Pre_GI: BLASTP Hits

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Query: NC_006511:682863:684715 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 684715, End: 685209, Length: 495

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1517925:151977715197771520283507Salmonella enterica subsp. enterica serovar Paratyphi C strainecotin3e-84310
NC_011147:682897:684749684749685243495Salmonella enterica subsp. enterica serovar Paratyphi A strecotin5e-84309
NC_006905:2355290:237434923743492374837489Salmonella enterica subsp. enterica serovar Choleraesuis strecotin precursor1e-83308
NC_011083:2375061:240762724076272408133507Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ecotin2e-83307
NC_017046:2324554:235712723571272357633507Salmonella enterica subsp. enterica serovar Typhimurium str. 798Ecotin3e-83306
NC_004631:685357:687209687209687703495Salmonella enterica subsp. enterica serovar Typhi Ty2, completeecotin precursor4e-83306
NC_003198:2297837:231701023170102317504495Salmonella enterica subsp. enterica serovar Typhi str. CT18,ecotin precursor4e-83306
NC_016832:687000:687163687163687669507Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Ecotin4e-83306
NC_011149:2294500:231153023115302312036507Salmonella enterica subsp. enterica serovar Agona str. SL483,ecotin4e-83306
NC_003197:2327474:236005923600592360553495Salmonella typhimurium LT2, complete genomeecotin precursor3e-83306
NC_011274:2325840:234502323450232345517495Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91ecotin3e-83306
NC_011294:2334979:235415423541542354648495Salmonella enterica subsp. enterica serovar Enteritidis strecotin3e-83306
NC_016810:2325190:235777523577752358269495Salmonella enterica subsp. enterica serovar Typhimurium strEcotin3e-83306
NC_016856:2379027:241161224116122412106495Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Secotin3e-83306
NC_016857:2325190:235777523577752358269495Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ecotin3e-83306
NC_016860:2323017:235560223556022356096495Salmonella enterica subsp. enterica serovar Typhimurium strecotin3e-83306
NC_016863:2324293:235980423598042360298495Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ecotin3e-83306
NC_011080:2342672:236181923618192362325507Salmonella enterica subsp. enterica serovar Newport str. SL254,ecotin1e-82305
NC_011094:2348491:236582523658252366331507Salmonella enterica subsp. enterica serovar Schwarzengrund strecotin1e-82305
NC_011205:2462025:248120924812092481715507Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ecotin1e-82305
NC_016831:687549:689375689375689881507Salmonella enterica subsp. enterica serovar Gallinarum/pullorumecotin1e-82305
NC_010102:683444:685270685270685776507Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-82304
NC_010067:632683:635839635839636327489Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-77285
NC_015761:2227500:224284322428432243349507Salmonella bongori NCTC 12419, complete genomeecotin1e-74278
NC_016612:5600177:562506056250605625551492Klebsiella oxytoca KCTC 1686 chromosome, complete genomeecotin5e-63239
NC_014618:1593360:160031316003131600801489Enterobacter cloacae SCF1 chromosome, complete genomeproteinase inhibitor I11 ecotin3e-60230
NC_020064:1611820:161887716188771619386510Serratia marcescens FGI94, complete genomeserine protease inhibitor ecotin1e-50198
NC_007492:2994036:299895829989582999443486Pseudomonas fluorescens PfO-1, complete genomeecotin precursor7e-39159
NC_009439:3485000:350381535038153504291477Pseudomonas mendocina ymp, complete genomeproteinase inhibitor I11, ecotin1e-35148
NC_010804:2518695:253589425358942536391498Burkholderia multivorans ATCC 17616 chromosome 1, completeecotin4e-32137
NC_007510:2805121:282061728206172821117501Burkholderia sp. 383 chromosome 1, complete sequenceecotin precursor1e-31135
NC_008060:1945597:196514319651431965643501Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceproteinase inhibitor I11, ecotin2e-31134
NC_008542:2631138:265068426506842651184501Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceproteinase inhibitor I11, ecotin2e-31134
NC_010551:2537876:256005825600582560558501Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceproteinase inhibitor I11 ecotin5e-31133
NC_009256:2725836:274507727450772745577501Burkholderia vietnamiensis G4 chromosome 1, complete sequenceecotin3e-29127
NC_017043:376441:399861399861400280420Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeecotin7e-29126
NC_015381:3457784:350303335030333503569537Burkholderia gladioli BSR3 chromosome 1, complete sequenceEcotin precursor2e-26118
NC_016639:930982:952066952066952440375Rickettsia slovaca 13-B chromosome, complete genomeEcotin precursor3e-23107
NC_017065:930985:952048952048952443396Rickettsia slovaca str. D-CWPP chromosome, complete genomeEcotin3e-23107
NC_007940:1138324:116293911629391163232294Rickettsia bellii RML369-C, complete genomeEcotin precursor4e-22103
NC_012730:1034115:105967610596761059990315Rickettsia peacockii str. Rustic, complete genomeecotin precursor5e-22103
NC_009882:915500:939379939379939735357Rickettsia rickettsii str. 'Sheila Smith', complete genomeEcotin precursor1e-1789
NC_016908:926446:950489950489950845357Rickettsia rickettsii str. Colombia chromosome, complete genomeecotin1e-1789
NC_016909:926000:950598950598950954357Rickettsia rickettsii str. Arizona chromosome, complete genomeecotin1e-1789
NC_016911:926918:950961950961951317357Rickettsia rickettsii str. Hauke chromosome, complete genomeecotin1e-1789
NC_015866:933500:958512958512958859348Rickettsia heilongjiangensis 054 chromosome, complete genomeecotin2e-1374.7
NC_009879:860925:886353886353886610258Rickettsia canadensis str. McKiel, complete genomeEcotin precursor5e-1063.5
NC_009900:1011000:103360710336071033786180Rickettsia massiliae MTU5, complete genome1e-0962.8
NC_017042:1022112:104375510437551043907153Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeecotin2e-0961.6
NC_009881:896007:921913921913922047135Rickettsia akari str. Hartford, complete genomeEcotin precursor3e-0651.2