Pre_GI: BLASTP Hits

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Query: NC_001263:1378605:1395015 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1395015, End: 1395674, Length: 660

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2661795:267475226747522675414663Clostridium thermocellum ATCC 27405, complete genomephosphoribosyltransferase1e-1893.2
NC_020134:2772500:278411627841162784880765Clostridium stercorarium subsp. stercorarium DSM 8532, completephosphoribosyltransferase1e-1790.1
NC_015571:440605:465049465049465789741Porphyromonas gingivalis TDC60, complete genomecompetence protein F-like protein3e-1788.6
NC_002950:155873:180315180315181055741Porphyromonas gingivalis W83, complete genomecompetence protein F-related protein3e-1788.6
NC_010729:265791:290164290164290904741Porphyromonas gingivalis ATCC 33277, complete genomeprobable amidophosphoribosyl-transferase5e-1787.8
NC_003919:457482:459857459857460588732Xanthomonas axonopodis pv. citri str. 306, complete genomecompetence protein F3e-1685.5
NC_015510:4982255:500506950050695005773705Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomephosphoribosyltransferase2e-1685.5
NC_019978:2260395:227951322795132280253741Halobacteroides halobius DSM 5150, complete genomeputative amidophosphoribosyltransferase3e-1685.1
NC_009633:760872:771594771594772322729Alkaliphilus metalliredigens QYMF chromosome, complete genomephosphoribosyltransferase1e-1583.2
NC_009922:2721343:273083327308332731519687Alkaliphilus oremlandii OhILAs, complete genomecompetence protein F, putative2e-1582
NC_018664:239000:245616245616246338723Clostridium acidurici 9a chromosome, complete genomephosphoribosyltransferase6e-1580.9
NC_013730:6707812:671359767135976714316720Spirosoma linguale DSM 74, complete genomephosphoribosyltransferase9e-1580.1
NC_007086:459934:463478463478464209732Xanthomonas campestris pv. campestris str. 8004, complete genomecompetence protein F1e-1480.1
NC_010688:449649:450727450727451458732Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-1480.1
NC_003902:461808:462886462886463617732Xanthomonas campestris pv. campestris str. ATCC 33913, completecompetence protein F1e-1480.1
NC_010723:485874:507287507287507940654Clostridium botulinum E3 str. Alaska E43, complete genomecompetence protein F1e-1479.7
NC_007484:2392739:241602424160242416764741Nitrosococcus oceani ATCC 19707, complete genomecompetence protein F5e-1477.8
NC_017271:4410500:442881744288174429542726Xanthomonas campestris pv. raphani 756C chromosome, completecompetence protein F1e-1376.6
NC_020054:587300:592201592201592824624Fibrella aestuarina BUZ 2 drat genomephosphoribosyltransferase1e-1376.6
NC_007519:791679:805083805083805838756Desulfovibrio alaskensis G20 chromosome, complete genomeComF family protein2e-1376.3
NC_002488:45219:573285732858053726Xylella fastidiosa 9a5c, complete genomecompetence protein F5e-1374.7
NC_010513:44886:564885648857213726Xylella fastidiosa M12 chromosome, complete genomecompetence protein F4e-1374.7
NC_008255:4043045:404431440443144045024711Cytophaga hutchinsonii ATCC 33406, complete genomeamidophosphoribosyltransferase5e-1374.3
NC_018748:1916012:193334119333411934027687Emticicia oligotrophica DSM 17448 chromosome, complete genomephosphoribosyltransferase2e-1272.4
NC_014655:2874640:289247128924712893151681Leadbetterella byssophila DSM 17132 chromosome, complete genomephosphoribosyltransferase4e-1271.6
NC_013173:3854368:385364638536463854371726Desulfomicrobium baculatum DSM 4028, complete genomeComF family protein5e-1271.2
NC_015581:1791658:181231618123161813002687Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomephosphoribosyltransferase9e-1270.5
NC_011661:1411383:142613414261341426829696Dictyoglomus turgidum DSM 6724, complete genomehypothetical protein4e-1168.2
NC_015389:481282:503799503799504569771Coriobacterium glomerans PW2 chromosome, complete genomehypothetical protein5e-1168.2
NC_006370:166000:182043182043182756714Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical ComF-related protein7e-1167.4
NC_003450:788000:794714794714795304591Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein5e-1064.3
NC_009342:951761:954963954963955553591Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-1064.3
NC_009052:144619:162094162094162885792Shewanella baltica OS155, complete genomecompetence protein ComF4e-0961.6
NC_021182:4427468:442917244291724429849678Clostridium pasteurianum BC1, complete genomeputative amidophosphoribosyltransferase6e-0960.8
NC_013205:2610956:265020126502012650938738Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,ComF family protein9e-0960.5
NC_016935:75186:989059890599672768Paenibacillus mucilaginosus 3016 chromosome, complete genomeComFC protein2e-0859.3
NC_015690:75223:988729887299639768Paenibacillus mucilaginosus KNP414 chromosome, complete genomeComFC2e-0859.3
NC_010718:2385400:239948423994842400395912Natranaerobius thermophilus JW/NM-WN-LF, complete genomeamidophosphoribosyltransferase-like protein3e-0858.5
NC_015311:365007:372501372501373190690Prevotella denticola F0289 chromosome, complete genomecomF family protein4e-0858.2
NC_013406:6568273:658940865894086590232825Paenibacillus sp. Y412MC10 chromosome, complete genomeamidophosphoribosyltransferase-like protein6e-0857.4
NC_015966:1661329:166348616634861664199714Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomephosphoribosyltransferase2e-0755.8
NC_019897:128610:172540172540173451912Thermobacillus composti KWC4 chromosome, complete genomeamidophosphoribosyltransferase3e-0755.5
NC_008596:1933836:195464619546461955299654Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein3e-0652