Pre_GI: BLASTP Hits

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Query: NC_003911:1078949:1094205 Silicibacter pomeroyi DSS-3, complete genome

Start: 1094205, End: 1095173, Length: 969

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:3982383:399147739914773992475999Dickeya dadantii Ech703, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-51203
NC_012691:779826:7885707885707896011032Tolumonas auensis DSM 9187, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-30133
NC_009659:892272:9039629039629049751014Janthinobacterium sp. Marseille chromosome, complete genomeRNA-directed DNA polymerase1e-29130
NC_007347:1:687068707844975Ralstonia eutropha JMP134 chromosome 1, complete sequenceRNA-directed DNA polymerase6e-29128
NC_015496:3256372:3267584326758432686031020Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA-directed DNA polymerase1e-28127
NC_016026:2082500:2097240209724020990481809Micavibrio aeruginosavorus ARL-13 chromosome, complete genomereverse transcriptase family protein4e-28125
NC_017191:3901914:3912193391219339139561764Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA-directed DNA polymerase2e-25116
NC_017188:3900951:3910501391050139122641764Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA-directed DNA polymerase2e-25116
NC_010334:609636:620220620220621074855Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-25115
NC_020418:2868000:2883180288318028849131734Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-24114
NC_009973:178000:2176542176542194081755Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeRNA-directed DNA polymerase9e-24111
NC_015510:4674774:4680972468097246832302259Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeRNA-directed DNA polymerase3e-23109
NC_011883:2826000:2832835283283528346191785Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,RNA-directed DNA polymerase3e-23108
NC_010688:673454:6822916822916839851695Xanthomonas campestris pv. campestris, complete genomeRNA-directed DNA polymerase1e-22107
NC_012947:2898179:290244829024482903410963Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRNA-directed DNA polymerase3e-22105
NC_013440:1190832:1204684120468412063901707Haliangium ochraceum DSM 14365, complete genomeRibonuclease H3e-22105
NC_012108:2159230:217027321702732171157885Desulfobacterium autotrophicum HRM2, complete genomeRNA-directed DNA polymerase (retron-type reverse transcriptase)2e-2099.8
NC_007086:2887875:2939736293973629409231188Xanthomonas campestris pv. campestris str. 8004, complete genomeRNA-directed DNA polymerase3e-2099.4
NC_013194:634039:6422706422706439851716Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRibonuclease H6e-2098.6
NC_016818:1795576:1804158180415818059991842Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completereverse transcriptase8e-2098.2
NC_011750:4307166:4329863432986343310261164Escherichia coli IAI39 chromosome, complete genomeputative retron-type reverse transcriptase8e-2097.8
NC_016445:2012294:201979920197992020770972Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRNA-directed DNA polymerase1e-1997.1
NC_012668:1036000:104405310440531045024972Vibrio cholerae MJ-1236 chromosome 1, complete sequencereverse transcriptase1e-1997.1
NC_012582:2626786:263429426342942635265972Vibrio cholerae O395 chromosome chromosome I, complete sequenceRNA-directed DNA polymerase1e-1997.1
NC_012578:2479150:248665824866582487629972Vibrio cholerae M66-2 chromosome I, complete sequenceRNA-directed DNA polymerase1e-1997.1
NC_009457:2095366:210287421028742103845972Vibrio cholerae O395 chromosome 2, complete sequenceRNA-directed DNA polymerase1e-1997.1
NC_002505:2537655:254964225496422550613972Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRNA-directed DNA polymerase1e-1997.1
NC_016944:2588435:259596425959642596911948Vibrio cholerae IEC224 chromosome I, complete sequenceRNA-directed DNA polymerase2e-1997.1
NC_011601:4036590:406150440615044062463960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeRNA-directed DNA polymerase2e-1996.7
NC_020304:3029243:303402230340223034798777Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase3e-1996.3
NC_012660:2045398:2084638208463820857861149Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA-directed DNA polymerase4e-1995.5
NC_021066:3201500:321332732133273214196870Raoultella ornithinolytica B6, complete genomehypothetical protein8e-1994.7
NC_015164:2473496:2477601247760124790611461Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase4e-1892
NC_006513:286549:2939752939752958941920Azoarcus sp. EbN1, complete genomeprobable RNA-directed DNA polymerase6e-1891.7
NC_007645:6858465:6858465685846568597991335Hahella chejuensis KCTC 2396, complete genomeRetron-type reverse transcriptase2e-1790.1
NC_013406:303218:3125503125503142201671Paenibacillus sp. Y412MC10 chromosome, complete genomeRNA-directed DNA polymerase5e-1788.6
NC_002939:1480474:1491977149197714931191143Geobacter sulfurreducens PCA, complete genomeRNA-directed DNA polymerase1e-1687.4
NC_013456:2984491:298688029868802987845966Vibrio sp. Ex25 chromosome 1, complete genomeputative reverse transcriptase1e-1687.4
NC_010334:609636:6242056242056253471143Shewanella halifaxensis HAW-EB4, complete genomeRNA-directed DNA polymerase3e-1583.2
NC_015663:1356982:1366981136698113679971017Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRNA-directed DNA polymerase2e-1583.2
NC_011206:262844:277816277816278763948Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-1583.2
NC_008786:1298817:1309683130968313108311149Verminephrobacter eiseniae EF01-2, complete genomeRNA-directed DNA polymerase9e-1581.3
NC_012918:928903:9532789532789544111134Geobacter sp. M21 chromosome, complete genomeRNA-directed DNA polymerase3e-1479.3
NC_015635:5222000:523243052324305233401972Microlunatus phosphovorus NM-1, complete genomeputative RNA-directed DNA polymerase5e-1479
NC_008570:2216736:224228322422832243191909Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative RNA-dependent DNA polymerase1e-1377
NC_014837:33014:4546245462464751014Pantoea sp. At-9b chromosome, complete genomeRNA-directed DNA polymerase2e-1376.6
NC_015856:3059737:3068580306858030697581179Collimonas fungivorans Ter331 chromosome, complete genomeretron reverse transcriptase1e-1274.3
NC_017075:1674758:169370016937001694443744Rubrivivax gelatinosus IL144, complete genomeputative RNA-directed DNA polymerase9e-1271.2
NC_018012:1789028:180004918000491801002954Thiocystis violascens DSM 198 chromosome, complete genomeRetron-type reverse transcriptase2e-1170.1
NC_004578:4432983:4443121444312144443021182Pseudomonas syringae pv. tomato str. DC3000, complete genomeretron reverse transcriptase4e-1169.3
NC_008781:1426285:143612114361211436630510Polaromonas naphthalenivorans CJ2, complete genomeretron reverse transcriptase5e-1168.9
NC_016620:781995:784689784689785654966Bacteriovorax marinus SJ, complete genomereverse transcriptase6e-1168.6
NC_015976:2900891:291120929112092912144936Sphingobium sp. SYK-6, complete genomeputative RNA-directed DNA polymerase9e-1167.8
NC_013961:73037:834488344884434987Erwinia amylovora, complete genomeputative retron reverse transcriptase1e-1067.4
NC_007606:3784847:380768838076883808197510Shigella dysenteriae Sd197, complete genomeputative RNA-directed DNA polymerase, msDNA specific2e-1066.6
NC_013959:83992:922959229593173879Sideroxydans lithotrophicus ES-1 chromosome, complete genomeputative reverse transcriptase1e-0964.3
NC_002516:776787:785969785969786925957Pseudomonas aeruginosa PAO1, complete genomehypothetical protein2e-0963.5
NC_010688:3030873:306024630602463061202957Xanthomonas campestris pv. campestris, complete genomeputative reverse transcriptase3e-0962.8
NC_018012:1274500:128271112827111283664954Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein5e-0962
NC_010338:4530403:454094645409464541869924Caulobacter sp. K31, complete genomehypothetical protein7e-0961.6
NC_007963:1370903:1378303137830313793341032Chromohalobacter salexigens DSM 3043, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)9e-0961.2
NC_012880:2778795:278747227874722788422951Dickeya dadantii Ech703, complete genomereverse transcriptase1e-0860.8
NC_013889:1514799:1529559152955915307431185Thioalkalivibrio sp. K90mix chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0858.9
NC_010501:3987615:4002391400239140035151125Pseudomonas putida W619, complete genomeRNA-directed DNA polymerase (reverse transcriptase)5e-0858.9
NC_008313:2685531:270267527026752703667993Ralstonia eutropha H16 chromosome 1, complete sequencereverse transcriptase (RNA-dependent DNA polymerase)7e-0858.5
NC_013851:3142182:314937531493753150307933Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein1e-0757.8
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-0757.4
NC_014562:983398:997923997923998909987Pantoea vagans C9-1 chromosome, complete genomehypothetical protein2e-0756.6
NC_014910:242845:2767302767302777581029Alicycliphilus denitrificans BC chromosome, complete genomeretron reverse transcriptase3e-0756.6
NC_009434:695582:7563407563407578451506Pseudomonas stutzeri A1501, complete genomeputative reverse transcriptase-maturase-transposase7e-0755.1
NC_009434:3611738:3671821367182136733261506Pseudomonas stutzeri A1501, complete genomegroup II intron-encoding maturase7e-0755.1
NC_011059:670345:6821856821856836721488Prosthecochloris aestuarii DSM 271, complete genome6e-0755.1
NC_014323:3292082:3299680329968033007141035Herbaspirillum seropedicae SmR1 chromosome, complete genomeretron reverse transcriptase1e-0654.7
NC_012560:2451500:2457641245764124591581518Azotobacter vinelandii DJ, complete genomeRNA-directed DNA polymerase1e-0654.3
NC_021150:2451500:2457653245765324591701518Azotobacter vinelandii CA6, complete genomeRNA-directed DNA polymerase1e-0654.3
NC_015600:1161640:1166985116698511686431659Streptococcus pasteurianus ATCC 43144, complete genomereverse transcriptase1e-0653.9
NC_010170:4533416:4549438454943845511531716Bordetella petrii, complete genomereverse transcriptase3e-0653.1
NC_013421:1505176:151274715127471513718972Pectobacterium wasabiae WPP163, complete genomeretron reverse transcriptase4e-0652.8