific8e-75280
NC_008530:1775841:178103617810361781839804Lactobacillus gasseri ATCC 33323, complete genomemannose-specific PTS system component IIC9e-75280
NC_011660:2509362:251733925173392518145807Listeria monocytogenes HCC23 chromosome, complete genomePTS system fructose-specific transporter subunit IIC8e-70263
NC_010723:1379256:139888813988881399691804Clostridium botulinum E3 str. Alaska E43, complete genomePTS system sorbose-specific iic component2e-66252
NC_008261:967973:970158970158970961804Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIC component3e-62238
NC_013192:469771:484469484469485275807Leptotrichia buccalis DSM 1135, complete genomephosphotransferase system PTS sorbose-specific IIC subunit1e-54213
NC_017047:3212000:321334632133463214143798Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIC7e-36150
NC_016818:3148000:314928031492803150077798Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIC7e-36150
NC_015061:3147691:314874431487443149541798Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit7e-36150
NC_012880:2399205:240237424023742403171798Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit2e-35149
NC_013199:392450:411874411874412707834Lactobacillus rhamnosus Lc 705, complete genomePTS system, mannose-specific IIC component (ManY)4e-34145
NC_013192:2434664:245282124528212453636816Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit5e-34144
NC_009617:4436837:445130444513044452095792Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC5e-34144
NC_016612:2902628:292909729290972929897801Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIC1e-25116
NC_016023:875416:884578884578885378801Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose-specific transporter subunit IIC2e-1376.3
NC_011294:4604283:462807446280744628853780Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit C3e-0962.8
NC_015389:1977736:200605120060512006845795Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit8e-0961.2
NC_009792:4693152:471072147107214711470750Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0858.2
NC_004631:3841975:386302638630263863775750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein1e-0757.4
NC_003198:3855157:387753638775363878285750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein1e-0757.4
NC_013198:394000:4184674184674201551689Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IICD component2e-0756.6
CP002185:3475991:349840534984053499184780Escherichia coli W, complete genomeN-acetylgalactosamine-specific IIC component3e-0755.8
NC_012967:3191319:321362932136293214408780Escherichia coli B str. REL606 chromosome, complete genomeN-acetylgalactosamine-specific PTS system transporter subunit IIC3e-0755.8
NC_008526:343445:3656743656743672721599Lactobacillus casei ATCC 334, complete genomeMannose-specific PTS system component IICD9e-0754.3
NC_011742:3799788:381028038102803811026747Escherichia coli S88 chromosome, complete genomephosphotransferase system enzyme IIC1e-0653.9
NC_008563:3888232:389553238955323896278747Escherichia coli APEC O1, complete genomehypothetical protein1e-0653.9
NC_007946:3855445:386274538627453863491747Escherichia coli UTI89, complete genomeputative phosphotransferase system protein1e-0653.9
NC_004337:3249791:327125932712593272038780Shigella flexneri 2a str. 301, complete genomeN-acetylgalactosameine-specific IIC component 24e-0652
NC_017328:3289853:3311322331132233127791458Shigella flexneri 2002017 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IID9e-0650.8
NC_012962:869295:882634882634883419786Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1)1e-0550.8