Pre_GI: BLASTP Hits

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Query: NC_004347:2668000:2687482 Shewanella oneidensis MR-1, complete genome

Start: 2687482, End: 2687558, Length: 77

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:2569315:25838682583868258394477Shewanella sp. MR-4, complete genometRNA-Asp9e-0752.4
NC_009901:2915939:29297772929777292985377Shewanella pealeana ATCC 700345, complete genometRNA-Asp9e-0752.4
NC_008322:2637646:26520762652076265215277Shewanella sp. MR-7, complete genometRNA-Asp9e-0752.4
NC_008321:2569315:25837342583734258381077Shewanella sp. MR-4, complete genometRNA-Asp9e-0752.4
NC_008322:2637646:26522102652210265228677Shewanella sp. MR-7, complete genometRNA-Asp9e-0752.4
NC_009901:2915939:29294292929429292950577Shewanella pealeana ATCC 700345, complete genometRNA-Asp9e-0752.4
NC_008577:2818546:28422262842226284230277Shewanella sp. ANA-3 chromosome 1, complete sequencetRNA-Asp9e-0752.4
NC_009901:2915939:29299372929937293001377Shewanella pealeana ATCC 700345, complete genometRNA-Asp9e-0752.4
NC_009901:2915939:29296032929603292967977Shewanella pealeana ATCC 700345, complete genometRNA-Asp9e-0752.4
NC_008577:2818546:28420932842093284216977Shewanella sp. ANA-3 chromosome 1, complete sequencetRNA-Asp9e-0752.4
NC_004347:2668000:26876162687616268769277Shewanella oneidensis MR-1, complete genometRNA-Asp9e-0752.4
NC_008577:44184:55972559725604877Shewanella sp. ANA-3 chromosome 1, complete sequencetRNA-Asp9e-0752.4
NC_011184:2421687:24312392431239243131577Vibrio fischeri MJ11 chromosome I, complete sequencetRNA-Asp3e-0650.8
NC_011184:325797:34668634668634676277Vibrio fischeri MJ11 chromosome I, complete sequencetRNA-Asp3e-0650.8
NC_007298:1418500:14378791437879143795577Dechloromonas aromatica RCB, complete genometRNA-Asp3e-0650.8
NC_014117:2684631:27004432700443270051977Burkholderia sp. CCGE1002 chromosome chromosome 1, completetRNA-Asp3e-0650.8
NC_011184:2723000:27287412728741272881777Vibrio fischeri MJ11 chromosome I, complete sequencetRNA-Asp3e-0650.8
NC_009524:1796000:17962891796289179636577Psychrobacter sp. PRwf-1 chromosome, complete genometRNA-Asp3e-0650.8
NC_007484:1975322:19971331997133199720977Nitrosococcus oceani ATCC 19707, complete genometRNA-Asp3e-0650.8
NC_014722:1191380:12058371205837120591377Burkholderia rhizoxinica HKI 454, complete genometRNA-Asp3e-0650.8
NC_006371:1997954:20066122006612200668877Photobacterium profundum SS9 chromosome 2, complete sequencetRNA-Asp3e-0650.8
NC_011184:597496:61043661043661051277Vibrio fischeri MJ11 chromosome I, complete sequencetRNA-Asp3e-0650.8
NC_006370:768745:78553778553778561377Photobacterium profundum SS9 chromosome 1, complete sequencetRNA-Asp3e-0650.8
NC_008344:669498:66994266994267001877Nitrosomonas eutropha C91, complete genometRNA-Asp3e-0650.8
NC_007298:1418500:14382581438258143833477Dechloromonas aromatica RCB, complete genometRNA-Asp3e-0650.8
NC_011184:2369662:23784592378459237853577Vibrio fischeri MJ11 chromosome I, complete sequencetRNA-Asp3e-0650.8
NC_007947:1229807:12359871235987123606377Methylobacillus flagellatus KT, complete genometRNA-Asp4e-0650.1
NC_007645:2204066:22157182215718221579477Hahella chejuensis KCTC 2396, complete genometRNA-Asp4e-0650.1
NC_002950:1511955:15200591520059152013577Porphyromonas gingivalis W83, complete genometRNA-Asp8e-0649.3
NC_016610:3297080:33141193314119331419577Tannerella forsythia ATCC 43037 chromosome, complete genometRNA-Asp8e-0649.3
NC_016902:3863932:38824283882428388250477Escherichia coli KO11FL chromosome, complete genometRNA-Asp1e-0548.9
NC_016902:3863932:38742043874204387428077Escherichia coli KO11FL chromosome, complete genometRNA-Asp1e-0548.9
NC_016822:246715:24961924961924969577Shigella sonnei 53G, complete genometRNA-Asp1e-0548.9
CP002185:234719:23762323762323769977Escherichia coli W, complete genometRNA-Asp1e-0548.9
CP002516:3863932:38742043874204387428077Escherichia coli KO11, complete genometRNA-Asp1e-0548.9
NC_009648:4656187:46685724668572466864877Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometRNA-Asp1e-0548.9
CP002516:3863932:38824283882428388250477Escherichia coli KO11, complete genometRNA-Asp1e-0548.9
NC_005810:3493607:35064033506403350647977Yersinia pestis biovar Microtus str. 91001, complete genometRNA-Asp1e-0548.9