Pre_GI: BLASTP Hits

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Query: NC_004578:4940000:4957962 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4957962, End: 4958882, Length: 921

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:4857768:487362448736244874544921Pseudomonas syringae pv. syringae B728a, complete genome2-dehydropantoate 2-reductase5e-143507
NC_004459:1794540:180715518071551808045891Vibrio vulnificus CMCP6 chromosome I, complete sequence2-dehydropantoate 2-reductase5e-37155
NC_016745:1257397:127874312787431279633891Oceanimonas sp. GK1 chromosome, complete genome2-dehydropantoate 2-reductase3e-34145
NC_015663:2694373:270021627002162701127912Enterobacter aerogenes KCTC 2190 chromosome, complete genome2-dehydropantoate 2-reductase2e-29130
NC_020181:2714559:274466527446652745576912Enterobacter aerogenes EA1509E, complete genome2-dehydropantoate 2-reductase2e-29129
NC_008258:401786:407075407075407986912Shigella flexneri 5 str. 8401, complete genomealternative pyrimidine biosynthesis6e-27121
NC_004741:366822:372111372111373022912Shigella flexneri 2a str. 2457T, complete genome2-dehydropantoate 2-reductase6e-27121
NC_004337:367687:372977372977373888912Shigella flexneri 2a str. 301, complete genome2-dehydropantoate 2-reductase6e-27121
NC_017328:385552:390841390841391752912Shigella flexneri 2002017 chromosome, complete genome2-dehydropantoate 2-reductase6e-27121
NC_014532:1481787:148088214808821481790909Halomonas elongata DSM 2581, complete genome2-dehydropantoate 2-reductase2e-1996.7
NC_000868:696296:713721713721714623903Pyrococcus abyssi GE5, complete genome2-dehydropantoate 2-reductase9e-1891.3
NC_013926:183057:201015201015201872858Aciduliprofundum boonei T469 chromosome, complete genome2-dehydropantoate 2-reductase1e-1790.5
NC_011831:1336779:136164113616411362564924Chloroflexus aggregans DSM 9485, complete genome2-dehydropantoate 2-reductase1e-1273.9
NC_018012:4184500:4186435418643541874421008Thiocystis violascens DSM 198 chromosome, complete genomeketopantoate reductase3e-1169.7
NC_015138:1582458:158943615894361590407972Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2-dehydropantoate 2-reductase3e-1169.7
NC_008752:1523768:1535499153549915365361038Acidovorax avenae subsp. citrulli AAC00-1, complete genome2-dehydropantoate 2-reductase5e-1168.9
NC_005957:3746891:376439737643973765284888Bacillus thuringiensis serovar konkukian str. 97-27, complete2-dehydropantoate 2-reductase5e-1168.6
NC_005945:3725397:374289737428973743787891Bacillus anthracis str. Sterne, complete genome2-dehydropantoate 2-reductase8e-1168.2
NC_012659:3724729:374222937422293743119891Bacillus anthracis str. A0248, complete genome2-dehydropantoate 2-reductase8e-1168.2
NC_006274:3805134:382264038226403823530891Bacillus cereus E33L, complete genome2-dehydropantoate 2-reductase8e-1168.2
NC_014335:3675456:369296236929623693855894Bacillus cereus biovar anthracis str. CI chromosome, completeputative 2-dehydropantoate 2-reductase7e-1168.2
NC_007530:3724829:374232937423293743213885Bacillus anthracis str. 'Ames Ancestor', complete genome2-dehydropantoate 2-reductase7e-1168.2
NC_003997:3724702:374220237422023743086885Bacillus anthracis str. Ames, complete genome2-dehydropantoate 2-reductase7e-1168.2
NC_017208:3928161:394408539440853944969885Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete2-dehydropantoate 2-reductase1e-1067.4
NC_011772:3896635:391250839125083913398891Bacillus cereus G9842, complete genome2-dehydropantoate 2-reductase3e-1066.2
NC_013205:2922343:292269429226942923629936Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,2-dehydropantoate 2-reductase3e-1065.9
NC_016771:3665773:368327736832773684161885Bacillus cereus NC7401, complete genome2-dehydropantoate 2-reductase5e-1065.5
NC_007907:5404608:541971154197115420658948Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1065.1
NC_008701:1226797:123829812382981239149852Pyrobaculum islandicum DSM 4184, complete genome2-dehydropantoate 2-reductase6e-1065.1
NC_013515:1391143:140834914083491409284936Streptobacillus moniliformis DSM 12112, complete genome2-dehydropantoate 2-reductase7e-1064.7
NC_014961:741209:743358743358744290933Desulfurococcus mucosus DSM 2162 chromosome, complete genomeketopantoate reductase1e-0964.3
NC_011725:3928853:394648339464833947373891Bacillus cereus B4264 chromosome, complete genome2-dehydropantoate 2-reductase1e-0964.3
NC_004722:3886800:390443239044323905322891Bacillus cereus ATCC 14579, complete genome2-dehydropantoate 2-reductase1e-0963.9
NC_015185:792933:799073799073800023951Desulfurobacterium thermolithotrophum DSM 11699 chromosome,2-dehydropantoate 2-reductase3e-0963.2
NC_015416:1645419:165055216505521651541990Methanosaeta concilii GP-6 chromosome, complete genome2-dehydropantoate 2-reductase1e-0860.5
NC_007907:2306561:230880123088012309718918Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0859.3
NC_011830:3369282:338327033832703384187918Desulfitobacterium hafniense DCB-2, complete genome2-dehydropantoate 2-reductase3e-0859.3
NC_014365:2359760:2380555238055523815831029Desulfarculus baarsii DSM 2075 chromosome, complete genome2-dehydropantoate 2-reductase3e-0756.2
NC_017167:3013947:301394730139473014882936Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-12-dehydropantoate 2-reductase5e-0755.5
NC_016633:1353458:1372951137295113739701020Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome2-dehydropantoate 2-reductase4e-0755.5
NC_017986:5467279:548018254801825481129948Pseudomonas putida ND6 chromosome, complete genome2-dehydropantoate 2-reductase2e-0653.5
NC_009512:3068495:307057130705713071518948Pseudomonas putida F1, complete genome2-dehydropantoate 2-reductase2e-0653.5
NC_012968:63898:655496554966478930Methylotenera mobilis JLW8, complete genome2-dehydropantoate 2-reductase3e-0653.1
NC_008541:2119883:213055521305552131487933Arthrobacter sp. FB24 chromosome 1, complete sequence2-dehydropantoate 2-reductase6e-0651.6