Pre_GI Gene

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Host: NC_011184 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011184:325797 Vibrio fischeri MJ11 chromosome I, complete sequence

Host Lineage: Aliivibrio fischeri; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from a pinecone fish, Monocentris japonica, light-emitting organs in Japan. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This organism is found in marine environments and was originally named by Bernard Fischer during a sea voyage in the 1800s. It is a symbiont in fish and squids and is responsible for light generation in those organisms, which use it as a defense mechanism to avoid predators.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3257973270561260permeaseQuickGO ontologyBLASTP
327053327739687ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
327776328432657hypothetical protein
328838329389552hypothetical proteinBLASTP
329597329812216hypothetical proteinBLASTP
329866330444579peptide-methionine S-S-oxide reductaseQuickGO ontologyBLASTP
3305593322801722outer membrane proteinQuickGO ontologyBLASTP
3322923360773786hypothetical proteinBLASTP
33822633830176tRNA-GluQuickGO ontology
338576341448287323S ribosomal RNAQuickGO ontologyBLASTP
34307734315377tRNA-IleQuickGO ontologyBLASTP
34319034326576tRNA-AlaQuickGO ontologyBLASTP
3465273466421165S ribosomal RNAQuickGO ontologyBLASTP
34668634676277tRNA-AspQuickGO ontologyBLASTP
3473403485391200NhaP-type NaH and KH antiporterQuickGO ontologyBLASTP
348505348624120hypothetical protein