Pre_GI Gene

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Host: NC_020389 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020389:2288541 Methanosarcina mazei Tuc01, complete genome

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
228854122899411401Hypothetical proteinQuickGO ontologyBLASTP
22900842290737654HydantoinaseQuickGO ontologyBLASTP
22913552291504150hypothetical proteinBLASTP
22916932291989297Hypothetical proteinQuickGO ontology
22920052292349345Hypothetical proteinQuickGO ontology
22923722292755384hypothetical proteinBLASTP
22927892293586798hypothetical proteinBLASTP
22940212294329309SSU ribosomal protein S20e S10pQuickGO ontologyBLASTP
229436822956361269Translation elongation factor 1 alpha subunitQuickGO ontologyBLASTP
229587422977961923Translation elongation factor 2QuickGO ontologyBLASTP
22978602298420561SSU ribosomal protein S5e S7pQuickGO ontologyBLASTP
22984252298853429SSU ribosomal protein S23e S12pQuickGO ontologyBLASTP
22989592299384426NusA protein -like protein archaealQuickGO ontologyBLASTP
22994052299701297LSU ribosomal protein L30eQuickGO ontologyBLASTP
22997962299912117hypothetical protein
229995123011741224DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
230117423038162643DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
230383023056441815DNA-directed RNA polymerase subunit BQuickGO ontologyBLASTP
230565923072541596DNA-directed RNA polymerase subunit BQuickGO ontologyBLASTP
23074742307797324DNA-directed RNA polymerase subunit HQuickGO ontologyBLASTP
23082092308730522sensory transduction histidine kinaseQuickGO ontologyBLASTP
23088512309051201sensory transduction histidine kinaseQuickGO ontologyBLASTP
23111792311307129hypothetical protein
231152223148033282sensory transduction histidine kinaseQuickGO ontologyBLASTP
231519123189703780hypothetical proteinBLASTP