Pre_GI Gene

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Host: NC_003552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003552:1492500 Methanosarcina acetivorans C2A, complete genome

Host Lineage: Methanosarcina acetivorans; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This wild-type strain (C2A; DSM2834) is the type strain of this species and was isolated from marine sediment. Anaerobic methane-producing archeon. This organism is a strictly anaerobic, nonmotile, methane-producing Archaea responsible for virtually all biogenic methane production, a process of critical importance as a key step in the global carbon cycle. This process results in the production of significant amounts of greenhouse gas. This organism is also important in production of alternative fuels and plays a role in both agricultural and waste treatment industry. Optimal growth occurs at pH 6.5-7.0.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14928971493604708haloacid dehalogenase-like hydrolase family proteinQuickGO ontologyBLASTP
14945861494996411hypothetical protein
14952721495499228hypothetical protein
1495601149590930930S ribosomal protein S10QuickGO ontologyBLASTP
149594814972161269elongation factor TuQuickGO ontologyBLASTP
149754414997362193elongation factor EF-2QuickGO ontologyBLASTP
1499809150037857030S ribosomal protein S7QuickGO ontologyBLASTP
1500375150080342930S ribosomal protein S12QuickGO ontologyBLASTP
15009071501356450transcription elongation factor NusAQuickGO ontologyBLASTP
15013531501652300ribosomal protein L30eQuickGO ontologyBLASTP
150190515030981194DNA-directed RNA polymerase subunit AQuickGO ontologyBLASTP
150310415057462643DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
150576115075751815DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
150758915092411653DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
15093981509634237DNA-directed RNA polymerase subunit HQuickGO ontologyBLASTP
151039215122421851sensory transduction histidine kinaseQuickGO ontologyBLASTP
15122741512720447response regulator receiverQuickGO ontologyBLASTP
15127791513219441response regulator receiverQuickGO ontologyBLASTP
151331715176874371sensory transduction histidine kinaseQuickGO ontologyBLASTP