Pre_GI: BLASTP Hits

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Query: NC_003030:3251941:3288152 Clostridium acetobutylicum ATCC 824, complete genome

Start: 3288152, End: 3288790, Length: 639

Host Lineage: Clostridium acetobutylicum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated in 1924 from garden soil in Connecticut, USA, by E. Wyer and L. Rettger. It is one of the best studied solventogenic clostridia. Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism is a benign saccharolytic and proteolytic soil bacterium capable of producing a number of organic solvents (solventogenic bacterium) through fermentation of various organic compounds. acetobutyricum were isolated by Chaim Weizman during the World War I and used to develop industrial starch-based acetone, butanol and ethanol fermentation processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017295:3250451:328740932874093288047639Clostridium acetobutylicum EA 2018 chromosome, complete genomeRNA polymerase factor sigma-701e-108392
NC_015687:3252233:328977932897793290417639Clostridium acetobutylicum DSM 1731 chromosome, complete genomeRNA polymerase factor sigma-701e-108392
NC_021182:4557608:459439445943944595038645Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma-H factor2e-81301
NC_008593:196257:216937216937217596660Clostridium novyi NT, complete genomeRNA polymerase sigma-H factor7e-80296
NC_015425:198315:221558221558222268711Clostridium botulinum BKT015925 chromosome, complete genomeRNA polymerase sigma-H factor1e-79295
NC_010516:3759136:379637737963773797018642Clostridium botulinum B1 str. Okra, complete genomeRNA polymerase sigma-H factor6e-78290
NC_010520:3788702:382597838259783826619642Clostridium botulinum A3 str. Loch Maree, complete genomeRNA polymerase sigma-H factor6e-78290
NC_012563:3956500:399330639933063993947642Clostridium botulinum A2 str. Kyoto, complete genomeRNA polymerase sigma-H factor6e-78290
NC_009698:3553365:359847835984783599119642Clostridium botulinum A str. Hall chromosome, complete genomeRNA polymerase factor sigma-706e-78290
NC_014393:4482896:452051745205174521170654Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-76284
NC_020291:166500:175261175261175881621Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeRNA polymerase sigma-H factor SigH7e-76283
NC_010723:223935:232933232933233553621Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma-H factor1e-75282
NC_010674:222016:231001231001231621621Clostridium botulinum B str. Eklund 17B, complete genomeRNA polymerase sigma-H factor1e-75282
NC_009617:163466:173671173671174342672Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeRNA polymerase factor sigma-704e-75280
NC_009495:3688138:372538037253803725952573Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeRNA polymerase factor sigma-701e-74279
NC_008262:2598920:263694326369432637590648Clostridium perfringens SM101, complete genomeRNA polymerase sigma-H factor2e-74278
NC_013216:293571:293571293571294215645Desulfotomaculum acetoxidans DSM 771, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-73274
NC_010424:214640:219240219240219890651Candidatus Desulforudis audaxviator MP104C, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-72271
NC_014220:2265882:227790422779042278557654Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-71266
NC_015958:2251619:231219523121952312839645Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit SigH1e-70266
NC_010321:393000:400932400932401576645Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA polymerase factor sigma-702e-70265
NC_010320:881351:886863886863887507645Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase factor sigma-702e-70265
NC_014964:388458:396348396348396992645Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA polymerase sigma-H factor2e-70265
NC_009633:4563877:459642045964204597061642Alkaliphilus metalliredigens QYMF chromosome, complete genomeRNA polymerase factor sigma-702e-69261
NC_010718:193231:199476199476200117642Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-68256
NC_017208:108134:111911111911112570660Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase factor sigma-709e-67253
NC_014171:109280:109860109860110519660Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase factor sigma-701e-66252
NC_015555:327562:335253335253335897645Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeRNA polymerase, sigma-24 subunit, SigH, ECF subfamily1e-65249
NC_014410:403776:411426411426412070645Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily2e-65248
NC_019970:336472:364927364927365571645Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRNA polymerase sigma-H factor4e-65247
NC_010382:4479464:448226744822674482914648Lysinibacillus sphaericus C3-41, complete genomeRNA polymerase sigma-H factor (sigma-30)7e-64243
NC_017294:1457262:148663114866311487272642Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeRNA polymerase sigma-H factor4e-61234
NC_015913:1491393:152024115202411520882642Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeRNA polymerase factor sigma-704e-61234
NC_004193:119737:122942122942123595654Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor5e-61233
NC_013316:81969:867408674087402663Clostridium difficile R20291, complete genomeRNA polymerase sigma-H factor8e-60229
NC_019978:178277:179975179975180622648Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma-H factor1e-57222
NC_014652:757381:775730775730776464735Caldicellulosiruptor hydrothermalis 108 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily8e-56216
NC_014392:1935130:195037219503721951106735Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-55216
NC_015520:2280643:230498623049862305636651Mahella australiensis 50-1 BON chromosome, complete genomeRNA polymerase sigma-30 subunit SigH2e-53209
NC_019978:2260395:228220222822022282888687Halobacteroides halobius DSM 5150, complete genomeRNA polymerase sigma factor, sigma-70 family7e-39160
NC_015737:2146953:214637521463752146956582Clostridium sp. SY8519, complete genomeDNA-directed RNA polymerase specialized sigma subunit5e-33140
NC_013207:19154:401344013440763630Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446RNA polymerase, sigma-24 subunit, ECF subfamily3e-23108
NC_013205:576583:602372602372603001630Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,RNA polymerase, sigma-24 subunit, ECF subfamily3e-23108
NC_017167:1648913:171892317189231719552630Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1ECF subfamily RNA polymerase sigma-24 subunit6e-22103
NC_017167:2298962:232631423263142326943630Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1ECF subfamily RNA polymerase sigma-24 subunit2e-21102
NC_014479:509919:510693510693511481789Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeRNA polymerase sigma factor SigB2e-0859.3
NC_014976:2735423:273726627372662738054789Bacillus subtilis BSn5 chromosome, complete genomeRNA polymerase sigma factor SigB2e-0859.3
NC_000964:521975:522417522417523211795Bacillus subtilis subsp. subtilis str. 168, complete genomesigma factor B2e-0859.3
NC_016047:637778:639621639621640409789Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeRNA polymerase sigma-B factor2e-0859.3
NC_019896:3491000:351722135172213518015795Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigB4e-0858.2
NC_012673:2023297:202719120271912027991801Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma 28 subunit, Sig B/F/G subfamily2e-0755.8
NC_014219:567033:568900568900569706807Bacillus selenitireducens MLS10 chromosome, complete genometranscriptional regulator, LuxR family4e-0754.7
NC_018704:347948:352252352252353040789Amphibacillus xylanus NBRC 15112, complete genomeRNA polymerase sigma-B factor6e-0754.3
NC_019842:484933:485381485381486169789Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,RNA polymerase sigma factor SigB2e-0652.8
NC_009725:496443:497217497217498005789Bacillus amyloliquefaciens FZB42, complete genomeSigB2e-0652.8
NC_020410:495184:495958495958496746789Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase sigma-B factor2e-0652.8
NC_014551:483773:484547484547485335789Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase sigma-37 factor (sigma(B))2e-0652.8
NC_017188:461177:461951461951462739789Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigB2e-0652.8
NC_017190:466236:466684466684467472789Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma-37 factor (sigma(B))2e-0652.8
NC_017191:467207:467981467981468769789Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigB2e-0652.8
NC_008710:819389:820347820347821150804Borrelia turicatae 91E135, complete genomeRNA polymerase sigma factor RpoS4e-0651.6