Pre_GI: BLASTP Hits

Some Help

Query: NC_006361:2225072:2244167 Nocardia farcinica IFM 10152, complete genome

Start: 2244167, End: 2245198, Length: 1032

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006361:3047788:3070716307071630717621047Nocardia farcinica IFM 10152, complete genomeputative transposase1e-86320
NC_014151:3611956:3645262364526236463171056Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region1e-69263
NC_014151:3611956:3631363363136336323701008Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region5e-66251
NC_014151:856354:8627978627978638041008Cellulomonas flavigena DSM 20109 chromosome, complete genomeIntegrase catalytic region1e-65250
NC_015671:1865752:1872483187248318734901008Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase catalytic subunit3e-64245
NC_015671:3470903:3484356348435634853631008Cellvibrio gilvus ATCC 13127 chromosome, complete genomeintegrase catalytic subunit3e-64245
NC_021064:816000:8267108267108277201011Propionibacterium avidum 44067, complete genomeintegrase catalytic subunit6e-60231
NC_019673:6394319:639620163962016396893693Saccharothrix espanaensis DSM 44229 complete genomeTransposase1e-58227
NC_010617:1467000:1477774147777414787811008Kocuria rhizophila DC2201, complete genomeputative transposase4e-49195
NC_012803:1552122:1558163155816315591701008Micrococcus luteus NCTC 2665, complete genometransposase1e-48194
NC_013235:4091185:409404340940434095035993Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region8e-45181
NC_010617:774914:7984987984987995081011Kocuria rhizophila DC2201, complete genomeputative transposase1e-44180
NC_010617:774914:7895457895457905551011Kocuria rhizophila DC2201, complete genomeputative transposase1e-44180
NC_016947:70210:914069140691819414Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative transposase3e-38159
NC_015514:181773:195606195606196601996Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit6e-30131
NC_015514:477935:4917984917984928051008Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit6e-30131
NC_014391:4644500:465256046525604653531972Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeIntegrase catalytic region1e-29130
NC_010399:13222:182471824719209963Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completeputative integrase4e-29129
NC_010407:3174470:318889031888903189852963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase4e-29129
NC_019673:6394319:643232664323266433324999Saccharothrix espanaensis DSM 44229 complete genomeTransposase2e-29129
NC_010407:2038499:204530220453022046264963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase1e-28127
NC_010407:3174470:317934031793403180302963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-28126
NC_010407:410918:425858425858426820963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-28126
NC_017955:3731480:3775304377530437763441041Modestobacter marinus, complete genomehypothetical protein3e-28126
NC_010407:151599:164242164242165204963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-28125
NC_010407:32960:427454274543707963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase3e-28125
NC_010399:13222:228812288123843963Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completeputative transposase3e-28125
NC_015514:181773:188131188131189048918Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase catalytic subunit2e-26120
NC_010407:3132683:315392831539283154890963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element IS1121 transposase2e-26120
NC_008538:46469:489184891849847930Arthrobacter sp. FB24 plasmid 2, complete sequenceIntegrase, catalytic region1e-24114
NC_014834:3130715:314021431402143141167954Rhodopseudomonas palustris DX-1 chromosome, complete genomeIntegrase catalytic subunit5e-24112
NC_018581:759932:771904771904772716813Gordonia sp. KTR9 chromosome, complete genomeTransposase-like protein3e-22106
NC_014215:2259290:2277795227779522787991005Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Integrase, catalytic region3e-22105
NC_009937:4392108:439582343958234396755933Azorhizobium caulinodans ORS 571, complete genomeputative insertion sequence transposase protein3e-21103
NC_009937:4350132:435470243547024355634933Azorhizobium caulinodans ORS 571, complete genometransposase3e-21103
NC_010617:774914:7878067878067888521047Kocuria rhizophila DC2201, complete genomeputative transposase4e-21102
NC_016947:70210:917919179192300510Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative transposase5e-21102
NC_011071:429204:429842429842430786945Stenotrophomonas maltophilia R551-3, complete genomeIntegrase catalytic region2e-20100
NC_010545:1781393:178694717869471787771825Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence2e-1996.7
NC_003888:5114147:5122836512283651238551020Streptomyces coelicolor A3(2), complete genomeIS1652 transposase2e-1996.7
NC_009656:3869281:3870241387024138716861446Pseudomonas aeruginosa PA7 chromosome, complete genometransposase2e-1996.7
NC_015859:1631573:164053216405321641488957Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein4e-1995.9
NC_015859:1631573:164736116473611648317957Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein4e-1995.9
NC_003888:8613848:862323086232308624186957Streptomyces coelicolor A3(2), complete genomeinsertion element transposase4e-1995.9
NC_003888:56225:773157731578271957Streptomyces coelicolor A3(2), complete genomeIS1652 transposase4e-1995.5
NC_003888:6103534:613988761398876140843957Streptomyces coelicolor A3(2), complete genometransposase4e-1995.5
NC_010407:1114408:113583311358331136795963Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative insertion element ISCmi2 transposase2e-1893.6
NC_016582:4983222:499637549963754996707333Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegrase family protein1e-1790.9
NC_015957:527777:539888539888540451564Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1790.5
NC_013169:2351475:235766823576682358624957Kytococcus sedentarius DSM 20547, complete genomeintegrase family protein4e-1789.4
NC_015422:1643000:164637916463791647326948Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase catalytic subunit5e-1789
NC_008061:2106848:213340921334092134359951Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region7e-1788.6
NC_008543:127675:135412135412136362951Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region7e-1788.6
NC_015125:1136734:1146013114601311470171005Microbacterium testaceum StLB037, complete genometransposase and inactivated derivatives8e-1788.2
NC_010515:2691000:271081027108102711760951Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region8e-1788.2
NC_008146:1748026:1788013178801317890891077Mycobacterium sp. MCS, complete genomeIntegrase, catalytic region2e-1686.7
NC_015563:3979500:399047239904723991419948Delftia sp. Cs1-4 chromosome, complete genomeintegrase catalytic subunit4e-1685.9
NC_010943:4476654:448185944818594482803945Stenotrophomonas maltophilia K279a, complete genomeputative transposase4e-1685.9
NC_008752:725189:733147733147734094948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region5e-1685.5
NC_008752:2334511:234988823498882350835948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region5e-1685.5
NC_008752:585884:593945593945594892948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region5e-1685.5
NC_008752:3684739:370578037057803706727948Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegrase, catalytic region5e-1685.5
NC_010512:951527:958183958183959133951Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceIntegrase catalytic region3e-1583.2
NC_002678:4618555:463827846382784639069792Mesorhizobium loti MAFF303099, complete genometransposase3e-1582.8
NC_017093:3777178:379027937902793791271993Actinoplanes missouriensis 431, complete genomeputative transposase3e-1582.8
NC_013169:87269:936919369194023333Kytococcus sedentarius DSM 20547, complete genome5e-1582
NC_017223:2618535:261853526185352619485951Bordetella pertussis CS chromosome, complete genometransposase1e-1480.9
NC_017223:51180:690866908670036951Bordetella pertussis CS chromosome, complete genometransposase1e-1480.9
NC_002929:3305682:331465533146553315605951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_017223:3345902:335487533548753355825951Bordetella pertussis CS chromosome, complete genometransposase2e-1377
NC_002929:52500:776357763578585951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_002929:2589202:259389925938992594849951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_002929:3305682:331032833103283311278951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_017223:3345902:335054833505483351498951Bordetella pertussis CS chromosome, complete genometransposase2e-1377
NC_017223:51180:776357763578585951Bordetella pertussis CS chromosome, complete genometransposase2e-1377
NC_002929:52500:574985749858448951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_002929:52500:690866908670036951Bordetella pertussis Tohama I, complete genometransposase2e-1377
NC_017223:51180:574985749858448951Bordetella pertussis CS chromosome, complete genometransposase2e-1377
NC_013169:1845735:185223418522341852767534Kytococcus sedentarius DSM 20547, complete genome2e-1376.6
NC_010617:1910388:192070319207031921392690Kocuria rhizophila DC2201, complete genomehypothetical protein3e-1272.8
NC_008595:1844500:185086618508661851156291Mycobacterium avium 104, complete genometransposase9e-1168.2
NC_017075:2689014:269241626924162692856441Rubrivivax gelatinosus IL144, complete genome3e-0963.2
NC_014215:2295500:230089723008972301514618Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,6e-0858.5
NC_007953:811500:823782823782824654873Burkholderia xenovorans LB400 chromosome 3, complete sequence2e-0756.6
NC_012732:1:6542654276361095Rickettsia peacockii str. Rustic plasmid pRPR, complete sequencetransposase ISRpe13e-0756.2
NC_012730:1034115:1036464103646410375581095Rickettsia peacockii str. Rustic, complete genometransposase ISRpe13e-0756.2
NC_012730:131445:1411761411761422701095Rickettsia peacockii str. Rustic, complete genometransposase ISRpe13e-0756.2
NC_012730:293634:2993862993863004801095Rickettsia peacockii str. Rustic, complete genometransposase ISRpe14e-0756.2
NC_010511:2079744:208444820844482084921474Methylobacterium sp. 4-46 chromosome, complete genome6e-0755.5
NC_007406:3354000:3358275335827533597141440Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type2e-0653.9
NC_007406:3354000:336502033650203366000981Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type2e-0653.1
NC_007406:2615916:263012026301202631100981Nitrobacter winogradskyi Nb-255, complete genomehelix-turn-helix, Fis-type2e-0653.1