Pre_GI: BLASTP Hits

Some Help

Query: NC_005139:518760:530553 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 530553, End: 531194, Length: 642

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:973738:985323985323985958636Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein1e-79295
NC_009655:1626466:163661316366131637254642Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein1e-77288
NC_010634:2252329:225742722574272258065639Yersinia pseudotuberculosis PB1/+, complete genomeribose/galactose isomerase6e-76283
NC_008150:1543635:154873315487331549371639Yersinia pestis Antiqua, complete genomeputative sugar-phosphate isomerase6e-76283
NC_003143:2258636:226373422637342264372639Yersinia pestis CO92, complete genomehypothetical protein6e-76283
NC_005810:2043730:204882920488292049467639Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-76283
NC_010465:2428620:244005424400542440692639Yersinia pseudotuberculosis YPIII, complete genomeRibose/galactose isomerase6e-76283
NC_006155:2334122:233922023392202339858639Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-76283
NC_004088:2541033:255247925524792553117639Yersinia pestis KIM, complete genomehypothetical protein6e-76283
NC_008149:1669921:167501916750191675657639Yersinia pestis Nepal516, complete genomesugar-phosphate isomerase6e-76283
NC_009381:1258396:126907312690731269711639Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-76283
NC_009708:2392640:240408724040872404725639Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-76283
NC_014029:2335021:234646723464672347105639Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-76283
NC_017265:2263347:227343722734372274075639Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative sugar-phosphate isomerase6e-76283
NC_004431:279868:289106289106289744639Escherichia coli CFT073, complete genomehypothetical protein2e-65248
NC_010001:615427:622395622395623030636Clostridium phytofermentans ISDg, complete genomeRibose/galactose isomerase3e-57221
NC_009442:1158268:117012811701281170769642Streptococcus suis 05ZYH33 chromosome, complete genomehypothetical protein2e-55215
NC_013592:1730505:175465617546561755294639Dickeya dadantii Ech586, complete genomeRibose/galactose isomerase4e-55214
NC_012917:2921932:292512129251212925759639Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRibose/galactose isomerase2e-54211
NC_013421:3117639:312485131248513125489639Pectobacterium wasabiae WPP163, complete genomeRibose/galactose isomerase3e-54211
NC_004547:1970686:198944019894401990078639Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-54209
NC_014500:3023762:303036030303603030998639Dickeya dadantii 3937 chromosome, complete genomeGalactose-6-phosphate isomerase LacB subunit1e-51202
NC_012912:1788308:181736218173621818000639Dickeya zeae Ech1591, complete genomeRibose/galactose isomerase1e-51202
NC_017154:2258228:226332622633262263736411Yersinia pestis D106004 chromosome, complete genomesugar-phosphate isomerase1e-47189