Pre_GI: OUP Neighbours

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Query: NC_015410:2144387 Pseudomonas mendocina NK-01 chromosome, complete genome

D: 41.6723

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

Number of Neighbours: 100




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_005085:1870890Chromobacterium violaceum ATCC 12472, complete genome75.5668 %Subject → Query22.7566
NC_007005:1036243Pseudomonas syringae pv. syringae B728a, complete genome77.019 %Subject → Query25.0474
NC_010645:73573Bordetella avium 197N, complete genome76.1581 %Subject → Query26.1274
NC_010501:2511887Pseudomonas putida W619, complete genome78.4712 %Subject → Query26.4487
NC_007908:1600244*Rhodoferax ferrireducens T118, complete genome77.2672 %Subject → Query26.4693
NC_014366:1814000*Gamma proteobacterium HdN1, complete genome75.7904 %Subject → Query26.7662
NC_004578:895019*Pseudomonas syringae pv. tomato str. DC3000, complete genome75.9712 %Subject → Query26.9907
NC_007298:1721425Dechloromonas aromatica RCB, complete genome78.1219 %Subject → Query27.1109
NC_004578:20738Pseudomonas syringae pv. tomato str. DC3000, complete genome75.6648 %Subject → Query27.4072
NC_015740:2587323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete78.6029 %Subject → Query27.6356
NC_007298:778723Dechloromonas aromatica RCB, complete genome80.2819 %Subject → Query27.8158
NC_002932:296557*Chlorobium tepidum TLS, complete genome76.7463 %Subject → Query27.8605
NC_015458:3390674Pusillimonas sp. T7-7 chromosome, complete genome76.6238 %Subject → Query28.3408
NC_013422:2004478Halothiobacillus neapolitanus c2, complete genome78.5172 %Subject → Query28.3743
NC_007512:2024880*Pelodictyon luteolum DSM 273, complete genome80.2972 %Subject → Query28.5849
NC_007761:781210*Rhizobium etli CFN 42, complete genome75.3585 %Subject → Query28.9946
NC_007298:1418500*Dechloromonas aromatica RCB, complete genome76.6789 %Subject → Query29.1305
NC_015733:2658337Pseudomonas putida S16 chromosome, complete genome79.8897 %Subject → Query29.2639
NC_007947:797456Methylobacillus flagellatus KT, complete genome75.9559 %Subject → Query29.3531
NC_002947:4994335Pseudomonas putida KT2440, complete genome78.0178 %Subject → Query29.604
NC_014355:2775979Candidatus Nitrospira defluvii, complete genome78.3578 %Subject → Query29.6922
NC_008260:2442000Alcanivorax borkumensis SK2, complete genome76.2132 %Subject → Query29.8213
NC_013446:2961647*Comamonas testosteroni CNB-2, complete genome76.6973 %Subject → Query29.9468
NC_014836:2723060Desulfurispirillum indicum S5 chromosome, complete genome77.3897 %Subject → Query30.2378
NC_007298:2568851Dechloromonas aromatica RCB, complete genome76.2194 %Subject → Query30.6451
NC_005773:4797242Pseudomonas syringae pv. phaseolicola 1448A, complete genome77.3315 %Subject → Query30.7403
NC_011027:1427343Chlorobaculum parvum NCIB 8327, complete genome75.0276 %Subject → Query30.7775
NC_008260:1044440*Alcanivorax borkumensis SK2, complete genome75.2359 %Subject → Query30.791
NC_008740:1815743Marinobacter aquaeolei VT8, complete genome77.0833 %Subject → Query30.7946
NC_015379:1887275*Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,84.5374 %Subject → Query31.0848
NC_014394:2765261*Gallionella capsiferriformans ES-2 chromosome, complete genome75.3799 %Subject → Query31.2926
NC_007005:1636875Pseudomonas syringae pv. syringae B728a, complete genome75.9957 %Subject → Query31.3458
NC_009667:1934818Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence75.8149 %Subject → Query31.3936
NC_004578:5336773*Pseudomonas syringae pv. tomato str. DC3000, complete genome79.6507 %Subject → Query31.4169
NC_008781:3688965Polaromonas naphthalenivorans CJ2, complete genome75.1961 %Subject → Query31.6517
NC_005773:4899252Pseudomonas syringae pv. phaseolicola 1448A, complete genome80.5821 %Subject ←→ Query31.6748
NC_008260:497855*Alcanivorax borkumensis SK2, complete genome76.2224 %Subject ←→ Query31.8754
NC_005773:866157*Pseudomonas syringae pv. phaseolicola 1448A, complete genome77.1967 %Subject ←→ Query31.8962
NC_002947:2157648Pseudomonas putida KT2440, complete genome77.6103 %Subject ←→ Query32.1856
NC_015458:2614108*Pusillimonas sp. T7-7 chromosome, complete genome75.9957 %Subject ←→ Query32.434
NC_004578:2560473Pseudomonas syringae pv. tomato str. DC3000, complete genome75.9283 %Subject ←→ Query32.524
NC_014008:1463795*Coraliomargarita akajimensis DSM 45221 chromosome, complete genome76.8873 %Subject ←→ Query33.08
NC_005773:5636606Pseudomonas syringae pv. phaseolicola 1448A, complete genome77.9044 %Subject ←→ Query33.1192
NC_008260:2340824*Alcanivorax borkumensis SK2, complete genome76.973 %Subject ←→ Query33.1855
NC_002932:937157Chlorobium tepidum TLS, complete genome77.9841 %Subject ←→ Query33.2928
NC_011027:136954*Chlorobaculum parvum NCIB 8327, complete genome75.2696 %Subject ←→ Query33.2989
NC_007498:3085511*Pelobacter carbinolicus DSM 2380, complete genome75.0184 %Subject ←→ Query33.6029
NC_008260:187269Alcanivorax borkumensis SK2, complete genome77.1415 %Subject ←→ Query33.6056
NC_014148:4037357*Planctomyces limnophilus DSM 3776 chromosome, complete genome75.2175 %Subject ←→ Query33.615
NC_014394:707305*Gallionella capsiferriformans ES-2 chromosome, complete genome76.0417 %Subject ←→ Query33.8765
NC_002947:4167500Pseudomonas putida KT2440, complete genome79.5435 %Subject ←→ Query34.0231
NC_008740:2905990Marinobacter aquaeolei VT8, complete genome77.3989 %Subject ←→ Query34.0247
NC_014355:2635500Candidatus Nitrospira defluvii, complete genome76.106 %Subject ←→ Query34.0877
NC_004578:2671508Pseudomonas syringae pv. tomato str. DC3000, complete genome78.7592 %Subject ←→ Query34.0893
NC_013960:2261487*Nitrosococcus halophilus Nc4 chromosome, complete genome75.2941 %Subject ←→ Query34.3552
NC_005773:4282840*Pseudomonas syringae pv. phaseolicola 1448A, complete genome78.4926 %Subject ←→ Query34.5864
NC_011027:817311*Chlorobaculum parvum NCIB 8327, complete genome75.0674 %Subject ←→ Query34.6303
NC_011060:459615Pelodictyon phaeoclathratiforme BU-1, complete genome76.3143 %Subject ←→ Query34.6364
NC_005773:4539751*Pseudomonas syringae pv. phaseolicola 1448A, complete genome76.4706 %Subject ←→ Query34.6607
NC_009138:1843998*Herminiimonas arsenicoxydans, complete genome76.5993 %Subject ←→ Query34.9668
NC_002516:3519000Pseudomonas aeruginosa PAO1, complete genome82.7819 %Subject ←→ Query35.2225
NC_008319:2335801*Synechococcus sp. CC9311, complete genome75.2849 %Subject ←→ Query35.4511
NC_013446:3147202*Comamonas testosteroni CNB-2, complete genome77.9228 %Subject ←→ Query35.8104
NC_015738:838715*Eggerthella sp. YY7918, complete genome77.4387 %Subject ←→ Query36.3913
NC_008344:1*Nitrosomonas eutropha C91, complete genome75.72 %Subject ←→ Query36.7971
NC_012559:2663747*Laribacter hongkongensis HLHK9, complete genome77.9902 %Subject ←→ Query37.0147
NC_005773:1135374Pseudomonas syringae pv. phaseolicola 1448A, complete genome77.7696 %Subject ←→ Query37.2379
NC_005085:1269787*Chromobacterium violaceum ATCC 12472, complete genome75.4657 %Subject ←→ Query37.3187
NC_008750:1253354Shewanella sp. W3-18-1, complete genome76.9026 %Subject ←→ Query37.3244
NC_007645:2181739*Hahella chejuensis KCTC 2396, complete genome76.9026 %Subject ←→ Query37.3602
NC_007005:4515853Pseudomonas syringae pv. syringae B728a, complete genome78.2353 %Subject ←→ Query37.5214
NC_015424:4251369*Aeromonas veronii B565 chromosome, complete genome75.7629 %Subject ←→ Query37.9013
NC_011059:65414*Prosthecochloris aestuarii DSM 271, complete genome75.0123 %Subject ←→ Query38.0058
NC_008319:571821*Synechococcus sp. CC9311, complete genome76.4369 %Subject ←→ Query38.3888
NC_008344:811386*Nitrosomonas eutropha C91, complete genome78.8235 %Subject ←→ Query38.962
NC_008740:1484531*Marinobacter aquaeolei VT8, complete genome75.0123 %Subject ←→ Query38.9626
NC_007645:6096345*Hahella chejuensis KCTC 2396, complete genome75.4442 %Subject ←→ Query39.3707
NC_005085:2014987Chromobacterium violaceum ATCC 12472, complete genome76.25 %Subject ←→ Query39.4063
NC_008463:2017607*Pseudomonas aeruginosa UCBPP-PA14, complete genome82.5888 %Subject ←→ Query39.6255
NC_007963:1908964Chromohalobacter salexigens DSM 3043, complete genome76.2929 %Subject ←→ Query39.8841
NC_012032:1827244Chloroflexus sp. Y-400-fl, complete genome75.5147 %Subject ←→ Query40.4538
NC_013959:1059004Sideroxydans lithotrophicus ES-1 chromosome, complete genome75.769 %Subject ←→ Query40.494
NC_011027:1971580Chlorobaculum parvum NCIB 8327, complete genome78.4375 %Subject ←→ Query41.2828
NC_010175:1825878Chloroflexus aurantiacus J-10-fl, complete genome75.5024 %Subject ←→ Query41.5196
NC_008260:1015447Alcanivorax borkumensis SK2, complete genome77.6532 %Subject ←→ Query41.6943
NC_007513:513806*Synechococcus sp. CC9902, complete genome75.6097 %Subject ←→ Query41.7857
NC_007516:413159*Synechococcus sp. CC9605, complete genome76.5993 %Subject ←→ Query42.2379
NC_012559:2563922Laribacter hongkongensis HLHK9, complete genome77.7819 %Subject ←→ Query42.4755
NC_013173:3679326Desulfomicrobium baculatum DSM 4028, complete genome77.1477 %Subject ←→ Query42.5287
NC_004129:5846415*Pseudomonas fluorescens Pf-5, complete genome76.0049 %Subject ←→ Query43.8792
NC_013446:4723380*Comamonas testosteroni CNB-2, complete genome75.2145 %Subject ←→ Query44.641
NC_005085:4335333Chromobacterium violaceum ATCC 12472, complete genome79.9786 %Subject ←→ Query45.045
NC_012559:1064821Laribacter hongkongensis HLHK9, complete genome75.3309 %Subject ←→ Query45.2624
NC_015424:3112637*Aeromonas veronii B565 chromosome, complete genome78.2169 %Subject ←→ Query46.0215
NC_005070:1588419*Synechococcus sp. WH 8102, complete genome75.4259 %Subject ←→ Query47.0209
NC_014532:1579419Halomonas elongata DSM 2581, complete genome79.9142 %Subject ←→ Query47.4096
NC_007516:1439537*Synechococcus sp. CC9605, complete genome76.1826 %Subject ←→ Query47.9752
NC_007516:1086948*Synechococcus sp. CC9605, complete genome77.0588 %Subject ←→ Query48.4699
NC_007516:2277910*Synechococcus sp. CC9605, complete genome78.6183 %Subject ←→ Query50.5095
NC_012660:1804610*Pseudomonas fluorescens SBW25 chromosome, complete genome76.8045 %Subject ← Query54.2743