Pre_GI: BLASTP Hits

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Query: NC_004741:366822:372111 Shigella flexneri 2a str. 2457T, complete genome

Start: 372111, End: 373022, Length: 912

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a highly virulent strain that has been widely used for genetic and clinical research. Causes enteric disease. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:385552:390841390841391752912Shigella flexneri 2002017 chromosome, complete genome2-dehydropantoate 2-reductase5e-179626
NC_004337:367687:372977372977373888912Shigella flexneri 2a str. 301, complete genome2-dehydropantoate 2-reductase5e-179626
NC_008258:401786:407075407075407986912Shigella flexneri 5 str. 8401, complete genomealternative pyrimidine biosynthesis5e-179626
NC_015663:2694373:270021627002162701127912Enterobacter aerogenes KCTC 2190 chromosome, complete genome2-dehydropantoate 2-reductase1e-137488
NC_020181:2714559:274466527446652745576912Enterobacter aerogenes EA1509E, complete genome2-dehydropantoate 2-reductase5e-137487
NC_004459:1794540:180715518071551808045891Vibrio vulnificus CMCP6 chromosome I, complete sequence2-dehydropantoate 2-reductase1e-51203
NC_016745:1257397:127874312787431279633891Oceanimonas sp. GK1 chromosome, complete genome2-dehydropantoate 2-reductase3e-32139
NC_007005:4857768:487362448736244874544921Pseudomonas syringae pv. syringae B728a, complete genome2-dehydropantoate 2-reductase5e-28125
NC_004578:4940000:495796249579624958882921Pseudomonas syringae pv. tomato str. DC3000, complete genome2-dehydropantoate 2-reductase3e-27122
NC_014532:1481787:148088214808821481790909Halomonas elongata DSM 2581, complete genome2-dehydropantoate 2-reductase2e-23109
NC_011725:3928853:394648339464833947373891Bacillus cereus B4264 chromosome, complete genome2-dehydropantoate 2-reductase4e-22105
NC_004722:3886800:390443239044323905322891Bacillus cereus ATCC 14579, complete genome2-dehydropantoate 2-reductase4e-22105
NC_016771:3665773:368327736832773684161885Bacillus cereus NC7401, complete genome2-dehydropantoate 2-reductase1e-21103
NC_011772:3896635:391250839125083913398891Bacillus cereus G9842, complete genome2-dehydropantoate 2-reductase5e-21102
NC_014335:3675456:369296236929623693855894Bacillus cereus biovar anthracis str. CI chromosome, completeputative 2-dehydropantoate 2-reductase1e-20100
NC_017208:3928161:394408539440853944969885Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete2-dehydropantoate 2-reductase1e-20100
NC_005957:3746891:376439737643973765284888Bacillus thuringiensis serovar konkukian str. 97-27, complete2-dehydropantoate 2-reductase4e-2099
NC_014171:3812247:382730038273003828145846Bacillus thuringiensis BMB171 chromosome, complete genome2-dehydropantoate 2-reductase7e-2098.2
NC_006274:3805134:382264038226403823530891Bacillus cereus E33L, complete genome2-dehydropantoate 2-reductase9e-2097.8
NC_007530:3724829:374232937423293743213885Bacillus anthracis str. 'Ames Ancestor', complete genome2-dehydropantoate 2-reductase9e-2097.4
NC_005945:3725397:374289737428973743787891Bacillus anthracis str. Sterne, complete genome2-dehydropantoate 2-reductase9e-2097.4
NC_003997:3724702:374220237422023743086885Bacillus anthracis str. Ames, complete genome2-dehydropantoate 2-reductase9e-2097.4
NC_012659:3724729:374222937422293743119891Bacillus anthracis str. A0248, complete genome2-dehydropantoate 2-reductase9e-2097.4
NC_011969:3657360:367486536748653675710846Bacillus cereus Q1 chromosome, complete genome2-dehydropantoate 2-reductase5e-1995.1
NC_000868:696296:713721713721714623903Pyrococcus abyssi GE5, complete genome2-dehydropantoate 2-reductase6e-1995.1
NC_013515:1391143:140834914083491409284936Streptobacillus moniliformis DSM 12112, complete genome2-dehydropantoate 2-reductase2e-1893.2
NC_013926:183057:201015201015201872858Aciduliprofundum boonei T469 chromosome, complete genome2-dehydropantoate 2-reductase2e-1687
NC_008701:1226797:123829812382981239149852Pyrobaculum islandicum DSM 4184, complete genome2-dehydropantoate 2-reductase2e-1686.3
NC_015138:1582458:158943615894361590407972Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2-dehydropantoate 2-reductase6e-1581.6
NC_008752:1523768:1535499153549915365361038Acidovorax avenae subsp. citrulli AAC00-1, complete genome2-dehydropantoate 2-reductase8e-1581.3
NC_015185:792933:799073799073800023951Desulfurobacterium thermolithotrophum DSM 11699 chromosome,2-dehydropantoate 2-reductase1e-1377.4
NC_007907:2306561:230880123088012309718918Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1376.3
NC_011830:3369282:338327033832703384187918Desulfitobacterium hafniense DCB-2, complete genome2-dehydropantoate 2-reductase2e-1376.3
NC_011831:1336779:136164113616411362564924Chloroflexus aggregans DSM 9485, complete genome2-dehydropantoate 2-reductase1e-1274.3
NC_014935:1511835:153150415315041532412909Nitratifractor saLSUginis DSM 16511 chromosome, complete genome2-dehydropantoate 2-reductase3e-1272.8
NC_014961:741209:743358743358744290933Desulfurococcus mucosus DSM 2162 chromosome, complete genomeketopantoate reductase3e-1272.8
NC_010376:1742752:175540817554081756361954Finegoldia magna ATCC 29328, complete genomeputative 2-dehydropantoate 2-reductase3e-1272.4
NC_007907:5404608:541971154197115420658948Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-1168.2
NC_015977:2189115:220351222035122204441930Roseburia hominis A2-183 chromosome, complete genome2-dehydropantoate 2-reductase7e-1168.2
NC_017986:5467279:548018254801825481129948Pseudomonas putida ND6 chromosome, complete genome2-dehydropantoate 2-reductase9e-1167.8
NC_009512:3068495:307057130705713071518948Pseudomonas putida F1, complete genome2-dehydropantoate 2-reductase9e-1167.8
NC_008541:2119883:213055521305552131487933Arthrobacter sp. FB24 chromosome 1, complete sequence2-dehydropantoate 2-reductase1e-1067.4
NC_011365:1865687:189422218942221895142921Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome2-dehydropantoate 2-reductase1e-1067
NC_015416:1645419:165055216505521651541990Methanosaeta concilii GP-6 chromosome, complete genome2-dehydropantoate 2-reductase2e-1067
NC_009523:5438000:545859354585935459591999Roseiflexus sp. RS-1 chromosome, complete genome2-dehydropantoate 2-reductase3e-1066.2
NC_012968:63898:655496554966478930Methylotenera mobilis JLW8, complete genome2-dehydropantoate 2-reductase2e-0963.2
NC_017167:3013947:301394730139473014882936Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-12-dehydropantoate 2-reductase5e-0962
NC_010610:861194:874609874609875574966Lactobacillus fermentum IFO 3956, complete genome2-dehydropantoate 2-reductase8e-0961.2
NC_013205:2922343:292269429226942923629936Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,2-dehydropantoate 2-reductase5e-0858.5
NC_010125:1011430:102429010242901025183894Gluconacetobacter diazotrophicus PAl 5, complete genome2-dehydropantoate 2-reductase1e-0757.8
CP002207:2169277:2182768218276821837961029Bacillus atrophaeus 1942, complete genome2-dehydropantoate 2-reductase9e-0857.8
NC_014639:2169277:2182768218276821837961029Bacillus atrophaeus 1942 chromosome, complete genome2-dehydropantoate 2-reductase9e-0857.8
NC_014328:2203437:221492222149222215839918Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2-dehydropantoate 2-reductase2e-0757
UCMB5137:2128500:2146072214607221471001029Bacillus atrophaeus UCMB-51372-dehydropantoate 2-reductase2e-0757
NC_009328:2808897:2815431281543128164621032Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-dehydropantoate 2-reductase3e-0756.2
NC_007777:2186000:219492921949292195882954Frankia sp. CcI3, complete genome2-dehydropantoate 2-reductase4e-0755.5
NC_007974:785216:8040738040738050801008Ralstonia metallidurans CH34 chromosome 2, complete sequence2-dehydropantoate 2-reductase1e-0654.3
NC_014364:4416467:443021844302184431138921Spirochaeta smaragdinae DSM 11293 chromosome, complete genome2-dehydropantoate 2-reductase6e-0652