Pre_GI: BLASTP Hits

Some Help

Query: NC_003277:22257:25877 Salmonella typhimurium LT2 plasmid pSLT, complete sequence

Start: 25877, End: 26140, Length: 264

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016861:22256:258972589726139243Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase1e-41167
NC_012779:1449500:146783114678311468157327Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-2097.1
NC_013940:110340:114781114781115206426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:110340:118558118558118983426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:110340:126010126010126435426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:137713:145667145667146092426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:25464:396023960240027426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:25464:448444484445269426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013940:25464:510155101551440426Deferribacter desulfuricans SSM1 megaplasmid pDF308, completetransposase, IS200 family7e-2095.9
NC_013364:5083949:510496051049605105559600Escherichia coli O111:H- str. 11128, complete genomeputative IS609 transposase TnpA1e-1994.7
NC_010519:1873190:187739818773981877814417Haemophilus somnus 2336 chromosome, complete genometransposase IS200-family protein5e-1993.2
NC_015723:2116090:212349921234992123750252Cupriavidus necator N-1 chromosome 2, complete sequenceDNA (cytosine-5-)-methyltransferase7e-1992.8
NC_017517:527687:549785549785550084300Neisseria meningitidis M01-240355 chromosome, complete genomeTransposase IS200 like family protein7e-1992.4
NC_017361:1528239:153398815339881534404417Helicobacter pylori SouthAfrica7 chromosome, complete genomeIS200 insertion sequence from SARA179e-1889
NC_007775:1153631:116124611612461161722477Synechococcus sp. JA-3-3Ab, complete genomeISSoc3, orfA transposase2e-1787.8
NC_007775:1153631:115363111536311154107477Synechococcus sp. JA-3-3Ab, complete genomeISSoc3, orfA transposase2e-1787.8
NC_010498:3291344:331005833100583310462405Escherichia coli SMS-3-5, complete genomeIS200 transposase orfA8e-1682.4
NC_015957:5225903:524773752477375248153417Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS200-family protein2e-1581.3
NC_009339:201897:222883222883223311429Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencetransposase IS200-family protein6e-1579.3
NC_012779:2127542:213211421321142132458345Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1477.4
NC_012108:4454705:445470544547054455037333Desulfobacterium autotrophicum HRM2, complete genometransposase (IS200 family protein)5e-1373.2
NC_009440:2093500:209818820981882098601414Metallosphaera sedula DSM 5348 chromosome, complete genometransposase IS200-family protein5e-1166.6
NC_012883:250758:255237255237255671435Thermococcus sibiricus MM 739, complete genomeIS element ISTsi3 orfA-like, probably transposase5e-1166.2
NC_015680:21500:362023620236507306Pyrococcus yayanosii CH1 chromosome, complete genomeIS element ISTsi3 orfA-like, probably transposase1e-1065.1
NC_015680:369777:382444382444382878435Pyrococcus yayanosii CH1 chromosome, complete genometransposase2e-1064.7
NC_012588:432869:432472432472432882411Sulfolobus islandicus M.14.25 chromosome, complete genometransposase IS200-family protein2e-1064.3
NC_003106:1027176:103498010349801035390411Sulfolobus tokodaii str. 7, complete genomehypothetical transposase3e-1063.9
NC_003106:1899691:190778719077871908197411Sulfolobus tokodaii str. 7, complete genomehypothetical transposase3e-1063.9
NC_003106:1065476:107805010780501078460411Sulfolobus tokodaii str. 7, complete genomehypothetical transposase3e-1063.9
NC_013385:1669510:167826816782681678666399Ammonifex degensii KC4, complete genometransposase IS200-family protein5e-1063.2
NC_012632:538967:548893548893549303411Sulfolobus islandicus M.16.27 chromosome, complete genometransposase IS200-family protein5e-1063.2
NC_003106:51854:592125921259622411Sulfolobus tokodaii str. 7, complete genomehypothetical transposase9e-1062.4
NC_017275:568722:575020575020575430411Sulfolobus islandicus HVE10/4 chromosome, complete genomeIS200/IS605 family OrfA transposase1e-0962
NC_017275:568722:590335590335590745411Sulfolobus islandicus HVE10/4 chromosome, complete genomeIS200/IS605 family OrfA transposase1e-0962
NC_009339:201897:219926219926220312387Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencetransposase IS200-family protein1e-0961.6
NC_002754:1329000:133472513347251335126402Sulfolobus solfataricus P2, complete genomeTransposase, putative2e-0961.2
NC_013192:618936:620038620038620436399Leptotrichia buccalis DSM 1135, complete genometransposase IS200-family protein3e-0960.5
NC_017276:362417:373693373693374100408Sulfolobus islandicus REY15A chromosome, complete genomeIS200/IS605 family OrfA transposase4e-0960.1
NC_017276:735678:752556752556752963408Sulfolobus islandicus REY15A chromosome, complete genomeIS200/IS605 family OrfA transposase4e-0960.1
NC_009486:1103915:110553611055361105775240Thermotoga petrophila RKU-1 chromosome, complete genome4e-0960.1
NC_012589:564343:582810582810583217408Sulfolobus islandicus L.S.2.15, complete genometransposase IS200-family protein6e-0959.3
NC_012589:564343:565543565543565950408Sulfolobus islandicus L.S.2.15, complete genometransposase IS200-family protein6e-0959.3
NC_017058:1152361:115812311581231158428306Rickettsia australis str. Cutlack chromosome, complete genometransposase IS200-family protein1e-0858.9
NC_012491:1187864:119533611953361195734399Brevibacillus brevis NBRC 100599, complete genomeputative transposase orfA for insertion sequence element IS200/IS605 group9e-0958.9
NC_017058:1200500:121767512176751217980306Rickettsia australis str. Cutlack chromosome, complete genometransposase IS200-family protein3e-0857.4
NC_015474:983468:998080998080998349270Pyrococcus sp. NA2 chromosome, complete genomeIS element ISTsi3 orfA-like, probably transposase8e-0855.8
NC_013792:180350:192199192199192597399Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencetransposase IS200-family protein1e-0755.5
NC_013642:574673:578032578032578421390Thermotoga naphthophila RKU-10, complete genometransposase IS200-family protein1e-0755.5
NC_010371:57683:659066590666301396Finegoldia magna ATCC 29328 plasmid pFMC, complete sequencetransposase1e-0755.5
NC_014221:687537:697307697307697702396Truepera radiovictrix DSM 17093 chromosome, complete genometransposase IS200-family protein2e-0754.7
NC_014221:591785:603809603809604204396Truepera radiovictrix DSM 17093 chromosome, complete genometransposase IS200-family protein2e-0754.7
NC_012030:81837:120764120764121153390Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completetransposase IS200-family protein3e-0753.9
NC_010364:3322:373363733637728393Halobacterium salinarum R1, complete genomeIS200-type transposase (ISH12)8e-0752.8
NC_002607:3322:363213632136713393Halobacterium sp. NRC-1, complete genomehypothetical protein8e-0752.8
NC_018870:427357:444112444112444513402Thermacetogenium phaeum DSM 12270 chromosome, complete genometransposase, IS200-family protein8e-0752.8
NC_020388:486803:495602495602495985384Natronomonas moolapensis 8.8.11 complete genomeIS200-type transposase7e-0752.8
NC_013216:426877:429285429285429689405Desulfotomaculum acetoxidans DSM 771, complete genometransposase IS200-family protein7e-0752.8
NC_020388:252500:285201285201285593393Natronomonas moolapensis 8.8.11 complete genomeIS200-type transposase7e-0752.8
NC_002506:207097:219825219825220262438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase6e-0752.8
NC_009456:787322:806473806473806910438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase6e-0752.8
NC_009456:998935:100583210058321006269438Vibrio cholerae O395 chromosome 1, complete sequenceIS1004 transposase6e-0752.8
NC_016945:207089:219805219805220242438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase6e-0752.8
NC_016446:979884:992600992600993037438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase6e-0752.8
NC_012667:46432:533295332953766438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase6e-0752.8
NC_012583:440420:457032457032457469438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase6e-0752.8
NC_012583:242760:254700254700255137438Vibrio cholerae O395 chromosome chromosome II, complete sequenceIS1004 transposase6e-0752.8
NC_012580:207025:219753219753220190438Vibrio cholerae M66-2 chromosome II, complete sequenceIS1004 transposase6e-0752.8
NC_014935:1389000:140131114013111401739429Nitratifractor saLSUginis DSM 16511 chromosome, complete genometransposase is200-family protein1e-0652.4
NC_014935:836868:844784844784845212429Nitratifractor saLSUginis DSM 16511 chromosome, complete genometransposase is200-family protein1e-0652.4
NC_007355:4740161:476542747654274765831405Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetransposase1e-0652.4
NC_010718:2673546:267468826746882675089402Natranaerobius thermophilus JW/NM-WN-LF, complete genometransposase IS200-family protein1e-0652.4
NC_012028:451982:482057482057482449393Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genometransposase IS200-family protein2e-0651.6
NC_009633:3933941:393551139355113935996486Alkaliphilus metalliredigens QYMF chromosome, complete genometransposase IS200-family protein2e-0651.6
NC_015416:2785514:279466627946662794893228Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein2e-0651.6
NC_014172:166485:202052202052202450399Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequencehypothetical protein1e-0651.6
NC_008262:784878:800340800340800657318Clostridium perfringens SM101, complete genomeISCpe2, transposase orfA1e-0651.6
NC_015697:116000:135619135619136029411Lactobacillus reuteri SD2112 chromosome, complete genometransposase2e-0651.2
NC_005126:1549066:156509915650991565539441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 Familly2e-0650.8
NC_005126:4857500:485755848575584857998441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 family2e-0650.8
NC_005126:4857500:485951648595164859956441Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS200 family2e-0650.8
NC_017269:303500:325369325369325806438Vibrio cholerae LMA3984-4 chromosome II, complete sequenceIS1004 transposase5e-0650.1
NC_016945:370471:428154428154428591438Vibrio cholerae IEC224 chromosome II, complete sequenceIS1004 transposase5e-0650.1
NC_016446:119914:128876128876129313438Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeIS1004 transposase5e-0650.1
NC_012667:931390:938381938381938818438Vibrio cholerae MJ-1236 chromosome 2, complete genomeIS1004 transposase5e-0650.1
NC_002506:370629:428335428335428772438Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeIS1004 transposase5e-0650.1