Pre_GI: BLASTP Hits

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Query: NC_002944:1881405:1903102 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1903102, End: 1904640, Length: 1539

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010524:4644587:4685004468500446864761473Leptothrix cholodnii SP-6, complete genomePAS/PAC sensor signal transduction histidine kinase3e-37156
NC_009675:3067567:3087792308779230907312940Anaeromyxobacter sp. Fw109-5 chromosome, complete genomemulti-sensor signal transduction histidine kinase9e-37155
NC_016887:3255500:3263650326365032653681719Nocardia cyriacigeorgica GUH-2, complete genometwo-component system sensor kinase, putative GAF domains, dosS gene6e-31135
NC_012483:483425:5242655242655266102346Acidobacterium capsulatum ATCC 51196, complete genomesigma-54 dependent transcriptional regulator, Fis family4e-28126
NC_007650:1192310:1192310119231011947482439Burkholderia thailandensis E264 chromosome II, complete sequencesensory box histidine kinase2e-27124
NC_011894:6708970:6710443671044367124251983Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase3e-27123
NC_010159:1710268:1712903171290317149842082Yersinia pestis Angola, complete genomeputative sensory box-containing diguanylate cyclase3e-27123
NC_008800:1942000:1961046196104619631212076Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-27122
NC_017249:7917586:7930165793016579321591995Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator2e-26120
NC_007484:1975322:1975322197532219774782157Nitrosococcus oceani ATCC 19707, complete genomePAS sensor signal transduction histidine kinase7e-26119
NC_011894:3623500:3624775362477536267631989Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase1e-25118
NC_012988:4075429:4091338409133840933351998Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS and response regulator receiver domains1e-24114
NC_013037:6209424:6240723624072362449374215Dyadobacter fermentans DSM 18053, complete genomeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor3e-24113
NC_007348:752692:7526927526927546111920Ralstonia eutropha JMP134 chromosome 2, complete sequencePAS4e-24113
NC_010172:3712000:3725376372537637274122037Methylobacterium extorquens PA1, complete genomePAS sensor protein5e-24112
NC_004463:2344128:2350024235002423519281905Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator5e-24112
NC_017249:4365935:4380207438020743825702364Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-22108
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase4e-22106
NC_003295:199354:2122532122532136291377Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE TWO COMPONENT SYSTEM SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN5e-22106
NC_007645:3712272:3726842372684237291782337Hahella chejuensis KCTC 2396, complete genomeSignal transduction histidine kinase6e-22105
NC_014315:1463383:1483162148316214853272166Nitrosococcus watsoni C-113 chromosome, complete genomemulti-sensor signal transduction histidine kinase6e-22105
NC_007951:2045830:2054351205435120567202370Burkholderia xenovorans LB400 chromosome 1, complete sequencePAS/PAC Sensor Hybrid Histidine Kinase2e-21103
NC_013960:452493:4651284651284671822055Nitrosococcus halophilus Nc4 chromosome, complete genomePAS sensor protein1e-20101
NC_008313:2142397:2158811215881121604151605Ralstonia eutropha H16 chromosome 1, complete sequencesignal transduction histidine kinase containing PAS/PAC sensor domain3e-20100
NC_008149:2652825:2656187265618726575421356Yersinia pestis Nepal516, complete genomehypothetical protein8e-2099
NC_015381:2405446:2405446240544624075182073Burkholderia gladioli BSR3 chromosome 1, complete sequenceSensory box histidine kinase2e-1997.8
NC_003552:1492500:1513317151331715176874371Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase6e-1995.9
NC_008149:2652825:265546026554602655978519Yersinia pestis Nepal516, complete genomePAS2e-1894.7
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit6e-1892.8
NC_015376:1752883:1753907175390717561322226Burkholderia gladioli BSR3 chromosome chromosome 2, completeMulti-sensor signal transduction histidine kinase8e-1892
NC_009483:2640403:2640403264040326430782676Geobacter uraniireducens Rf4 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-1790.9
NC_010506:5155951:5177746517774651792451500Shewanella woodyi ATCC 51908, complete genomemethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor2e-1790.9
NC_014640:4532095:4532095453209545332881194Achromobacter xylosoxidans A8 chromosome, complete genomesensory box protein 81e-1688.2
NC_002947:4167500:4233549423354942350601512Pseudomonas putida KT2440, complete genomesensory box protein2e-1687.4
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein3e-1687
NC_014844:3469848:3485824348582434885982775Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePAS sensor protein5e-1686.3
NC_016599:513357:5346775346775370072331Owenweeksia hongkongensis DSM 17368 chromosome, complete genomePAS domain-containing protein9e-1685.5
NC_008027:2397255:2397255239725523993662112Pseudomonas entomophila L48, complete genomesensory box protein2e-1584.7
NC_016626:1699500:1709507170950717110331527Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAS/PAC sensor hybrid histidine kinase9e-1582
NC_008576:3331825:3339175333917533425313357Magnetococcus sp. MC-1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1481.6
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase3e-1480.5
NC_010511:6711836:6716700671670067182411542Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase3e-1480.1
NC_012808:3711806:3728812372881237304761665Methylobacterium extorquens AM1, complete genome5e-1479.7
NC_009348:2034500:2047816204781620491141299Aeromonas salmonicida subsp. salmonicida A449, complete genomeGGDEF domain-containing protein7e-1479.3
NC_015376:3249773:3264864326486432672962433Burkholderia gladioli BSR3 chromosome chromosome 2, completesensory box sensor histidine kinase/response regulator7e-1479.3
NC_008577:2402165:2402165240216524055243360Shewanella sp. ANA-3 chromosome 1, complete sequenceputative PAS/PAC sensor protein7e-1479
NC_007760:4055860:4055860405586040591263267Anaeromyxobacter dehalogenans 2CP-C, complete genomePAS/PAC sensor hybrid histidine kinase1e-1378.6
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase1e-1378.6
NC_013223:1763631:1767581176758117688101230Desulfohalobium retbaense DSM 5692, complete genomeputative PAS/PAC sensor protein1e-1378.2
NC_007952:3037590:3047313304731330486111299Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative diguanylate cyclase (GGDEF domain)3e-1377
NC_007645:4356865:4375157437515743771962040Hahella chejuensis KCTC 2396, complete genomeBacteriophytochrome (light-regulated signal transduction histidine kinase)4e-1376.6
NC_012880:3645304:3661255366125536653794125Dickeya dadantii Ech703, complete genomemulti-sensor hybrid histidine kinase7e-1375.9
NC_011886:1891077:1913122191312219147291608Arthrobacter chlorophenolicus A6, complete genomeGAF sensor signal transduction histidine kinase8e-1375.9
NC_009254:442360:4467484467484480461299Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase with PAS/PAC sensor9e-1375.5
NC_007355:2039435:2054203205420320570402838Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesensory transduction histidine kinase2e-1274.7
NC_007355:2426000:2426018242601824297643747Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesignal-transducing histidine kinase2e-1274.3
NC_015574:1474967:1492207149220714946212415Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase3e-1273.9
NC_015589:3053504:3051538305153830535321995Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeATP-binding region ATPase domain-containing protein3e-1273.6
NC_016010:1822212:1896930189693018997852856Xanthomonas axonopodis pv. citrumelo F1 chromosome, completesensory box histidine kinase/response regulator hybrid4e-1273.6
NC_014221:792363:7923637923637935231161Truepera radiovictrix DSM 17093 chromosome, complete genometranscriptional regulator, LuxR family5e-1273.2
NC_010524:4644587:4681343468134346845943252Leptothrix cholodnii SP-6, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)6e-1272.8
NC_015666:1849618:1849618184961818519842367Halopiger xanaduensis SH-6 chromosome, complete genomeputative PAS/PAC sensor protein9e-1272
NC_013552:1187299:1215292121529212163531062Dehalococcoides sp. VS, complete genomesensory box sensor histidine kinase2e-1171.2
NC_012660:3179980:3203836320383632061512316Pseudomonas fluorescens SBW25 chromosome, complete genomeputative aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA2e-1171.2
NC_007005:2191500:2211083221108322134222340Pseudomonas syringae pv. syringae B728a, complete genomePAS2e-1170.9
NC_009464:2288500:2304043230404323058931851Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase1e-1068.6
NC_013922:138246:1783721783721794301059Natrialba magadii ATCC 43099 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase1e-1068.2
NC_002936:1395432:1406081140608114071151035Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase1e-1068.2
NC_007626:3522265:3595421359542135977692349Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase2e-1067.8
NC_010505:5525461:5546057554605755497313675Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase2e-1067.8
NC_007520:407627:4287244287244303461623Thiomicrospira crunogena XCL-2, complete genomediguanylate cyclase (GGDEF domain) with PAS/PAC sensor3e-1067
NC_014314:1485500:1504752150475215065751824Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completemulti-sensor signal transduction histidine kinase8e-1065.5
NC_013890:808791:8152388152388190263789Dehalococcoides sp. GT chromosome, complete genomePAS/PAC sensor hybrid histidine kinase1e-0965.1
NC_010814:190673:200246200246200680435Geobacter lovleyi SZ, complete genomeputative PAS/PAC sensor protein1e-0965.1
NC_014972:137184:1371841371841390941911Desulfobulbus propionicus DSM 2032 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-0963.9
NC_004547:2285092:2306203230620323080111809Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenitrate/nitrite sensor kinase4e-0963.5
NC_011894:6516856:6541953654195365438601908Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase5e-0963.2
NC_010676:3009980:3040903304090330440163114Burkholderia phytofirmans PsJN chromosome 2, complete sequencediguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s)6e-0962.8
NC_015675:4493758:4506118450611845079111794Mesorhizobium opportunistum WSM2075 chromosome, complete genomesignal transduction histidine kinase6e-0962.8
NC_015320:160792:1662711662711683372067Archaeoglobus veneficus SNP6 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase6e-0962.8
NC_009483:1779601:1802418180241818049162499Geobacter uraniireducens Rf4 chromosome, complete genomemulti-sensor signal transduction histidine kinase9e-0962.4
NC_015216:1647462:1668202166820216715523351Methanobacterium sp. AL-21 chromosome, complete genomemulti-sensor signal transduction histidine kinase9e-0962.4
NC_016629:3629848:3636242363624236398503609Desulfovibrio africanus str. Walvis Bay chromosome, completemulti-sensor hybrid histidine kinase1e-0862
NC_013552:68003:8478484784858751092Dehalococcoides sp. VS, complete genomesensor histidine kinase1e-0862
NC_017075:4259460:4259460425946042621742715Rubrivivax gelatinosus IL144, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase1e-0861.6
NC_013744:300000:3029693029693056202652Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completePAS/PAC sensor signal transduction histidine kinase1e-0861.6
NC_020389:2288541:2315191231519123189703780Methanosarcina mazei Tuc01, complete genomehypothetical protein2e-0861.2
NC_003552:1492500:1510392151039215122421851Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase2e-0860.8
NC_020388:1428042:1431072143107214328891818Natronomonas moolapensis 8.8.11 complete genomesensor box histidine kinase2e-0860.8
NC_020995:2255521:2256907225690722579741068Enterococcus casseliflavus EC20, complete genometwo-component system sensor histidine kinase2e-0860.8
NC_015136:1101725:1101725110172511059364212Burkholderia sp. CCGE1001 chromosome 1, complete sequencesignal transduction histidine kinase with CheB and CheR activity3e-0860.5
NC_009633:2137999:2153158215315821554792322Alkaliphilus metalliredigens QYMF chromosome, complete genomePAS/PAC sensor hybrid histidine kinase3e-0860.5
NC_003901:2906493:2906493290649329091502658Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase3e-0860.5
NC_009464:2687445:2715346271534627168541509Uncultured methanogenic archaeon RC-I, complete genomepredicted signal transduction histidine kinase4e-0860.1
NC_018012:1076839:1097004109700411013204317Thiocystis violascens DSM 198 chromosome, complete genomePAS domain-containing protein5e-0859.7
NC_012030:400515:4137984137984163742577Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase6e-0859.3
NC_016027:1647110:1663782166378216660402259Gluconacetobacter xylinus NBRC 3288, complete genomec-di-GMP phosphodiesterase A1e-0758.5
NC_003901:2685716:2711444271144427152233780Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase2e-0758.2
NC_012988:4387735:439788543978854398328444Methylobacterium extorquens DM4, complete genomePAS/PAC sensor protein2e-0758.2
NC_012808:3897751:390841939084193908862444Methylobacterium extorquens AM1, complete genomeputative PAS/PAC sensor protein2e-0758.2
NC_007168:665284:6812866812866823201035Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-0757.4
NC_009901:2787978:2787978278797827912593282Shewanella pealeana ATCC 700345, complete genomehistidine kinase3e-0757.4
NC_012030:345837:3493413493413511041764Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase2e-0757.4
NC_015138:3160764:3160764316076431653684605Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completesignal transduction histidine kinase with CheB and CheR activity2e-0757.4
NC_011146:2485625:2485625248562524894073783Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase2e-0757.4
NC_011757:3486283:3521250352125035240782829Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase3e-0757
NC_003295:2507850:2511607251160725127581152Ralstonia solanacearum GMI1000, complete genomePUTATIVE TWO-COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPTION REGULATOR PROTEIN3e-0757
NC_010511:6067000:609034760903476090772426Methylobacterium sp. 4-46 chromosome, complete genomeputative PAS/PAC sensor protein3e-0757
NC_008346:1499963:1525038152503815264531416Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeHD-GYP domain-like protein4e-0757
NC_009464:1804791:1818083181808318203472265Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase4e-0756.6
NC_012660:3179980:3206798320679832079491152Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system sensor kinase4e-0756.6
NC_015320:160792:1633571633571662782922Archaeoglobus veneficus SNP6 chromosome, complete genomePAS sensor protein4e-0756.6
NC_003450:179689:194601194601195038438Corynebacterium glutamicum ATCC 13032, complete genomePAS/PAC domain-containing protein4e-0756.6
NC_006958:179690:194602194602195039438Corynebacterium glutamicum ATCC 13032, complete genomeSENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT4e-0756.6
NC_009464:2288500:2302497230249723039211425Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase6e-0756.2
NC_013526:316075:3363983363983404894092Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomePAS/PAC sensor hybrid histidine kinase9e-0755.5
NC_004193:2921103:2934906293490629360481143Oceanobacillus iheyensis HTE831, complete genometwo-component sensor histidine kinase9e-0755.5
NC_012880:2425330:2438701243870124408572157Dickeya dadantii Ech703, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0655.1
NC_010609:1077453:1076405107640510774601056Lactobacillus reuteri JCM 1112, complete genometwo component sensor histidine kinase1e-0655.1
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)1e-0655.1
NC_014500:2589089:2601375260137526036332259Dickeya dadantii 3937 chromosome, complete genomesensory box/GGDEF family protein1e-0655.1
NC_009484:1434000:1437294143729414390691776Acidiphilium cryptum JF-5 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer2e-0654.7
NC_013501:1140390:1161733116173311648223090Rhodothermus marinus DSM 4252, complete genomemulti-sensor signal transduction histidine kinase2e-0654.7
NC_012483:483425:4969904969904998002811Acidobacterium capsulatum ATCC 51196, complete genomesensory box sensor histidine kinase2e-0654.3
NC_008752:2615360:2636818263681826414254608Acidovorax avenae subsp. citrulli AAC00-1, complete genomesignal transduction histidine kinase with CheB and CheR activity3e-0653.9
NC_009483:2401209:2413079241307924151722094Geobacter uraniireducens Rf4 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-0653.5
NC_006510:2110430:2127659212765921286811023Geobacillus kaustophilus HTA426, complete genometwo-component sensor histidine kinase4e-0653.5
NC_007951:2904644:2906217290621729075961380Burkholderia xenovorans LB400 chromosome 1, complete sequencePeriplasmic sensor signal transduction Histidine Kinase3e-0653.5
NC_014915:2092678:2107905210790521089241020Geobacillus sp. Y412MC52 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0653.5
NC_013411:2951559:2967974296797429689931020Geobacillus sp. Y412MC61, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0653.5
NC_014206:1497942:1507419150741915084381020Geobacillus sp. C56-T3 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0653.5
NC_007795:1922000:1973581197358119746241044Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehistidine kinase, putative5e-0653.1
NC_011832:2668337:2683714268371426862482535Candidatus Methanosphaerula palustris E1-9c, complete genomePAS/PAC sensor signal transduction histidine kinase7e-0652.8
NC_013173:1712138:1712138171213817153653228Desulfomicrobium baculatum DSM 4028, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)9e-0652.4