Pre_GI Gene

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Host: NC_009617 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009617:163466 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1634661648421377DNA repair protein RadAQuickGO ontologyBLASTP
1650811661451065DNA integrity scanning protein DisAQuickGO ontologyBLASTP
1663881674881101PilT domain-containing proteinQuickGO ontologyBLASTP
1675101681906812-C-methyl-D-erythritol 4-phosphate cytidylyltransferaseQuickGO ontologyBLASTP
1685831702951713prolyl-tRNA synthetaseQuickGO ontologyBLASTP
1703131717131401cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
171763172176414ribonuclease IIIQuickGO ontologyBLASTP
172207173109903RNA methyltransferaseQuickGO ontologyBLASTP
173123173635513hypothetical proteinBLASTP
173671174342672RNA polymerase factor sigma-70QuickGO ontologyBLASTP
17441917449476tRNA-ThrQuickGO ontology
1745601757531194elongation factor TuQuickGO ontologyBLASTP
17593117608015050S ribosomal protein L33QuickGO ontologyBLASTP
176129176359231preprotein translocase subunit SecEQuickGO ontologyBLASTP
176373176918546transcription antitermination protein NusGQuickGO ontologyBLASTP
17699717742242650S ribosomal protein L11QuickGO ontologyBLASTP
17747717816669050S ribosomal protein L1QuickGO ontologyBLASTP
17836917887250450S ribosomal protein L10QuickGO ontologyBLASTP
17892417928936650S ribosomal protein L7L12QuickGO ontologyBLASTP
1796201833303711DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
1833521868883537DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
18714518752237830S ribosomal protein S12QuickGO ontologyBLASTP
18767218814247130S ribosomal protein S7QuickGO ontologyBLASTP
1882261902922067elongation factor GQuickGO ontologyBLASTP