Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4387630 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4387630, End: 4388655, Length: 1026

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:4824500:4851039485103948520641026Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family0689
NC_012912:1788308:1807424180742418084611038Dickeya zeae Ech1591, complete genomeIS630 family transposase7e-147520
NC_004431:1166568:1196895119689511979321038Escherichia coli CFT073, complete genomehypothetical protein2e-141501
NC_008253:2828573:2838745283874528397821038Escherichia coli 536, complete genometransposase1e-140499
NC_013892:3745749:3769666376966637707151050Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase3e-113408
NC_013892:202778:2188632188632199121050Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase3e-113408
NC_009784:2129069:2136713213671321377441032Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-112404
NC_016602:173314:2009642009642020041041Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetransposase-like protein2e-109395
NC_005126:5188976:520954752095475210455909Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-105382
NC_009783:1665610:166792116679211668883963Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein6e-100364
NC_004431:5123325:512891951289195129590672Escherichia coli CFT073, complete genomehypothetical protein4e-90331
NC_013892:753307:755589755589756464876Xenorhabdus bovienii SS-2004 chromosome, complete genometransposase2e-89329
NC_014228:1929665:197471519747151975548834Xenorhabdus nematophila ATCC 19061, complete genomeputative transposase1e-83310
NC_012912:3853377:388705938870593887622564Dickeya zeae Ech1591, complete genome2e-71269
NC_008253:3161311:318470231847023185253552Escherichia coli 536, complete genomehypothetical protein4e-68258
NC_015713:1927297:1942263194226319433121050Simkania negevensis Z chromosome gsn.131, complete genomeputative transposase2e-62239
NC_019940:2893535:2901547290154729025721026Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-47188
NC_019940:3660754:3671411367141136724361026Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-47188
NC_008253:3161311:318421631842163184593378Escherichia coli 536, complete genomehypothetical protein8e-43174
NC_018012:1628364:1639251163925116402761026Thiocystis violascens DSM 198 chromosome, complete genometransposase2e-42173
NC_020911:4465500:4476340447634044774011062Octadecabacter antarcticus 307, complete genomeputative IS630-family transposase7e-38158
NC_020908:2571943:2589356258935625904231068Octadecabacter arcticus 238, complete genomeputative IS630 family transposase4e-36152
NC_004431:5123325:512958751295875129979393Escherichia coli CFT073, complete genomehypothetical protein2e-29129
NC_009784:1231791:124768612476861247976291Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein9e-26117
NC_015510:2398434:2420635242063524216811047Haliscomenobacter hydrossis DSM 1100 chromosome, complete genometransposase2e-21103
NC_012793:1718000:1732449173244917335161068Geobacillus sp. WCH70, complete genomeIntegrase catalytic region8e-2098.2
NC_020210:1704500:1748735174873517498021068Geobacillus sp. GHH01, complete genometransposase2e-1996.7
NC_009930:4909:3224532245333541110Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein7e-1995.1
NC_009925:6323996:6335818633581863369271110Acaryochloris marina MBIC11017, complete genomehypothetical protein7e-1995.1
NC_006155:652500:663710663710663949240Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1894.4
NC_009925:5737000:5745348574534857464451098Acaryochloris marina MBIC11017, complete genomehypothetical protein2e-1893.2
NC_020210:1275031:1342816134281613438591044Geobacillus sp. GHH01, complete genometransposase5e-1892
NC_009925:1003000:1016724101672410178331110Acaryochloris marina MBIC11017, complete genomehypothetical protein1e-1790.9
NC_013892:753307:759103759103759321219Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1789.7
NC_015957:1968587:1987924198792419889581035Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative transposase7e-1788.2
NC_010296:4384000:4401177440117744022201044Microcystis aeruginosa NIES-843, complete genometransposase9e-1684.7
NC_019892:429975:4391354391354401781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase6e-1582
NC_019892:2684793:2697235269723526982781044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase6e-1582
NC_019892:2684793:2706311270631127073541044Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase6e-1582
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family7e-1478.2
NC_017059:2957911:298154329815432982109567Rhodospirillum photometricum DSM 122, complete genomePredicted orf9e-1478.2
NC_014228:1929665:197556719755671975758192Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)1e-1274.3
NC_010102:997417:100158210015821001737156Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1273.6
NC_017059:2957911:298211329821132982604492Rhodospirillum photometricum DSM 122, complete genomehypothetical protein2e-1273.6
NC_016745:2280375:2291970229197022930011032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase3e-1273.2
NC_016745:1719800:1728949172894917299801032Oceanimonas sp. GK1 chromosome, complete genomeIS630 family transposase3e-1273.2
NC_011149:1987291:202991820299182030073156Salmonella enterica subsp. enterica serovar Agona str. SL483,transposase3e-1272.8
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative7e-1168.6
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative7e-1168.6
NC_016593:1092812:110684811068481107375528Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeintegrase6e-1168.6
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase2e-1066.6
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1066.2
NC_009348:1663870:1679917167991716809481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase4e-1065.9
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase6e-1065.5
NC_009348:3819271:3831763383176338327941032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-1065.5
NC_008095:6143738:6152404615240461535011098Myxococcus xanthus DK 1622, complete genometransposase, IS630 family7e-1065.1
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase1e-0964.3
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf3e-0963.2
NC_011206:123791:136991136991137407417Acidithiobacillus ferrooxidans ATCC 53993, complete genometransposase family protein4e-0962.8
NC_016587:523215:529247529247529681435Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencetransposase of ISAli2, IS630 family. ORFB4e-0962.4
NC_016624:112919:125635125635126213579Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence5e-0962.4
NC_008740:683081:6881926881926892201029Marinobacter aquaeolei VT8, complete genometransposase5e-0962
NC_008740:443274:4641874641874652151029Marinobacter aquaeolei VT8, complete genometransposase5e-0962
NC_008740:683081:6976986976986987261029Marinobacter aquaeolei VT8, complete genometransposase5e-0962
NC_013854:2148215:216578921657892166310522Azospirillum sp. B510, complete genometransposase1e-0861.2
NC_013854:3200912:320246232024623202983522Azospirillum sp. B510, complete genometransposase1e-0861.2
NC_015731:1381737:139996813999681400552585Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein1e-0861.2
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF2e-0860.5
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF2e-0860.5
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF2e-0860.5
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF2e-0860.5
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf2e-0860.5
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf2e-0860.5
NC_011567:139598:160719160719161237519Anoxybacillus flavithermus WK1, complete genomeTransposase2e-0860.5
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein2e-0860.5
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase2e-0860.5
NC_006510:3321426:335195033519503352333384Geobacillus kaustophilus HTA426, complete genometransposase of IS642-like element3e-0859.7
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase3e-0859.7
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase3e-0859.7
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf4e-0859.3
NC_016023:2163000:216359121635912164406816Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein1e-0757.8
NC_019977:1456366:147992614799261480465540Methanomethylovorans hollandica DSM 15978, complete genometransposase1e-0757.8
NC_007645:3343815:3354658335465833556921035Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives1e-0757.4
NC_007645:6013242:603242160324216033308888Hahella chejuensis KCTC 2396, complete genomeTransposase and inactivated derivatives3e-0756.6
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF3e-0756.6
NC_021150:3698696:370588537058853706820936Azotobacter vinelandii CA6, complete genometransposase3e-0756.2
NC_012560:3698697:370588637058863706821936Azotobacter vinelandii DJ, complete genometransposase3e-0756.2
NC_014032:2440656:245973224597322460274543Salinibacter ruber M8 chromosome, complete genometransposase4e-0756.2
NC_015942:3090275:309785330978533098248396Acidithiobacillus ferrivorans SS3 chromosome, complete genometransposase family protein9e-0754.7
NC_020210:1275031:130310113031011303619519Geobacillus sp. GHH01, complete genometransposase1e-0654.3
NC_020210:2133996:219345721934572193975519Geobacillus sp. GHH01, complete genometransposase1e-0654.3
NC_019673:2155669:2160350216035021613901041Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0653.9
NC_020210:1275031:130365813036581304146489Geobacillus sp. GHH01, complete genometransposase2e-0653.5
NC_016593:3249767:326731032673103267798489Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein2e-0653.5
NC_008639:2968000:2997534299753429985861053Chlorobium phaeobacteroides DSM 266, complete genometransposase and inactivated derivatives2e-0653.5
NC_010981:242500:293993293993294403411Wolbachia pipientis, complete genomePutative transposase (fragment)4e-0652.8
NC_009749:1699152:174476017447601745272513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_009749:221311:247913247913248425513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_009749:937412:939006939006939518513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_009749:221311:253556253556254068513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_009749:289695:301652301652302164513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_009749:77583:100415100415100927513Francisella tularensis subsp. holarctica FTA, complete genometransposase4e-0652.8
NC_016593:3249767:326675432667543267305552Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetransposase6e-0652
NC_020210:2133996:219293021929302193313384Geobacillus sp. GHH01, complete genometransposase7e-0652
NC_017030:6558624:657212065721206572671552Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein8e-0651.6