Pre_GI: BLASTP Hits

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Query: NC_006361:4521820:4543033 Nocardia farcinica IFM 10152, complete genome

Start: 4543033, End: 4543512, Length: 480

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016906:839406:841838841838842320483Gordonia polyisoprenivorans VH2 chromosome, complete genomeferritin Dps family protein1e-60231
NC_012704:1641684:164878916487891649316528Corynebacterium kroppenstedtii DSM 44385, complete genomeDNA protection during starvation protein5e-25113
NC_014215:349917:351099351099351626528Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Starvation-inducible DNA-binding protein8e-2199.4
NC_016947:4186150:421108342110834211586504Mycobacterium intracellulare MOTT-02 chromosome, complete genomeferritin, Dps family protein2e-2097.8
NC_006300:600516:623218623218623787570Mannheimia succiniciproducens MBEL55E, complete genomeDps protein3e-1477.4
NC_006087:885760:890065890065890547483Leifsonia xyli subsp. xyli str. CTCB07, complete genomestarvation-induced DNA-binding protein4e-1477
NC_010505:4990472:499751649975164998376861Methylobacterium radiotolerans JCM 2831, complete genomeFerritin Dps family protein3e-1374.3
NC_010505:5525461:553448555344855535339855Methylobacterium radiotolerans JCM 2831, complete genomeFerritin Dps family protein3e-1373.9
NC_017167:674511:675767675767676261495Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1ferritin Dps family protein2e-1168.2
NC_015161:758929:773755773755774384630Deinococcus proteolyticus MRP chromosome, complete genomeFerritin Dps family protein2e-1168.2
NC_013205:747502:748806748806749300495Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Ferritin Dps family protein4e-1167
NC_010634:2894631:293117529311752931678504Yersinia pseudotuberculosis PB1/+, complete genomeFerritin Dps family protein2e-1064.7
NC_003143:2804500:281999528199952820498504Yersinia pestis CO92, complete genomeDNA protection during starvation conditions2e-1064.7
NC_008149:2366500:238177923817792382282504Yersinia pestis Nepal516, complete genomeDNA-binding protein2e-1064.7
NC_004088:1851500:185167218516721852175504Yersinia pestis KIM, complete genomeDNA protection during starvation conditions2e-1064.7
NC_005810:2549680:258604925860492586552504Yersinia pestis biovar Microtus str. 91001, complete genomeDNA starvation/stationary phase protection protein Dps2e-1064.7
NC_006155:2979500:301323430132343013737504Yersinia pseudotuberculosis IP 32953, complete genomeDNA protection during starvation conditions2e-1064.7
NC_010159:1818500:183403318340331834536504Yersinia pestis Angola, complete genomeferritin family protein2e-1064.7
NC_009381:2138625:217220321722032172706504Yersinia pestis Pestoides F chromosome, complete genomeDNA starvation/stationary phase protection protein Dps2e-1064.7
NC_009708:1735903:173935417393541739857504Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeDNA starvation/stationary phase protection protein Dps2e-1064.7
NC_013421:3117639:313733131373313137834504Pectobacterium wasabiae WPP163, complete genomeFerritin Dps family protein2e-1064.7
NC_017265:1571305:157275215727521573255504Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Fe-binding and storage protein2e-1064.7
NC_017168:2941938:294193829419382942441504Yersinia pestis A1122 chromosome, complete genomeDNA starvation/stationary phase protection protein Dps2e-1064.7
NC_017160:2787637:278908427890842789587504Yersinia pestis D182038 chromosome, complete genomeDNA protection protein2e-1064.7
NC_017154:2804000:281946828194682819971504Yersinia pestis D106004 chromosome, complete genomeDNA protection protein2e-1064.7
NC_014029:2756500:277231827723182772821504Yersinia pestis Z176003 chromosome, complete genomeDNA protection protein2e-1064.7
NC_014958:3207431:322858632285863229254669Deinococcus maricopensis DSM 21211 chromosome, complete genomeferritin Dps family protein1e-0962
NC_014221:398636:400148400148400651504Truepera radiovictrix DSM 17093 chromosome, complete genomeFerritin Dps family protein2e-0962
NC_020995:3300751:331933533193353319823489Enterococcus casseliflavus EC20, complete genomeDNA protection during starvation protein 13e-0960.8
CP002797:4775780:479324547932454793748504Escherichia coli NA114, complete genomeNon-specific DNA-binding protein Dps4e-0960.5
AP010958:922937:922937922937923440504Escherichia coli O103:H2 str. 12009 DNA, complete genomeFe-binding and storage protein Dps4e-0960.5
NC_013353:922937:922937922937923440504Escherichia coli O103:H2 str. 12009, complete genomeFe-binding and storage protein Dps4e-0960.5
NC_013364:928486:928486928486928989504Escherichia coli O111:H- str. 11128, complete genomeFe-binding and storage protein Dps4e-0960.5
NC_017047:1434500:144914814491481449651504Rahnella aquatilis HX2 chromosome, complete genomeDNA starvation/stationary phase protection protein Dps4e-0960.5
NC_015061:1481500:149619614961961496699504Rahnella sp. Y9602 chromosome, complete genomeFerritin Dps family protein5e-0960.1
NC_012984:2681548:269818226981822698649468Lactobacillus plantarum JDM1, complete genomestress induced DNA binding protein1e-0858.9
NC_018720:47984:708027080271281480Bifidobacterium asteroides PRL2011 chromosome, complete genomeDNA-binding ferritin-like protein for protection from oxidative damage1e-0858.5
NC_004668:546142:569460569460569927468Enterococcus faecalis V583, complete genomeDps family protein2e-0754.7
UCMB5137:2894511:290108729010872901548462Bacillus atrophaeus UCMB-5137metalloregulation DNA-binding stress protein3e-0753.9
NC_004557:1141558:114862511486251149074450Clostridium tetani E88, complete genomegeneral stress protein 20U9e-0752.8
NC_008048:389645:405475405475405960486Sphingopyxis alaskensis RB2256, complete genomeFerritin and Dps1e-0652
NC_009959:55567:706907069071160471Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequenceFerritin Dps family protein7e-0649.7
NC_015675:4565500:456583845658384566353516Mesorhizobium opportunistum WSM2075 chromosome, complete genomeFerritin Dps family protein8e-0649.3