Pre_GI: BLASTP Hits

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Query: NC_003911:1078949:1108042 Silicibacter pomeroyi DSS-3, complete genome

Start: 1108042, End: 1109040, Length: 999

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013222:1659619:168204516820451683022978Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein4e-40165
NC_013222:1659619:168700316870031687992990Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein3e-35149
NC_007511:3371319:3372433337243333734791047Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-27124
NC_010172:31264:3612336123372231101Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type9e-27121
NC_011757:1288637:1298341129834112994411101Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family1e-26120
NC_008027:2648560:2664870266487026658741005Pseudomonas entomophila L48, complete genomeDNA-binding protein, AraC family6e-26118
NC_011001:163813:1853691853691864151047Burkholderia cenocepacia J2315 chromosome 2, complete sequenceAraC family regulatory protein7e-25114
NC_014310:1822751:1837637183763718386561020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceAraC family transcriptional regulator2e-22106
NC_003296:673790:7245307245307255491020Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN3e-22106
NC_015563:5289875:5289875528987552908821008Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator9e-22104
NC_008740:2905990:2905990290599029070031014Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type9e-22104
NC_020064:521500:5491445491445502021059Serratia marcescens FGI94, complete genomeDNA-binding domain-containing protein, AraC-type8e-22104
NC_004578:5916711:594281359428135943805993Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, AraC family2e-21103
NC_015690:1967244:2015425201542520164621038Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-20100
NC_015723:1047418:1058612105861210596371026Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator2e-20100
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator7e-2098.2
NC_012560:2348202:2371675237167523727211047Azotobacter vinelandii DJ, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1996.7
NC_021150:2348214:2371687237168723727331047Azotobacter vinelandii CA6, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1996.7
NC_013037:6344532:6368914636891463699511038Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family1e-1894
NC_010511:6067000:6076192607619260772861095Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator1e-1894
NC_010506:3585533:3602734360273436038131080Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family2e-1893.2
NC_002678:5060670:5060670506067050617341065Mesorhizobium loti MAFF303099, complete genomehypothetical protein3e-1892.8
NC_008061:2193000:2207475220747522085691095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family4e-1892.4
NC_015136:1101725:1127466112746611284941029Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator6e-1891.7
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein7e-1891.7
NC_007492:3180480:318583231858323186830999Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family9e-1891.3
NC_009656:5505413:5527239552723955283091071Pseudomonas aeruginosa PA7 chromosome, complete genomeAraC family transcriptional regulator6e-1788.6
NC_015381:1705383:1712147171214717131481002Burkholderia gladioli BSR3 chromosome 1, complete sequenceTranscriptional regulator, AraC family protein8e-1788.2
NC_011894:2359128:2371528237152823726161089Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1687
NC_010172:31264:5004950049511311083Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type3e-1685.9
NC_010501:4989455:4998963499896350000001038Pseudomonas putida W619, complete genometranscriptional regulator, AraC family4e-1685.9
NC_013592:1602242:1616182161618216171921011Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family6e-1685.1
NC_016609:3835656:384093838409383841936999Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator8e-1684.7
NC_020829:4429435:4441701444170144427711071Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator1e-1584.3
NC_012721:109500:1096671096671106921026Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein3e-1582.8
NC_008463:4342119:4364836436483643658371002Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator4e-1582.4
NC_009439:101174:121557121557122549993Pseudomonas mendocina ymp, complete genomeAraC family transcriptional regulator5e-1582
NC_014259:2948335:2949247294924729503171071Acinetobacter sp. DR1 chromosome, complete genomeAraC family transcriptional regulator5e-1582
NC_008390:2448379:2449503244950324505401038Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, AraC family9e-1581.3
NC_011770:4542183:4564793456479345657941002Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator1e-1480.9
NC_008314:1825223:1825223182522318262451023Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, AraC-family1e-1480.5
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator3e-1479.7
NC_010162:8873051:888440788844078885000594Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator6e-1478.6
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family6e-1478.6
NC_010623:1961685:2021028202102820220441017Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-1478.2
NC_020829:1840281:1842091184209118431221032Pseudomonas denitrificans ATCC 13867, complete genomeputative regulator7e-1478.2
NC_014364:3633291:364876036487603649443684Spirochaeta smaragdinae DSM 11293 chromosome, complete genome3e-1376.6
NC_020829:4429435:4442768444276844438141047Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator3e-1376.3
NC_003911:4001094:4017291401729140183221032Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family3e-1376.3
NC_010557:316000:3182723182723192881017Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family4e-1375.9
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family4e-1375.9
NC_009075:92210:1022481022481032521005Burkholderia pseudomallei 668 chromosome II, complete sequenceputative transcriptional regulator5e-1375.5
NC_002516:2306776:2306776230677623078101035Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator5e-1375.5
NC_015723:1448000:1459268145926814602901023Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator5e-1375.5
NC_013446:2623528:2624404262440426254981095Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family7e-1375.1
NC_012660:3179980:3185843318584331868591017Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein7e-1375.1
NC_006351:73000:8293882938839571020Burkholderia pseudomallei K96243 chromosome 2, complete sequenceregulatory protein6e-1375.1
NC_015376:3320818:3331605333160533326571053Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AraC family protein2e-1273.9
NC_007492:3180480:3186837318683731878891053Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family2e-1273.9
NC_015663:3742738:3760268376026837612751008Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator2e-1273.6
NC_010506:5155951:5172420517242051735231104Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family3e-1272.8
NC_013510:4484000:4500552450055245016071056Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AraC family3e-1272.8
NC_020181:1653261:1656963165696316579701008Enterobacter aerogenes EA1509E, complete genomevirulence regulating protein4e-1272.4
NC_014323:992978:1005383100538310064171035Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein5e-1272.4
NC_015677:3787419:379209937920993793067969Ramlibacter tataouinensis TTB310 chromosome, complete genomeAraC family transcriptional regulator6e-1272
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein6e-1272
NC_012880:1585255:1593922159392215949351014Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family1e-1171.2
NC_008702:3375027:3391123339112333922561134Azoarcus sp. BH72, complete genomeputative ornithine utilization regulator1e-1170.9
NC_009075:92210:946159461595127513Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, AraC family1e-1170.9
NC_013192:1504310:1504310150431015053831074Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, AraC family1e-1170.9
NC_011894:2125474:213090421309042131221318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family1e-1170.9
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-1170.5
NC_007974:2097334:2111901211190121129471047Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-1170.5
NC_014762:2428721:2451614245161424526541041Sulfuricurvum kujiense DSM 16994 chromosome, complete genometranscriptional regulator, arac family2e-1170.5
NC_008705:3430839:3436435343643534374391005Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-1170.5
NC_009077:3376351:3381947338194733829511005Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-1170.5
NC_008146:3401743:3408153340815334091571005Mycobacterium sp. MCS, complete genometranscriptional regulator, AraC family1e-1170.5
NC_016947:2380500:2392470239247023934741005Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAraC family transcriptional regulator1e-1170.5
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator2e-1170.1
NC_011894:7702000:773128277312827731632351Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1170.1
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family2e-1170.1
NC_011770:4924127:4961086496108649621051020Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator OruR3e-1169.7
NC_008463:4743296:4744858474485847458771020Pseudomonas aeruginosa UCBPP-PA14, complete genometranscriptional regulator OruR3e-1169.7
NC_002516:891000:9057269057269067451020Pseudomonas aeruginosa PAO1, complete genometranscriptional regulator OruR3e-1169.7
NC_007651:3656433:3668226366822636692451020Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, putative5e-1168.9
NC_010623:1961685:1995143199514319961891047Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-1168.6
NC_010511:2079744:210000321000032100419417Methylobacterium sp. 4-46 chromosome, complete genome7e-1168.2
NC_016830:3869572:3944718394471839457341017Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator9e-1168.2
NC_007435:1914375:191647419164741917091618Burkholderia pseudomallei 1710b chromosome II, complete sequenceAraC family regulatory protein1e-1067.8
NC_011894:2503639:251167325116732511990318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family1e-1067.4
NC_006351:73000:752967529675802507Burkholderia pseudomallei K96243 chromosome 2, complete sequenceAraC family regulatory protein2e-1067
NC_004129:4596040:4617563461756346185851023Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family3e-1066.2
NC_009952:2752500:2765180276518027662081029Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator4e-1065.9
NC_010172:573046:5788135788135798771065Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type4e-1065.9
NC_007650:84140:9053790537915531017Burkholderia thailandensis E264 chromosome II, complete sequencehypothetical protein8e-1065.1
NC_011894:585637:613011613011613421411Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family1e-0964.3
NC_018691:2254566:2259228225922822602921065Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator3e-0963.2
NC_016887:1714664:172429617242961725198903Nocardia cyriacigeorgica GUH-2, complete genometranscriptional regulator3e-0962.8
NC_014366:1663034:1664567166456716656041038Gamma proteobacterium HdN1, complete genometranscriptional regulator, AraC family3e-0962.8
NC_010501:3671517:3693177369317736942051029Pseudomonas putida W619, complete genometranscriptional regulator, AraC family3e-0962.8
NC_009078:74954:773597735977871513Burkholderia pseudomallei 1106a chromosome II, complete sequenceAraC family regulatory protein5e-0962.4
NC_020054:4161049:419729541972954198161867Fibrella aestuarina BUZ 2 drat genometranscriptional regulator, AraC family7e-0961.6
NC_016887:3286436:3291346329134632928121467Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein8e-0961.6
NC_010511:4415731:442598544259854426191207Methylobacterium sp. 4-46 chromosome, complete genome1e-0860.8
NC_002655:301940:309101309101309844744Escherichia coli O157:H7 EDL933, complete genomeputative AraC-type regulatory protein encoded in prophage CP-933H1e-0860.8
NC_002695:301939:309100309100309843744Escherichia coli O157:H7 str. Sakai, complete genomeputative transcription regulator1e-0860.8
NC_011353:305820:312981312981313724744Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator1e-0860.8
NC_013008:306953:312980312980313723744Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeAraC family transcriptional regulator1e-0860.8
NC_011740:2769961:277659727765972777337741Escherichia fergusonii ATCC 35469, complete genomeputative araC-type regulatory protein from bacteriophage origin2e-0860.5
NC_017075:2689014:2690594269059426916161023Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator2e-0860.5
NC_010511:7553703:757677675767767577060285Methylobacterium sp. 4-46 chromosome, complete genome4e-0858.9
NC_002516:2436304:244856824485682449545978Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator5e-0858.9
NC_015761:4188250:420486842048684205743876Salmonella bongori NCTC 12419, complete genomearaC family regulatory protein7e-0858.5
NC_012792:707864:7078647078647089371074Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, AraC family8e-0858.2
NC_011294:4409137:441770244177024418577876Salmonella enterica subsp. enterica serovar Enteritidis strAraC family regulatory protein1e-0757.8
NC_009338:4869700:4887442488744248884821041Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein1e-0757.8
NC_016831:4367000:437575143757514376626876Salmonella enterica subsp. enterica serovar Gallinarum/pullorumaraC family regulatory protein1e-0757.8
NC_010102:4477836:448640344864034487278876Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0757.8
NC_011080:4543000:455131645513164552191876Salmonella enterica subsp. enterica serovar Newport str. SL254,AraC family regulatory protein1e-0757.8
NC_011083:4547825:455610545561054556980876Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,AraC family regulatory protein1e-0757.8
NC_011094:4442478:445079244507924451667876Salmonella enterica subsp. enterica serovar Schwarzengrund straraC family transcriptional regulator1e-0757.8
NC_011274:4385039:439560643956064396481876Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91AraC family regulatory protein1e-0757.8
NC_009832:1280938:1293321129332112943581038Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family2e-0757.4
NC_003198:4397074:440535344053534406228876Salmonella enterica subsp. enterica serovar Typhi str. CT18,araC family regulatory protein2e-0757
NC_004631:4381724:439000343900034390878876Salmonella enterica subsp. enterica serovar Typhi Ty2, completearaC family regulatory protein2e-0757
NC_011149:4474012:448232444823244483199876Salmonella enterica subsp. enterica serovar Agona str. SL483,AraC family regulatory protein2e-0757
NC_011147:4297513:430784143078414308716876Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator2e-0757
NC_016810:4573172:458146245814624582337876Salmonella enterica subsp. enterica serovar Typhimurium straraC family regulatory protein2e-0757
NC_016832:4368948:437722743772274378102876Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,AraC family regulatory protein2e-0757
NC_016856:4563435:457371245737124574587876Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative DNA-binding protein2e-0757
NC_016857:4573173:458146345814634582338876Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74AraC family transcription regulator2e-0757
NC_016860:4649274:465827646582764659151876Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator2e-0757
NC_016863:4513106:452131845213184522193876Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative DNA-binding protein2e-0757
NC_017046:4571833:458012345801234580998876Salmonella enterica subsp. enterica serovar Typhimurium str. 798araC family regulatory protein2e-0757
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family2e-0756.6
NC_011205:4564645:457492245749224575797876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator2e-0756.6
NC_013132:3877500:390580239058023906800999Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family4e-0755.8
NC_012125:4481808:449021544902154491090876Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator4e-0755.8
NC_006905:4486433:449484044948404495715876Salmonella enterica subsp. enterica serovar Choleraesuis strputative AraC-type DNA-binding domain-containing protein4e-0755.8
NC_009078:74954:823408234082975636Burkholderia pseudomallei 1106a chromosome II, complete sequenceregulatory protein4e-0755.8
NC_010067:3204682:322008632200863220961876Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-0755.5
NC_015138:201323:201323201323202261939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAraC family transcriptional regulator7e-0755.1
NC_016631:3245501:325872632587263259574849Granulicella mallensis MP5ACTX8 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_014623:9492000:951145895114589512228771Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeAraC family transcriptional regulator1e-0654.3
NC_011894:2747491:2753607275360727547491143Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family3e-0653.1
NC_014153:2077647:209508320950832096024942Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, AraC family3e-0653.1
NC_014206:3391352:3391352339135233929441593Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_016114:7282882:7291086729108672921051020Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator5e-0652.4
NC_015690:4469775:4555014455501445566061593Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYtdP25e-0652.4
NC_017075:3165858:3193580319358031946051026Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator7e-0652
NC_015723:280368:291558291558292412855Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator7e-0652
NC_004129:4596040:459824945982494599214966Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, putative8e-0651.6