Pre_GI Gene

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Host: NC_008260 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008260:2442000 Alcanivorax borkumensis SK2, complete genome

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
244221924442882070TonB-dependent receptorQuickGO ontologyBLASTP
244436324456701308hypothetical proteinBLASTP
24458332446351519hypothetical proteinBLASTP
24465122446985474transcriptional regulator AraC familyQuickGO ontology
244698624483831398sodium solute transporter family proteinQuickGO ontologyBLASTP
24488282449256429hypothetical proteinBLASTP
24501232451094972hypothetical proteinBLASTP
24512582452187930hypothetical proteinBLASTP
245236424533861023TRAP dicarboxylate transporter extracellular solute binding proteinQuickGO ontologyBLASTP
245349424547741281TRAP-type C4-dicarboxylate transport systemlarge permease componentQuickGO ontologyBLASTP
24548262455449624TRAP-C4-dicarboxylate transport system small permeaseQuickGO ontologyBLASTP
24557182456302585transcriptional regulator MarR familyQuickGO ontologyBLASTP
24563072456849543DABA acetyltransferaseQuickGO ontologyBLASTP
245689624582151320diaminobutyrate-pyruvate aminotransferaseQuickGO ontologyBLASTP
24582832458681399Ectoine synthaseQuickGO ontologyBLASTP
245877524599801206hypothetical proteinBLASTP
24605732461223651transcriptional regulatory protein degu protease production enhancer proteinQuickGO ontologyBLASTP
246149324649603468Na-solute symportersensory box histidinekinase putativeQuickGO ontologyBLASTP