Pre_GI Gene

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Host: NC_013890 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013890:808791 Dehalococcoides sp. GT chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8087918100621272major facilitator superfamily MFS_1QuickGO ontologyBLASTP
810416810655240hypothetical protein
810639811121483hypothetical protein
811794812303510hypothetical protein
812343812579237hypothetical protein
812829813080252hypothetical protein
813281813670390amino acid-binding ACT domain proteinQuickGO ontologyBLASTP
8136918150101320Phenylacetate--CoA ligaseQuickGO ontologyBLASTP
8152388190263789PASPAC sensor hybrid histidine kinaseQuickGO ontologyBLASTP
819297819866570hypothetical proteinBLASTP
82028582036177tRNA-IleQuickGO ontology
820678822162148516S ribosomal RNAQuickGO ontologyBLASTP
822919823518600hypothetical protein
82355082362677tRNA-GluQuickGO ontology
82363982371274tRNA-GlnQuickGO ontology
823802823933132hypothetical protein
824031824777747ribonuclease IIIQuickGO ontologyBLASTP
824807824947141hypothetical protein
824969825244276acylphosphataseQuickGO ontologyBLASTP
825271826005735hypothetical protein
8265368280291494Leucyl aminopeptidaseQuickGO ontologyBLASTP
828029828631603hypothetical proteinBLASTP
828680829537858degV family proteinQuickGO ontologyBLASTP
8296208311371518AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
8317078330711365pyridoxal-phosphate dependent TrpB-like enzymeQuickGO ontologyBLASTP