Pre_GI: BLASTP Hits

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Query: NC_003143:3115933:3128111 Yersinia pestis CO92, complete genome

Start: 3128111, End: 3128461, Length: 351

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2626996:263400526340052634313309Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-44177
NC_017154:3188795:319580431958043196112309Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-44177
NC_014029:3245778:325278732527873253095309Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-44177
NC_005810:1230976:124134612413461241654309Yersinia pestis biovar Microtus str. 91001, complete genome1e-44177
NC_008149:1195614:120262312026231202931309Yersinia pestis Nepal516, complete genomehypothetical protein1e-44177
NC_004088:1265730:127273912727391273047309Yersinia pestis KIM, complete genomehypothetical protein1e-44177
NC_008150:2822689:283438328343832834691309Yersinia pestis Antiqua, complete genomehypothetical protein1e-44177
NC_008800:3279468:3293587329358732947081122Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-41167
NC_015224:1440283:1443279144327914444001122Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein7e-41165
NC_004547:442927:4760144760144771351122Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-38156
NC_012880:1613485:1618086161808616192101125Dickeya dadantii Ech703, complete genomeCupin 4 family protein8e-38155
NC_015968:511282:5391045391045402251122Enterobacter asburiae LF7a chromosome, complete genomeCupin 4 family protein3e-32137
NC_013850:3340882:3372171337217133732921122Klebsiella variicola At-22 chromosome, complete genomeCupin 4 family protein2e-24110
NC_013716:1298932:1320238132023813213591122Citrobacter rodentium ICC168, complete genomehypothetical protein6e-24109
NC_002695:1571389:1593381159338115945021122Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-24109
NC_011353:1513000:1534309153430915354301122Escherichia coli O157:H7 str. EC4115 chromosome, complete genomecupin family protein6e-24109
NC_013008:1513000:1534597153459715357181122Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-24109
NC_013364:1477248:1497169149716914982901122Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-24109
AP010958:1305712:1324686132468613258161131Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative cytoplasmic protein5e-24109
NC_013353:1305712:1324686132468613258161131Escherichia coli O103:H2 str. 12009, complete genomecytoplasmic protein5e-24109
NC_002655:1655944:1677357167735716784871131Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-24109
NC_012947:2566754:2590777259077725918981122Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecupin7e-24108
NC_010498:1995500:2018270201827020193911122Escherichia coli SMS-3-5, complete genomecupin family protein7e-24108
NC_014121:2514544:2553535255353525546561122Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecupin 4 family protein1e-23108
CP002516:2786000:2809548280954828106691122Escherichia coli KO11, complete genometranscription factor jumonji jmjC domain-containing protein1e-22105
NC_016902:2786000:2809548280954828106691122Escherichia coli KO11FL chromosome, complete genometranscription factor jumonji jmjC domain-containing protein1e-22105
NC_020418:2910593:2932028293202829331491122Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-22104
NC_020211:2206500:2219358221935822204791122Serratia marcescens WW4, complete genomecupin superfamily protein2e-22104
NC_011205:2024458:2049856204985620509771122Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cupin family protein6e-22102
NC_011294:1896168:1921558192155819226791122Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-22102
NC_011274:1928939:1954325195432519554461122Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-22102
NC_011149:1870931:1896997189699718981181122Salmonella enterica subsp. enterica serovar Agona str. SL483,cupin family protein6e-22102
NC_012125:2531817:2557167255716725583181152Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-22102
NC_012752:1:5253525363561104Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidhypothetical protein5e-0959.7